Started
Running as brainvisa
----------------------------------------
$ /usr/bin/python3 /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/src/development/casa-distro/master/bin/casa_distro bv_maker name=cea-master-5.3 -- doc
----------------------------------------
Building docs in directory: /casa/host/build
$ make -j12 -l12 doc
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Running Sphinx v6.2.1
Running Sphinx v6.2.1
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Running Sphinx v6.2.1
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Running Sphinx v6.2.1
loading pickled environment... loading pickled environment... done
done
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
loading intersphinx inventory from https://docs.enthought.com/traits/objects.inv...
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 13 source files that are out of date
updating environment: 0 added, 0 changed, 0 removed
reading sources...
looking for now-outdated files... none found
preparing documents... done
writing output... [ 7%] MPI_workflow_runner
loading pickled environment... [autosummary] generating autosummary for: api.rst, index.rst
done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.2/sphinx/objects.inv...
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv' not fetchable due to <class 'FileNotFoundError'>: [Errno 2] No such file or directory: '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv'
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/aimsdata-5.2/user_doc/objects.inv...
loading intersphinx inventory from https://docs.python.org/2.7/objects.inv...
writing output... [ 15%] changelog
loading pickled environment... writing output... [ 23%] changes_swf3
loading pickled environment... loading pickled environment... done
loading pickled environment... loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.2/sphinx/objects.inv...
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv' not fetchable due to <class 'FileNotFoundError'>: [Errno 2] No such file or directory: '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv'
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/aimsdata-5.2/user_doc/objects.inv...
loading intersphinx inventory from https://docs.python.org/2.7/objects.inv...
done
loading intersphinx inventory from /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/build/share/doc/soma-base-5.2/sphinx/objects.inv...
loading intersphinx inventory from /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/build/share/doc/pyaims-5.2/sphinx/objects.inv...
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory '/volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/build/share/doc/soma-base-5.2/sphinx/objects.inv' not fetchable due to <class 'FileNotFoundError'>: [Errno 2] No such file or directory: '/volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/build/share/doc/soma-base-5.2/sphinx/objects.inv'
loading intersphinx inventory from /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
writing output... [ 30%] client_API
loading pickled environment... done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.3/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/soma-workflow-3.3/sphinx/objects.inv...
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.3/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/aimsdata-5.2/user_doc/objects.inv...
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.2/sphinx/objects.inv...
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv' not fetchable due to <class 'FileNotFoundError'>: [Errno 2] No such file or directory: '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv'
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/soma-workflow-3.3/sphinx/objects.inv...
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
writing output... [ 38%] concepts
writing output... [ 46%] errors_troubleshooting
loading pickled environment... writing output... [ 53%] examples
done
[autosummary] generating autosummary for: bv_command.rst, bv_command_help.rst, casa_distro_admin_command.rst, casa_distro_admin_command_help.rst, casa_distro_command.rst, casa_distro_command_help.rst, concepts.rst, developer.rst, index.rst, nightly.rst, technical.rst
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 11 source files that are out of date
updating environment: 0 added, 6 changed, 0 removed
reading sources... [ 16%] bv_command
writing output... [ 61%] gui
reading sources... [ 33%] bv_command_help
reading sources... [ 50%] casa_distro_admin_command
writing output... [ 69%] index
writing output... [ 76%] install_config
[autosummary] generating autosummary for: index.rst
building [mo]: targets for 0 po files that are out of date
writing output...
reading sources... [ 66%] casa_distro_admin_command_help
building [html]: targets for 1 source files that are out of date
updating environment: 0 added, 0 changed, 0 removed
reading sources...
looking for now-outdated files... none found
preparing documents... [autosummary] generating autosummary for: index.rst
building [mo]: targets for 0 po files that are out of date
writing output...
done
writing output... [100%] index
building [html]: targets for 1 source files that are out of date
updating environment: 0 added, 0 changed, 0 removed
reading sources...
looking for now-outdated files... none found
preparing documents... done
writing output... [100%] index
writing output... [ 84%] scheduler
[autosummary] generating autosummary for: aims_config.rst, aims_io.rst, changelog.rst, coordinates_systems.rst, formats.rst, index.rst, spm_format.rst, tutorial.rst
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 8 source files that are out of date
updating environment: 0 added, 0 changed, 0 removed
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preparing documents... done
writing output... [ 12%] aims_config
writing output... [ 92%] status_list
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 10 source files that are out of date
updating environment: [autosummary] generating autosummary for: index.rst
0 added, 0 changed, 0 removed
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preparing documents... writing output... [100%] workflow_creation
building [mo]: targets for 0 po files that are out of date
writing output...
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updating environment: 0 added, 0 changed, 0 removed
reading sources...
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preparing documents... done
writing output... [ 25%] aims_io
writing output... [100%] index
done
writing output... [ 10%] anatomist_manual1
[autosummary] generating autosummary for: axon_manual.rst, axon_manual2.rst, changelog.rst, connectomist_tutorial.rst, index.rst, morphologist_tutorial.rst, tutorial.rst
building [mo]: targets for 0 po files that are out of date
writing output...
