/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-05-02 04:56:29,457::INFO::Pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.png'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-05-02 04:56:29,473::INFO::Pipeline 'morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM.png'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-05-02 04:56:29,545::INFO::Pipeline 'morphologist.capsul.spmnormalization.SPMNormalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMNormalization.png'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-05-02 04:56:29,575::INFO::Pipeline 'morphologist.capsul.spmnormalization.SPMNormalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMNormalization.png'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-05-02 04:56:29,621::INFO::Pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.png'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-05-02 04:56:29,651::INFO::Pipeline 'morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.png'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-05-02 04:56:29,698::INFO::Pipeline 'morphologist.capsul.axon.sulcilabelling.SulciLabelling' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabelling.SulciLabelling.png'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-05-02 04:56:29,761::INFO::Pipeline 'morphologist.capsul.axon.normalization.Normalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalization.Normalization.png'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-05-02 04:56:29,761::INFO::Summary: '14' files written for module 'capsul'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-05-02 04:56:30,198::INFO::Pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.png'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-05-02 04:56:30,291::INFO::Pipeline 'morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.png'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:30,299::INFO::Found '14' pipeline(s) in 'morphologist.capsul'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:30,299::INFO::Found '38' process(es) in 'morphologist.capsul'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:30,299::INFO::Processing pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-05-02 04:56:30,392::INFO::Pipeline 'morphologist.capsul.axon.normalization.Normalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalization.Normalization.png'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-05-02 04:56:30,392::INFO::Summary: '14' files written for module 'capsul'.
writing output... [ 66%] pyaims_aimsalgo
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:30,858::INFO::Found '14' pipeline(s) in 'morphologist.capsul'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:30,858::INFO::Found '38' process(es) in 'morphologist.capsul'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:30,858::INFO::Processing pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-05-02 04:56:31,594::ERROR::Traceback (most recent call last):
File "/casa/host/src/capsul/5.1/capsul/qt_apps/utils/find_pipelines.py", line 138, in find_pipeline_and_process
__import__(sub_sub_module_name)
File "/casa/host/build/python/deepsulci/pattern_classification/capsul/svm_training.py", line 8, in <module>
from ..method.svm import SVMPatternClassification
File "/casa/host/build/python/deepsulci/pattern_classification/method/svm.py", line 11, in <module>
from pcl import registration as reg
ImportError: cannot import name 'registration' from 'pcl' (/usr/lib/python3/dist-packages/pcl/__init__.py)
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-05-02 04:56:31,594::ERROR::Can't load module deepsulci.pattern_classification.capsul.svm_training
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-05-02 04:56:31,594::ERROR::Traceback (most recent call last):
File "/casa/host/src/capsul/5.1/capsul/qt_apps/utils/find_pipelines.py", line 138, in find_pipeline_and_process
__import__(sub_sub_module_name)
File "/casa/host/build/python/deepsulci/pattern_classification/capsul/svm_labeling.py", line 7, in <module>
from ..method.svm import SVMPatternClassification
File "/casa/host/build/python/deepsulci/pattern_classification/method/svm.py", line 11, in <module>
from pcl import registration as reg
ImportError: cannot import name 'registration' from 'pcl' (/usr/lib/python3/dist-packages/pcl/__init__.py)
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-05-02 04:56:31,594::ERROR::Can't load module deepsulci.pattern_classification.capsul.svm_labeling
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-05-02 04:56:31,595::INFO::Found '0' pipeline(s) in 'deepsulci.pattern_classification.capsul'.
writing output... [100%] pyaims_modules_api
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.doit:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.doit:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.ref:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.setRef:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.ref:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.setRef:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.ref:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.setRef:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.ref:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.setRef:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.ref:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.setRef:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.ref:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.setRef:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.ref:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.setRef:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.ref:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.setRef:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_DOUBLE.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_DOUBLE.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_FLOAT.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_HSV.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_POINT3DF.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGB.reset:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGB.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGBA.reset:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGBA.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S16.reset:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S16.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S32.reset:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S32.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U16.reset:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U16.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U32.reset:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U32.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U8.reset:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U8.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aims/lazy_read_data.py:docstring of soma.aims.lazy_read_data.LazyReadData:1: WARNING: more than one target found for cross-reference 'AllocatorContext': soma.aims.carto.AllocatorContext, soma.aims.carto.carto.AllocatorContext
/casa/host/build/python/soma/aimsalgo/lazy_resample_volume.py:docstring of soma.aimsalgo.lazy_resample_volume.LazyResampleVolume:1: WARNING: more than one target found for cross-reference 'aims.AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/sulci/graph_pointcloud.py:docstring of soma.aimsalgo.sulci.graph_pointcloud.build_split_graph:1: WARNING: more than one target found for cross-reference 'aims.Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/sulci/graph_pointcloud.py:docstring of soma.aimsalgo.sulci.graph_pointcloud.build_split_graph:1: WARNING: more than one target found for cross-reference 'aims.Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
generating indices... genindex py-modindex done
copying linked files...