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updating environment: 0 added, 0 changed, 0 removed
reading sources...
looking for now-outdated files... none found
preparing documents... done
writing output... [ 14%] axon_manual
reading sources... [ 83%] casa_distro_command
generating indices... genindex done
highlighting module code...
writing additional pages... search
generating indices... genindex done
copying static files... done
highlighting module code...
writing additional pages... search [NbConvertApp] Converting notebook /casa/host/src/capsul/master/doc/source/tutorial/capsul_tutorial.ipynb.in to notebook
done
copying images... [ 4%] images/cresyl3.png
copying images... [ 8%] images/autorad1.png
copying images... [ 13%] images/colliculus_3D.png
copying images... [ 17%] images/spm.png
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copying images... [ 34%] images/1155fig2.png
copying images... [ 39%] images/eye.png
copying images... [ 43%] images/volume_cresyl_norec.png
copying images... [ 47%] images/volume_cresyl_rec.png
copying images... [ 52%] images/volume_autorad_norec.png
copying images... [ 56%] images/volume_autorad_rec.png
copying images... [ 60%] images/pos-coupes-column.png
copying images... [ 65%] images/pos-coupes-line.png
copying images... [ 69%] images/hor-overlap.png
copying images... [ 73%] images/ver-overlap.png
copying images... [ 78%] images/scanauto.png
copying images... [ 82%] images/scancresyl.png
copying images... [ 86%] images/pos-scan.png
copying images... [ 91%] images/col_cresyl.png
copying images... [ 95%] images/col_auto.png
copying images... [100%] images/standards.png
copying static files... done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 1 warning.
The HTML pages are in ../../share/doc/soma-io-5.2.
writing output... [ 37%] changelog
/casa/host/src/morphologist/morphologist-ui/master/doc/sphinx/user/index.rst:78: WARNING: undefined label: 'study'
generating indices... genindex building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 2 source files that are out of date
updating environment: done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... 0 added, 0 changed, 0 removed
reading sources...
done
looking for now-outdated files... none found
preparing documents... build succeeded, 1 warning.
The HTML pages are in ../../share/doc/brainrat-gpl-5.2/user_doc.
done
writing output... [ 50%] api
done
highlighting module code...
writing additional pages... search done
copying images... [100%] _static/morphologist-ui.jpg
copying static files... done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 1 warning.
The HTML pages are in ../../share/doc/morphologist-ui-5.2.
writing output... [ 50%] coordinates_systems
reading sources... [100%] casa_distro_command_help
generating indices... genindex py-modindex done
highlighting module code... [ 10%] client
highlighting module code... [ 20%] client_types
highlighting module code... [ 30%] custom_jobs
highlighting module code... [ 40%] errors
highlighting module code... [ 50%] param_link_functions
writing output... [ 20%] anatomist_manual2
writing output... [ 62%] formats
writing output... [ 28%] axon_manual2
../../../src/development/casa-distro/master/doc/source/bv_command_help.rst:13: WARNING: Option list ends without a blank line; unexpected unindent.
/casa/host/src/development/casa-distro/master/doc/source/bv_command_help.rst:13: WARNING: Option list ends without a blank line; unexpected unindent.
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:40: WARNING: duplicate label casa-distro-admin-help-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:57: WARNING: duplicate label casa-distro-admin-singularity-deb-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:83: WARNING: duplicate label casa-distro-admin-create-base-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:204: WARNING: duplicate label casa-distro-admin-publish-base-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:245: WARNING: duplicate label casa-distro-admin-create-user-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:373: WARNING: duplicate label casa-distro-admin-publish-user-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:399: WARNING: duplicate label casa-distro-admin-bbi-daily-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:535: WARNING: duplicate label casa-distro-admin-local-install-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:581: WARNING: duplicate label casa-distro-admin-convert-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:63: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:117: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:219: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:263: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:388: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:461: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:542: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:585: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:40: WARNING: duplicate label casa-distro-admin-help-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:57: WARNING: duplicate label casa-distro-admin-singularity-deb-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:83: WARNING: duplicate label casa-distro-admin-create-base-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:204: WARNING: duplicate label casa-distro-admin-publish-base-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:245: WARNING: duplicate label casa-distro-admin-create-user-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:373: WARNING: duplicate label casa-distro-admin-publish-user-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:399: WARNING: duplicate label casa-distro-admin-bbi-daily-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:535: WARNING: duplicate label casa-distro-admin-local-install-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:581: WARNING: duplicate label casa-distro-admin-convert-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:63: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:117: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:219: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:263: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
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build succeeded, 67 warnings.
The HTML pages are in ../../share/doc/casa-distro-3.2.
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build succeeded, 12 warnings.
The HTML pages are in ../../share/doc/anatomist-5.2/user_doc.
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Generawriting output... [ 37%] bv_maker_help_pack
writing output... [ 41%] bv_maker_help_publish_pack
[ 4%] Built target casa-distro-sphinx
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Running Sphinx v6.2.1
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[ 4%] Create "share/doc/5.2"
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Running Sphinx v6.2.1
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ting docs for file graph/io/gprinter.h...
Generating docs for file graph/graph/graph.h...
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Generating docs for file graph/tree/tparser_python.h...
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Generating docs for namespace carto
Generating docs for compound carto::DataTypeCode< Graph >...
Generating docs for compound carto::GraphWriter_Python...
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finalizing index lists...
writing tag file...
Running plantuml with JAVA...
Running dot...
lookup cache used 1246/65536 hits=6093 misses=1714
finished...
writing output... [ 75%] compile_existing
writing output... [ 79%] configuration
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writing output... [ 83%] dependencies
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Running Sphinx v6.2.1
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Running Sphinx v6.2.1
/casa/host/src/development/brainvisa-cmake/master/doc/sphinx/cmake_functions.rst:309: WARNING: Could not lex literal_block 'set( DOXYFILE_PROJECT_NAME, "My wonderful project" ).' as "cmake". Highlighting skipped.
/casa/host/src/development/brainvisa-cmake/master/doc/sphinx/cmake_functions.rst:386: WARNING: Could not lex literal_block 'BRAINVISA_GENERATE_TARGET_NAME _variableName' as "cmake". Highlighting skipped.
/casa/host/src/development/brainvisa-cmake/master/doc/sphinx/dependencies.rst:40: WARNING: Could not lex literal_block 'BRAINVISA_DEPENDENCY( <pack_type> <dependency_type> <component> <component_pack_type> [ <version ranges> ] [BINARY_INDEPENDENT] ).' as "cmake". Highlighting skipped.
/casa/host/src/development/brainvisa-cmake/master/doc/sphinx/new_project.rst:470: WARNING: unknown document: 'bv_packaging'
/casa/host/src/development/brainvisa-cmake/master/doc/sphinx/new_project.rst:486: WARNING: unknown document: 'bv_packaging'
/casa/host/src/development/brainvisa-cmake/master/doc/sphinx/new_project.rst:278: WARNING: Could not lex literal_block 'BRAINVISA_ADD_MOC_FILES <result variable> <header files>' as "cmake". Highlighting skipped.
/casa/host/src/development/brainvisa-cmake/master/doc/sphinx/new_project.rst:286: WARNING: Could not lex literal_block 'BRAINVISA_GET_FILE_LIST_FROM_PRO( project.pro "HEADERS" _headers "SOURCES" _sources )\nBRAINVISA_ADD_MOC_FILES( _sources ${_headers} )\nadd_library( anatomist SHARED ${_sources} )\n\nThe files generated by moc will be added to the source files used to generate anatomist library.' as "cmake". Highlighting skipped.
/casa/host/src/development/brainvisa-cmake/master/doc/sphinx/new_project.rst:298: WARNING: Could not lex literal_block 'BRAINVISA_ADD_TRANSLATION <source_share_dir> <dest_share_dir> <component>' as "cmake". Highlighting skipped.
/casa/host/src/development/brainvisa-cmake/master/doc/sphinx/new_project.rst:377: WARNING: Could not lex literal_block 'SET( DOXYFILE_PROJECT_NAME, "My wonderful project" ).' as "cmake". Highlighting skipped.
/casa/host/src/development/brainvisa-cmake/master/doc/sphinx/new_project.rst:506: WARNING: Could not lex literal_block 'BRAINVISA_INSTALL' as "cmake". Highlighting skipped.
/casa/host/src/development/brainvisa-cmake/master/doc/sphinx/testing_monitoring.rst:52: WARNING: undefined label: 'package_directory'
/casa/host/src/development/brainvisa-cmake/master/doc/sphinx/testing_monitoring.rst:232: WARNING: undefined label: 'package_directory'
generating indices... genindex done
highlighting module code...
writing additional pages... search
WARNING: autodoc: failed to import module 'info' from module 'populse_db'; the following exception was raised:
No module named 'populse_db.info'
looking for now-outdated files... none found
pickling environment... loading pickled environment... done
copying static files... done
checking consistency... /casa/host/src/populse/populse_db/master/docs/source/tutorial.rst: WARNING: document isn't included in any toctree
done
preparing documents... done
writing output... [ 14%] documentation
done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 12 warnings.
The HTML pages are in ../../share/doc/brainvisa-cmake-6.0.
writing output... [ 28%] index
Running Sphinx v6.2.1
Running Sphinx v6.2.1
writing output... [ 42%] modules
WARNING: html_static_path entry '_static' does not exist
loading pickled environment... writing output... [ 57%] populse_db
done
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.2/sphinx/objects.inv...
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 23 source files that are out of date
updating environment: 0 added, 11 changed, 0 removed
reading sources... [ 9%] api/api
writing output... [ 71%] populse_db.engine
[ 4%] Built target brainvisa-cmake-usrsphinx
[ 4%] Create "share/doc/5.2"
writing output... [ 85%] tutorial
QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/tmp/runtime-a-sac-ns-brainvisa'
writing output... [100%] user
[ 4%] Built target brainrat-gpl-devdoc
generating indices... genindex [ 4%] Create "share/doc/5.2"
py-modindex done
writing additional pages... search done
copying images... [ 33%] ../pictures/test_db_collection.png
copying images... [ 66%] ../pictures/test_db_field.png
copying images... [100%] ../pictures/test_db_profile.png
copying static files... [ 4%] Built target constellation-gpl-devdoc
done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 3 warnings.
The HTML pages are in ../../share/doc/populse-db-3.0.
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 1 source files that are out of date
updating environment: 0 added, 0 changed, 0 removed
reading sources...
looking for now-outdated files... none found
preparing documents... done
writing output... [100%] index
[ 4%] Create "share/doc/5.2"
loading pickled environment... done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.3/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/aimsdata-5.2/user_doc/objects.inv...
[ 4%] Built target cortical_surface-gpl-devdoc
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
[ 4%] Create "share/doc/5.2"
[ 4%] Built target brainvisa_freesurfer-devdoc
reading sources... [ 18%] api/attributes
[ 4%] Built target Brainvisa-doc
generating indices... genindex [ 4%] Built target neuro-forge-doc
done
highlighting module code...
writing additional pages... search done
copying static files... done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
[ 4%] Built target brainvisa-share-doc
build succeeded, 1 warning.
The HTML pages are in ../../../share/doc/aimsdata-5.2/dev_doc.
[ 4%] Writing documentation to /casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/doc...
warning: Tag 'SYMBOL_CACHE_SIZE' at line 295 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'SHOW_DIRECTORIES' at line 479 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'COLS_IN_ALPHA_INDEX' at line 750 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'HTML_ALIGN_MEMBERS' at line 805 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'XML_SCHEMA' at line 1142 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'XML_DTD' at line 1148 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'PERL_PATH' at line 1313 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'MSCGEN_PATH' at line 1335 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value
Using the default: a4!
warning: doxygen no longer ships with the FreeSans font.