copying notebooks ...
highlighting module code... [ 3%] aimssip
highlighting module code... [ 6%] builtins
highlighting module code... [ 9%] soma.aims
highlighting module code... [ 12%] soma.aims.aimssip
highlighting module code... [ 16%] soma.aims.apctools
highlighting module code... [ 19%] soma.aims.colormaphints
highlighting module code... [ 22%] soma.aims.filetools
highlighting module code... [ 25%] soma.aims.fslTransformation
highlighting module code... [ 29%] soma.aims.gltf_io
highlighting module code... [ 32%] soma.aims.graph_comparison
highlighting module code... [ 35%] soma.aims.labelstools
highlighting module code... [ 38%] soma.aims.lazy_read_data
highlighting module code... [ 41%] soma.aims.meshSplit
highlighting module code... [ 45%] soma.aims.spmnormalizationreader
highlighting module code... [ 48%] soma.aims.texturetools
highlighting module code... [ 51%] soma.aims.volumetools
highlighting module code... [ 54%] soma.aimsalgo
highlighting module code... [ 58%] soma.aimsalgo.lazy_resample_volume
highlighting module code... [ 61%] soma.aimsalgo.mesh_coordinates_sphere_resampling
highlighting module code... [ 64%] soma.aimsalgo.mesh_skeleton
highlighting module code... [ 67%] soma.aimsalgo.meshwatershedtools
highlighting module code... [ 70%] soma.aimsalgo.polyfit
highlighting module code... [ 74%] soma.aimsalgo.sulci.graph_pointcloud
highlighting module code... [ 77%] soma.aimsalgo.t1mapping
highlighting module code... [ 80%] soma.aimsalgo.texture_cleaning
highlighting module code... [ 83%] soma.importer
highlighting module code... [ 87%] soma.wip.aimsalgo.foldsgraphthickness
highlighting module code... [ 90%] soma.wip.aimsalgo.moment.moment
highlighting module code... [ 93%] soma.wip.aimsalgo.samplables.superquadricsamplable
highlighting module code... [ 96%] soma.wip.aimsalgo.transform.bendingtransform
highlighting module code... [100%] soma.wip.aimsalgo.transform.taperingtransform
writing additional pages... search done
copying downloadable files... [100%] ../../../../../../build/build_files/aims-free/pyaims/python/pyaims_tutorial_nb.ipynb
copying static files... done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 264 warnings.
The HTML pages are in ../../../../share/doc/pyaims-5.1/sphinx.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:32,451::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline'...
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/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,397::INFO::Writing index at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/index.rst'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,398::INFO::pipeline: '14' files written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/pipeline.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,398::INFO::Processing pipeline 'morphologist.capsul.axon.acpcorientation.AcpcOrientation'...
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/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,416::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingann.SulciLabellingANN'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,417::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamglobal.SulciLabellingSPAMGlobal'...
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/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,418::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov'...
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/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,427::INFO::Processing pipeline 'morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,427::INFO::Processing pipeline 'morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,428::INFO::Writing index at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/process/index.rst'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,428::INFO::process: '38' files written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/process.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,428::INFO::Writing module 'capsul' index at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/index.rst'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,428::INFO::Index: an index has been written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,921::INFO::Processing pipeline 'morphologist.capsul.spmnormalization.SPMNormalization'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,933::INFO::Processing pipeline 'morphologist.capsul.spmnormalization.SPMnormalizationPipeline'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,943::INFO::Writing index at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/index.rst'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,943::INFO::pipeline: '14' files written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,943::INFO::Processing pipeline 'morphologist.capsul.axon.acpcorientation.AcpcOrientation'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,944::INFO::Processing pipeline 'morphologist.capsul.axon.aimsconverter.AimsConverter'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,945::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationtoaims.BaladinNormalizationToAims'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,946::INFO::Processing pipeline 'morphologist.capsul.axon.brainsegmentation.BrainSegmentation'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,946::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationtoaims.FSLnormalizationToAims'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,947::INFO::Processing pipeline 'morphologist.capsul.axon.greywhiteclassificationhemi.GreyWhiteClassificationHemi'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,948::INFO::Processing pipeline 'morphologist.capsul.axon.greywhitemesh.GreyWhiteMesh'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,948::INFO::Processing pipeline 'morphologist.capsul.axon.greywhitetopology.GreyWhiteTopology'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,948::INFO::Processing pipeline 'morphologist.capsul.axon.histoanalysis.HistoAnalysis'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,949::INFO::Processing pipeline 'morphologist.capsul.axon.importt1mri.ImportT1MRI'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,950::INFO::Processing pipeline 