You may want to clear or change DOT_FONTNAME.
Otherwise you run the risk that the wrong font is being used for dot generated graphs.
warning: source '/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/example' is not a readable file or directory... skipping.
[ 4%] Built target populse-db-sphinx
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:500: warning: include file stdint.h not found, perhaps you forgot to add its directory to INCLUDE_PATH?
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1469: warning: Reached end of file while still inside a (nested) comment. Nesting level 2 (probable line reference: 1443, 1437)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:501: warning: missing title after \defgroup NIFTI1_DATATYPES
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:541: warning: missing title after \defgroup NIFTI1_DATATYPE_ALIASES
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:703: warning: missing title after \defgroup NIFTI1_INTENT_CODES
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1189: warning: missing title after \defgroup NIFTI1_XFORM_CODES
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1253: warning: missing title after \defgroup NIFTI1_UNITS
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1394: warning: missing title after \defgroup NIFTI1_SLICE_ORDER
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:36: warning: include file stdint.h not found, perhaps you forgot to add its directory to INCLUDE_PATH?
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:40: warning: Compound cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:65: warning: Compound cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:43: warning: Compound cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:67: warning: Compound cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:61: warning: Compound cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:51: warning: Compound cifti::CiftiBrainModelsMap::SurfaceMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:56: warning: Compound cifti::CiftiBrainModelsMap::VolumeMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:102: warning: Compound cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:111: warning: Compound cifti::CiftiFile::WriteImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:42: warning: Compound cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:38: warning: Compound cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:44: warning: Compound cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:47: warning: Compound cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:40: warning: Compound cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:35: warning: Compound cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:37: warning: Compound cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Compact3DLookup.h:37: warning: Compound cifti::Compact3DLookup is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:39: warning: Compound cifti::CompactLookup is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:76: warning: Compound cifti::CompactLookup::const_iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:48: warning: Compound cifti::CompactLookup::iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:37: warning: Compound cifti::ConstFloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:48: warning: Compound cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:39: warning: Compound cifti::Label is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:44: warning: Compound cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MatrixFunctions.h:42: warning: Compound cifti::MatrixFunctions is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:44: warning: Compound cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:40: warning: Compound cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:38: warning: Compound cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:42: warning: Compound cifti::NiftiExtension is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:48: warning: Compound cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:49: warning: Compound cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:97: warning: Compound cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:36: warning: Compound cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:41: warning: Compound cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:35: warning: Compound cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:147: warning: Compound cifti::XmlAttributesResult is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:149: warning: Compound cifti::XmlAttributesResult::OptionalStatus is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.cxx:51: warning: no matching class member found for
void CiftiBrainModelsMap::addSurfaceModel(const int64_t &numberOfNodes, const cifti::StructureEnum::Enum &structure, const vector< int64_t > &nodeList)
Possible candidates:
'void cifti::CiftiBrainModelsMap::addSurfaceModel(const int64_t &numberOfNodes, const StructureEnum::Enum &structure, const float *roi=NULL)'
'void cifti::CiftiBrainModelsMap::addSurfaceModel(const int64_t &numberOfNodes, const StructureEnum::Enum &structure, const std::vector< int64_t > &nodeList)'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.cxx:236: warning: no matching class member found for
void CiftiXML::readXML(const vector< char > &text)
Possible candidates:
'void cifti::CiftiXML::readXML(XmlReader &xml)'
'void cifti::CiftiXML::readXML(const std::vector< char > &text)'
[ 4%] Built target aims-gpl-doc
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.cxx:60: warning: no matching class member found for
VolumeSpace::VolumeSpace(int64_t[3] dims[3], const vector< vector< float > > &sform)
Possible candidates:
'cifti::VolumeSpace::VolumeSpace()'
'cifti::VolumeSpace::VolumeSpace(const int64_t dims[3], const std::vector< std::vector< float > > &sform)'
'cifti::VolumeSpace::VolumeSpace(const int64_t dims[3], const float sform[12])'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.cxx:70: warning: no matching class member found for
void VolumeSpace::setSpace(int64_t[3] dims[3], const vector< vector< float > > &sform)
Possible candidates:
'void cifti::VolumeSpace::setSpace(const int64_t dims[3], const std::vector< std::vector< float > > &sform)'
'void cifti::VolumeSpace::setSpace(const int64_t dims[3], const float sform[12])'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:217: warning: no matching class member found for
void CiftiFile::getRow(float *dataOut, const vector< int64_t > &indexSelect, const bool &tolerateShortRead) const
Possible candidates:
'void cifti::CiftiFile::getRow(float *dataOut, const std::vector< int64_t > &indexSelect, const bool &tolerateShortRead=false) const'
'void cifti::CiftiFile::getRow(float *dataOut, const int64_t &index, const bool &tolerateShortRead=false) const'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:252: warning: no matching class member found for
void CiftiFile::setRow(const float *dataIn, const vector< int64_t > &indexSelect)
Possible candidates:
'void cifti::CiftiFile::setRow(const float *dataIn, const std::vector< int64_t > &indexSelect)'
'void cifti::CiftiFile::setRow(const float *dataIn, const int64_t &index)'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:330: warning: documented symbol 'CiftiMemoryImpl::CiftiMemoryImpl' was not declared or defined.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:336: warning: no uniquely matching class member found for
void CiftiMemoryImpl::getRow(float *dataOut, const vector< int64_t > &indexSelect, const bool &) const
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:346: warning: no uniquely matching class member found for
void CiftiMemoryImpl::getColumn(float *dataOut, const int64_t &index) const
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:359: warning: no uniquely matching class member found for
void CiftiMemoryImpl::setRow(const float *dataIn, const vector< int64_t > &indexSelect)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:369: warning: no uniquely matching class member found for
void CiftiMemoryImpl::setColumn(const float *dataIn, const int64_t &index)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:382: warning: documented symbol 'CiftiOnDiskImpl::CiftiOnDiskImpl' was not declared or defined.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:427: warning: documented symbol 'CiftiOnDiskImpl::CiftiOnDiskImpl' was not declared or defined.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:458: warning: no uniquely matching class member found for
void CiftiOnDiskImpl::getRow(float *dataOut, const vector< int64_t > &indexSelect, const bool &tolerateShortRead) const
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:463: warning: no uniquely matching class member found for