'morphologist.capsul.axon.morphologistprocess.morphologistProcess'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,953::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_aimsmiregister.normalization_aimsmiregister'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,954::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_baladin.Normalization_Baladin'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,955::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_fsl_reinit.Normalization_FSL_reinit'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,955::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_spm_reinit.Normalization_SPM_reinit'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,956::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_t1_spm12_reinit.normalization_t1_spm12_reinit'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,956::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_t1_spm8_reinit.normalization_t1_spm8_reinit'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,957::INFO::Processing pipeline 'morphologist.capsul.axon.pialmesh.PialMesh'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,958::INFO::Processing pipeline 'morphologist.capsul.axon.reorientanatomy.ReorientAnatomy'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,958::INFO::Processing pipeline 'morphologist.capsul.axon.scalpmesh.ScalpMesh'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,959::INFO::Processing pipeline 'morphologist.capsul.axon.skullstripping.skullstripping'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,959::INFO::Processing pipeline 'morphologist.capsul.axon.splitbrain.SplitBrain'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,960::INFO::Processing pipeline 'morphologist.capsul.axon.spmsn3dtoaims.SPMsn3dToAims'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,961::INFO::Processing pipeline 'morphologist.capsul.axon.sulcigraph.SulciGraph'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,962::INFO::Processing pipeline 'morphologist.capsul.axon.sulcigraphmorphometrybysubject.sulcigraphmorphometrybysubject'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,962::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingann.SulciLabellingANN'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,963::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamglobal.SulciLabellingSPAMGlobal'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,963::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamlocal.SulciLabellingSPAMLocal'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,964::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,965::INFO::Processing pipeline 'morphologist.capsul.axon.sulciskeleton.SulciSkeleton'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,965::INFO::Processing pipeline 'morphologist.capsul.axon.t1biascorrection.T1BiasCorrection'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,967::INFO::Processing pipeline 'morphologist.capsul.axon.talairachtransformation.TalairachTransformation'...
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/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,973::INFO::Processing pipeline 'morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel'...
generating CAPSUL processes docs...
['/usr/bin/python3', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'morphologist.capsul', '-o', '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist', '--schema']
loading pickled environment... /casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,973::INFO::Processing pipeline 'morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,974::INFO::Writing index at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/process/index.rst'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,974::INFO::process: '38' files written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/process.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,974::INFO::Writing module 'capsul' index at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/index.rst'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:33,974::INFO::Index: an index has been written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul.
done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.1/sphinx/objects.inv...
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loading intersphinx inventory from doc/morphologist-ui-5.1/objects.inv...
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory 'doc/morphologist-ui-5.1/objects.inv' not fetchable due to <class 'FileNotFoundError'>: [Errno 2] No such file or directory: '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/doc/morphologist-ui-5.1/objects.inv'
[autosummary] generating autosummary for: index.rst, process_docs/morphologist/capsul/index.rst, process_docs/morphologist/capsul/pipeline/index.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst, ..., process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulciskeleton.SulciSkeleton.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.t1biascorrection.T1BiasCorrection.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformation.TalairachTransformation.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst, process_docs/morphologist/capsul/process/morphologist.capsul.import_t1_mri.ImportT1Mri.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_simple.MorphologistSimple.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_viewer.MorphologistView.rst, process_docs/morphologist/capsul/process/morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel.rst, process_docs/morphologist/capsul/process/morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst, sulpated.rst
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 55 source files that are out of date
updating environment: 0 added, 55 changed, 0 removed
reading sources... [ 1%] process_docs/morphologist/capsul/index
reading sources... [ 3%] process_docs/morphologist/capsul/pipeline/index
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reading sources... [ 9%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation
generating CAPSUL processes docs...
['/usr/bin/python3', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'morphologist.capsul', '-o', '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist', '--schema']
loading pickled environment... reading sources... [ 10%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline
reading sources... [ 12%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization
reading sources... [ 14%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped
reading sources... [ 16%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline
reading sources... [ 18%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.sulcilabelling.SulciLabelling
reading sources... [ 20%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM
reading sources... [ 21%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLNormalization
reading sources... [ 23%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline
done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.1/sphinx/objects.inv...
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reading sources... [ 38%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.brainsegmentation.BrainSegmentation
reading sources... [ 40%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.fslnormalizationtoaims.FSLnormalizationToAims
reading sources... [ 41%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhiteclassificationhemi.GreyWhiteClassificationHemi
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reading sources... [ 45%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhitetopology.GreyWhiteTopology
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:35,013::ERROR::Traceback (most recent call last):
File "/casa/host/src/capsul/5.1/capsul/qt_apps/utils/find_pipelines.py", line 138, in find_pipeline_and_process
__import__(sub_sub_module_name)
File "/casa/host/build/python/deepsulci/pattern_classification/capsul/svm_training.py", line 8, in <module>
from ..method.svm import SVMPatternClassification
File "/casa/host/build/python/deepsulci/pattern_classification/method/svm.py", line 11, in <module>
from pcl import registration as reg
ImportError: cannot import name 'registration' from 'pcl' (/usr/lib/python3/dist-packages/pcl/__init__.py)
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:35,014::ERROR::Can't load module deepsulci.pattern_classification.capsul.svm_training
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:35,014::ERROR::Traceback (most recent call last):
File "/casa/host/src/capsul/5.1/capsul/qt_apps/utils/find_pipelines.py", line 138, in find_pipeline_and_process
__import__(sub_sub_module_name)
File "/casa/host/build/python/deepsulci/pattern_classification/capsul/svm_labeling.py", line 7, in <module>
from ..method.svm import SVMPatternClassification
File "/casa/host/build/python/deepsulci/pattern_classification/method/svm.py", line 11, in <module>
from pcl import registration as reg
ImportError: cannot import name 'registration' from 'pcl' (/usr/lib/python3/dist-packages/pcl/__init__.py)
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:35,014::ERROR::Can't load module deepsulci.pattern_classification.capsul.svm_labeling
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:35,014::INFO::Found '0' pipeline(s) in 'deepsulci.pattern_classification.capsul'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:35,014::INFO::Found '4' process(es) in 'deepsulci.pattern_classification.capsul'.
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/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:35,017::INFO::Writing index at location '/casa/host/src/morphologist/morpho-deepsulci/5.1/sphinx/process_docs/deepsulci/pattern_classification/process/index.rst'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:35,018::INFO::process: '4' files written for module 'pattern_classification' at location /casa/host/src/morphologist/morpho-deepsulci/5.1/sphinx/process_docs/deepsulci/pattern_classification/process.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:35,018::INFO::Writing module 'pattern_classification' index at location '/casa/host/src/morphologist/morpho-deepsulci/5.1/sphinx/process_docs/deepsulci/pattern_classification/index.rst'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-05-02 04:56:35,018::INFO::Index: an index has been written for module 'pattern_classification' at location /casa/host/src/morphologist/morpho-deepsulci/5.1/sphinx/process_docs/deepsulci/pattern_classification.
[autosummary] generating autosummary for: index.rst, process_docs/morphologist/capsul/index.rst, process_docs/morphologist/capsul/pipeline/index.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst, ..., process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulciskeleton.SulciSkeleton.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.t1biascorrection.T1BiasCorrection.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformation.TalairachTransformation.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst, process_docs/morphologist/capsul/process/morphologist.capsul.import_t1_mri.ImportT1Mri.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_simple.MorphologistSimple.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_viewer.MorphologistView.rst, process_docs/morphologist/capsul/process/morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel.rst, process_docs/morphologist/capsul/process/morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst
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/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst:70: WARNING: duplicate label morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_outputs, other instance in /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst:30: WARNING: duplicate label morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_inputs, other instance in /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst
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['/usr/bin/python3', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'deepsulci.sulci_labeling.capsul', '-o', '/casa/host/src/morphologist/morpho-deepsulci/5.1/sphinx/process_docs/deepsulci', '--schema']
['/usr/bin/python3', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'deepsulci.pattern_classification.capsul', '-o', '/casa/host/src/morphologist/morpho-deepsulci/5.1/sphinx/process_docs/deepsulci', '--schema']
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[autosummary] generating autosummary for: api.rst, index.rst, process_docs/deepsulci/pattern_classification/index.rst, process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_labeling.PatternDeepLabeling.rst, process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_training.PatternDeepTraining.rst, process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_labeling.PatternSnipeLabeling.rst, process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_training.PatternSnipeTraining.rst, process_docs/deepsulci/pattern_classification/process/index.rst, process_docs/deepsulci/sulci_labeling/index.rst, process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation.rst, process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling.rst, process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.training.SulciDeepTraining.rst, process_docs/deepsulci/sulci_labeling/process/index.rst
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/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst:30: WARNING: duplicate label morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_inputs, other instance in /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst:66: WARNING: duplicate label morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_outputs, other instance in /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst
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* ImportError: cannot import name 'registration' from 'pcl' (/usr/lib/python3/dist-packages/pcl/__init__.py)
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bv_maker summary:
OK step doc: /casa/host/build, started: 2025/05/02 04:56, stopped: 2025/05/02 04:59
All went good.
Finished: SUCCESS
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