void CiftiOnDiskImpl::getColumn(float *dataOut, const int64_t &index) const
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:477: warning: no uniquely matching class member found for
void CiftiOnDiskImpl::setRow(const float *dataIn, const vector< int64_t > &indexSelect)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:482: warning: no uniquely matching class member found for
void CiftiOnDiskImpl::setColumn(const float *dataIn, const int64_t &index)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.cxx:51: warning: no matching class member found for
FloatMatrix::FloatMatrix(const vector< vector< float > > &matrixIn)
Possible candidates:
'cifti::FloatMatrix::FloatMatrix()'
'cifti::FloatMatrix::FloatMatrix(const std::vector< std::vector< float > > &matrixIn)'
'cifti::FloatMatrix::FloatMatrix(const int64_t &rows, const int64_t &cols)'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.cxx:281: warning: no matching class member found for
FloatMatrixRowRef::FloatMatrixRowRef(vector< float > &therow)
Possible candidates:
'cifti::FloatMatrixRowRef::FloatMatrixRowRef()'
'cifti::FloatMatrixRowRef::FloatMatrixRowRef(FloatMatrixRowRef &right)'
'cifti::FloatMatrixRowRef::FloatMatrixRowRef(std::vector< float > &therow)'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.cxx:336: warning: no matching class member found for
ConstFloatMatrixRowRef::ConstFloatMatrixRowRef(const vector< float > &therow)
Possible candidates:
'cifti::ConstFloatMatrixRowRef::ConstFloatMatrixRowRef()'
'cifti::ConstFloatMatrixRowRef::ConstFloatMatrixRowRef(const ConstFloatMatrixRowRef &right)'
'cifti::ConstFloatMatrixRowRef::ConstFloatMatrixRowRef(const std::vector< float > &therow)'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.cxx:35: warning: no matching file member found for
XmlAttributesResult cifti::XmlReader_parseAttributes(XmlReader &xml, const vector< AString > &mandatoryNames, const vector< AString > &optionalNames)
Possible candidates:
'XmlAttributesResult XmlReader_parseAttributes(XmlReader &xml, const std::vector< AString > &mandatoryNames, const std::vector< AString > &optionalNames=std::vector< AString >())' at line 162 of file /casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h
[ 8%] Built target aims-free_target_17
loading pickled environment... building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 5 source files that are out of date
updating environment: 0 added, 0 changed, 0 removed
reading sources...
looking for now-outdated files... none found
preparing documents... [ 12%] Built target soma-io_target_6
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:506: warning: Member DT_NONE (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:507: warning: Member DT_UNKNOWN (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:508: warning: Member DT_BINARY (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:509: warning: Member DT_UNSIGNED_CHAR (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:510: warning: Member DT_SIGNED_SHORT (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:511: warning: Member DT_SIGNED_INT (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:512: warning: Member DT_FLOAT (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:513: warning: Member DT_COMPLEX (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:514: warning: Member DT_DOUBLE (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:515: warning: Member DT_RGB (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:516: warning: Member DT_ALL (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:519: warning: Member DT_UINT8 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:520: warning: Member DT_INT16 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:521: warning: Member DT_INT32 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:522: warning: Member DT_FLOAT32 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:523: warning: Member DT_COMPLEX64 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:524: warning: Member DT_FLOAT64 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:525: warning: Member DT_RGB24 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:528: warning: Member DT_INT8 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:529: warning: Member DT_UINT16 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:530: warning: Member DT_UINT32 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:531: warning: Member DT_INT64 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:532: warning: Member DT_UINT64 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:533: warning: Member DT_FLOAT128 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:534: warning: Member DT_COMPLEX128 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:535: warning: Member DT_COMPLEX256 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:707: warning: Member NIFTI_INTENT_CORREL (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:895: warning: Member NIFTI_INTENT_VECTOR (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1288: warning: Member XYZT_TO_SPACE(xyzt) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1289: warning: Member XYZT_TO_TIME(xyzt) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1292: warning: Member SPACE_TIME_TO_XYZT(ss, tt) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1385: warning: Member DIM_INFO_TO_FREQ_DIM(di) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1386: warning: Member DIM_INFO_TO_PHASE_DIM(di) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1387: warning: Member DIM_INFO_TO_SLICE_DIM(di) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1390: warning: Member FPS_INTO_DIM_INFO(fd, pd, sd) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:306: warning: Member extension[4] (variable) of struct cifti::nifti1_extender is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1399: warning: Member NIFTI_SLICE_UNKNOWN (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1400: warning: Member NIFTI_SLICE_SEQ_INC (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1401: warning: Member NIFTI_SLICE_SEQ_DEC (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1402: warning: Member NIFTI_SLICE_ALT_INC (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1403: warning: Member NIFTI_SLICE_ALT_DEC (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1404: warning: Member NIFTI_SLICE_ALT_INC2 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1405: warning: Member NIFTI_SLICE_ALT_DEC2 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1: warning: Member nifti_1_header (typedef) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1: warning: Member nifti1_extender (typedef) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1: warning: Member nifti1_extension (typedef) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:55: warning: Member nifti_2_header (typedef) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/AString.h:116: warning: Member AString_split(const AString &input, const char &delim) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/AString.h:117: warning: Member AString_split_whitespace(const AString &input) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/AString.h:118: warning: Member AString_toInt(const AString &input, bool &ok) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/AString.h:119: warning: Member AString_toFloat(const AString &input, bool &ok) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:69: warning: Member operator*(const float &left, const Vector3D &right) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:159: warning: Member XmlReader_readElementText(XmlReader &xml) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:160: warning: Member XmlReader_readNextStartElement(XmlReader &xml) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:161: warning: Member XmlReader_elementName(XmlReader &xml) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:162: warning: Member XmlReader_parseAttributes(XmlReader &xml, const std::vector< AString > &mandatoryNames, const std::vector< AString > &optionalNames=std::vector< AString >()) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:163: warning: Member XmlReader_checkEndElement(XmlReader &xml, const AString &elementName) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:506: warning: Member DT_NONE (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:507: warning: Member DT_UNKNOWN (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:508: warning: Member DT_BINARY (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:509: warning: Member DT_UNSIGNED_CHAR (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:510: warning: Member DT_SIGNED_SHORT (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:511: warning: Member DT_SIGNED_INT (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:512: warning: Member DT_FLOAT (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:513: warning: Member DT_COMPLEX (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:514: warning: Member DT_DOUBLE (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:515: warning: Member DT_RGB (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:516: warning: Member DT_ALL (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:519: warning: Member DT_UINT8 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:520: warning: Member DT_INT16 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:521: warning: Member DT_INT32 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:522: warning: Member DT_FLOAT32 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:523: warning: Member DT_COMPLEX64 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:524: warning: Member DT_FLOAT64 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:525: warning: Member DT_RGB24 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:528: warning: Member DT_INT8 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:529: warning: Member DT_UINT16 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:530: warning: Member DT_UINT32 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:531: warning: Member DT_INT64 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:532: warning: Member DT_UINT64 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:533: warning: Member DT_FLOAT128 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:534: warning: Member DT_COMPLEX128 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:535: warning: Member DT_COMPLEX256 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:707: warning: Member NIFTI_INTENT_CORREL (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:895: warning: Member NIFTI_INTENT_VECTOR (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1399: warning: Member NIFTI_SLICE_UNKNOWN (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1400: warning: Member NIFTI_SLICE_SEQ_INC (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1401: warning: Member NIFTI_SLICE_SEQ_DEC (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1402: warning: Member NIFTI_SLICE_ALT_INC (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1403: warning: Member NIFTI_SLICE_ALT_DEC (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1404: warning: Member NIFTI_SLICE_ALT_INC2 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1405: warning: Member NIFTI_SLICE_ALT_DEC2 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:38: warning: Member NIFTI_INTENT_CONNECTIVITY_UNKNOWN (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:39: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:40: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_TIME (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:41: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_SERIES (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:42: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:43: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_TIME (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:44: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_SERIES (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:45: warning: Member NIFTI_INTENT_CONNECTIVITY_CONNECTIVITY_TRAJECTORY (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:46: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_TRAJECTORY (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:47: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_SCALARS (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:48: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_LABELS (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:49: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_SCALAR (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:50: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_DENSE (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:51: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_PARCELLATED (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:52: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_PARCELLATED_SERIES (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:53: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_PARCELLATED_SCALAR (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:55: warning: Member NIFTI_ECODE_CIFTI (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:46: warning: Member ModelType (enumeration) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:74: warning: Member hasVolumeData() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:75: warning: Member hasVolumeData(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:76: warning: Member hasSurfaceData(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:77: warning: Member getIndexForNode(const int64_t &node, const StructureEnum::Enum &structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:78: warning: Member getIndexForVoxel(const int64_t *ijk, StructureEnum::Enum *structureOut=NULL) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:79: warning: Member getIndexForVoxel(const int64_t &i, const int64_t &j, const int64_t &k, StructureEnum::Enum *structureOut=NULL) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:80: warning: Member getInfoForIndex(const int64_t index) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:81: warning: Member getSurfaceMap(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:82: warning: Member getFullVolumeMap() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:83: warning: Member getVolumeStructureMap(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:84: warning: Member getVolumeSpace() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:85: warning: Member getSurfaceNumberOfNodes(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:86: warning: Member getSurfaceStructureList() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:87: warning: Member getVolumeStructureList() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:88: warning: Member getNodeList(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:89: warning: Member getVoxelList(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:90: warning: Member getModelInfo() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:93: warning: Member addSurfaceModel(const int64_t &numberOfNodes, const StructureEnum::Enum &structure, const float *roi=NULL) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:94: warning: Member addSurfaceModel(const int64_t &numberOfNodes, const StructureEnum::Enum &structure, const std::vector< int64_t > &nodeList) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:95: warning: Member addVolumeModel(const StructureEnum::Enum &structure, const std::vector< int64_t > &ijkList) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:96: warning: Member setVolumeSpace(const VolumeSpace &space) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:97: warning: Member clear() (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:99: warning: Member clone() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:100: warning: Member getType() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:101: warning: Member getLength() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:102: warning: Member operator==(const CiftiMappingType &rhs) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:103: warning: Member approximateMatch(const CiftiMappingType &rhs, AString *explanation=NULL) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:104: warning: Member readXML1(XmlReader &xml) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:105: warning: Member readXML2(XmlReader &xml) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:106: warning: Member writeXML1(XmlWriter &xml) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:107: warning: Member writeXML2(XmlWriter &xml) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:69: warning: Member m_type (variable) of struct cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:70: warning: Member m_structure (variable) of struct cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:71: warning: Member m_surfaceNode (variable) of struct cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:72: warning: Member m_ijk[3] (variable) of struct cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:63: warning: Member m_type (variable) of struct cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:64: warning: Member m_structure (variable) of struct cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:65: warning: Member m_indexStart (variable) of struct cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:65: warning: Member m_indexCount (variable) of struct cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:53: warning: Member m_ciftiIndex (variable) of struct cifti::CiftiBrainModelsMap::SurfaceMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:54: warning: Member m_surfaceNode (variable) of struct cifti::CiftiBrainModelsMap::SurfaceMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:58: warning: Member m_ciftiIndex (variable) of struct cifti::CiftiBrainModelsMap::VolumeMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:59: warning: Member m_ijk[3] (variable) of struct cifti::CiftiBrainModelsMap::VolumeMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:45: warning: Member getMapMetadata(const int64_t &index) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:46: warning: Member getMapLabelTable(const int64_t &index) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:47: warning: Member getMapName(const int64_t &index) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:49: warning: Member setMapMetadata(const int64_t &index, const MetaData &md) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:50: warning: Member setMapLabelTable(const int64_t &index, const LabelTable <) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:51: warning: Member setMapName(const int64_t &index, const AString &mapName) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:52: warning: Member setLength(const int64_t &length) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:53: warning: Member clear() (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:55: warning: Member clone() const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:56: warning: Member getType() const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:57: warning: Member getLength() const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:58: warning: Member operator==(const CiftiMappingType &rhs) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:59: warning: Member approximateMatch(const CiftiMappingType &rhs, AString *explanation=NULL) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:60: warning: Member readXML1(XmlReader &xml) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:61: warning: Member readXML2(XmlReader &xml) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:62: warning: Member writeXML1(XmlWriter &xml) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:63: warning: Member writeXML2(XmlWriter &xml) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:49: warning: Member clone() const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:50: warning: Member getType() const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:51: warning: Member getLength() const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:52: warning: Member operator==(const CiftiMappingType &rhs) const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:54: warning: Member approximateMatch(const CiftiMappingType &rhs, AString *explanation=NULL) const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:55: warning: Member readXML1(XmlReader &xml)=0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:56: warning: Member readXML2(XmlReader &xml)=0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:57: warning: Member writeXML1(XmlWriter &xml) const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:58: warning: Member writeXML2(XmlWriter &xml) const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:56: warning: Member hasVolumeData() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:57: warning: Member hasSurface(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:58: warning: Member hasSurfaceData(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:59: warning: Member getVolumeSpace() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:60: warning: Member getSurfaceNumberOfNodes(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:61: warning: Member getIndexForNode(const int64_t &node, const StructureEnum::Enum &structure) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:62: warning: Member getIndexForVoxel(const int64_t *ijk) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:63: warning: Member getIndexForVoxel(const int64_t &i, const int64_t &j, const int64_t &k) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:64: warning: Member getParcelSurfaceStructures() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:65: warning: Member getParcels() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:68: warning: Member addSurface(const int64_t &numberOfNodes, const StructureEnum::Enum &structure) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:69: warning: Member setVolumeSpace(const VolumeSpace &space) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:70: warning: Member addParcel(const Parcel &parcel) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:71: warning: Member clear() (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:73: warning: Member clone() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:74: warning: Member getType() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:75: warning: Member getLength() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:76: warning: Member operator==(const CiftiMappingType &rhs) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:77: warning: Member approximateMatch(const CiftiMappingType &rhs, AString *explanation=NULL) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:78: warning: Member readXML1(XmlReader &xml) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:79: warning: Member readXML2(XmlReader &xml) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:80: warning: Member writeXML1(XmlWriter &xml) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:81: warning: Member writeXML2(XmlWriter &xml) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:52: warning: Member operator==(const Parcel &rhs) const (function) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:53: warning: Member operator!=(const Parcel &rhs) const (function) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:54: warning: Member approximateMatch(const Parcel &rhs, AString *explanation=NULL) const (function) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:49: warning: Member m_surfaceNodes (variable) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:50: warning: Member m_voxelIndices (variable) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:51: warning: Member m_name (variable) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:44: warning: Member CiftiScalarsMap(const CiftiScalarsMap &rhs) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:45: warning: Member operator=(const CiftiScalarsMap &rhs) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:46: warning: Member CiftiScalarsMap(const int64_t &length) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:48: warning: Member getMapMetadata(const int64_t &index) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:49: warning: Member getMapName(const int64_t &index) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:51: warning: Member setMapMetadata(const int64_t &index, const MetaData &mdIn) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:52: warning: Member setMapName(const int64_t &index, const AString &mapName) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:53: warning: Member setLength(const int64_t &length) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:54: warning: Member clear() (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:56: warning: Member clone() const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:57: warning: Member getType() const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:58: warning: Member getLength() const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:59: warning: Member operator==(const CiftiMappingType &rhs) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:60: warning: Member approximateMatch(const CiftiMappingType &rhs, AString *explanation=NULL) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:61: warning: Member readXML1(XmlReader &xml) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:62: warning: Member readXML2(XmlReader &xml) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:63: warning: Member writeXML1(XmlWriter &xml) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:64: warning: Member writeXML2(XmlWriter &xml) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:38: warning: Member Unit (enumeration) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:45: warning: Member getStart() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:46: warning: Member getStep() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:47: warning: Member getUnit() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:56: warning: Member CiftiSeriesMap(const int64_t &length, const float &start=0.0f, const float &step=1.0f, const Unit &unit=SECOND) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:63: warning: Member setStart(const float &start) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:64: warning: Member setStep(const float &step) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:65: warning: Member setUnit(const Unit &unit) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:66: warning: Member setLength(const int64_t &length) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:72: warning: Member clone() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:73: warning: Member getType() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:74: warning: Member getLength() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:75: warning: Member operator==(const CiftiMappingType &rhs) const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:84: warning: Member approximateMatch(const CiftiMappingType &rhs, AString *explanation=NULL) const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:101: warning: Member readXML1(XmlReader &xml) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:102: warning: Member readXML2(XmlReader &xml) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:103: warning: Member writeXML1(XmlWriter &xml) const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:104: warning: Member writeXML2(XmlWriter &xml) const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:68: warning: Member stringToUnit(const AString &string, bool &ok) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:69: warning: Member unitToString(const Unit &theUnit) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:70: warning: Member getAllUnits() (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:41: warning: Member getMajor() const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:42: warning: Member getMinor() const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:45: warning: Member CiftiVersion(const int16_t &major, const int16_t &minor) (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:46: warning: Member CiftiVersion(const AString &versionString) (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:47: warning: Member toString() const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:48: warning: Member operator<(const CiftiVersion &rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:49: warning: Member operator>(const CiftiVersion &rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:50: warning: Member operator==(const CiftiVersion &rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:51: warning: Member operator!=(const CiftiVersion &rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:52: warning: Member operator<=(const CiftiVersion &rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:53: warning: Member operator>=(const CiftiVersion &rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:57: warning: Member getNumberOfDimensions() const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:58: warning: Member getParsedVersion() const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:65: warning: Member getFileMetaData() const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:67: warning: Member getMappingType(const int &direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:68: warning: Member getBrainModelsMap(const int &direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:69: warning: Member getBrainModelsMap(const int &direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:70: warning: Member getLabelsMap(const int &direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:71: warning: Member getLabelsMap(const int &direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:72: warning: Member getParcelsMap(const int &direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:73: warning: Member getParcelsMap(const int &direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:74: warning: Member getScalarsMap(const int &direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:75: warning: Member getScalarsMap(const int &direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:76: warning: Member getSeriesMap(const int &direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:77: warning: Member getSeriesMap(const int &direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:78: warning: Member getDimensionLength(const int &direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:79: warning: Member getDimensions() const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:81: warning: Member setNumberOfDimensions(const int &num) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:82: warning: Member setMap(const int &direction, const CiftiMappingType &mapIn) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:83: warning: Member setFileMetaData(const MetaData &mdIn) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:84: warning: Member clear() (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:86: warning: Member readXML(XmlReader &xml) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:87: warning: Member readXML(const std::vector< char > &text) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:89: warning: Member writeXMLToVector(const CiftiVersion &writingVersion=CiftiVersion()) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:90: warning: Member writeXML(XmlWriter &xml, const CiftiVersion &writingVersion=CiftiVersion()) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:96: warning: Member CiftiXML(const CiftiXML &rhs) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:97: warning: Member operator=(const CiftiXML &rhs) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:98: warning: Member operator==(const CiftiXML &rhs) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:99: warning: Member operator!=(const CiftiXML &rhs) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:100: warning: Member approximateMatch(const CiftiXML &rhs) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:82: warning: Member Label(const Label &gl) (function) of class cifti::Label is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:85: warning: Member operator=(const Label &gl) (function) of class cifti::Label is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:95: warning: Member hashCode() (function) of class cifti::Label is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:133: warning: Member matches(const Label &rhs, const bool checkColor=false) const (function) of class cifti::Label is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:49: warning: Member LabelTable(const LabelTable &glt) (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:51: warning: Member operator=(const LabelTable &glt) (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:53: warning: Member matches(const LabelTable &rhs, const bool checkColors=false) const (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:55: warning: Member operator==(const LabelTable &rhs) const (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:57: warning: Member operator!=(const LabelTable &rhs) const (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:148: warning: Member createLabelsForKeys(const std::set< int32_t > &newKeys) (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:150: warning: Member writeXML(XmlWriter &xmlWriter) const (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:152: warning: Member readXml(XmlReader &xml) (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:156: warning: Member getKeys(std::vector< int32_t > &keysOut) const (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:50: warning: Member MetaData(const MetaData &o) (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:52: warning: Member operator=(const MetaData &o) (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:54: warning: Member operator==(const MetaData &rhs) const (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:56: warning: Member operator!=(const MetaData &rhs) const (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:94: warning: Member writeCiftiXML1(XmlWriter &xmlWriter) const (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:95: warning: Member writeCiftiXML2(XmlWriter &xmlWriter) const (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:96: warning: Member readCiftiXML1(XmlReader &xml) (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:97: warning: Member readCiftiXML2(XmlReader &xml) (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:47: warning: Member OrientTypes (enumeration) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:57: warning: Member VolumeSpace(const int64_t dims[3], const std::vector< std::vector< float > > &sform) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:58: warning: Member VolumeSpace(const int64_t dims[3], const float sform[12]) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:59: warning: Member setSpace(const int64_t dims[3], const std::vector< std::vector< float > > &sform) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:60: warning: Member setSpace(const int64_t dims[3], const float sform[12]) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:61: warning: Member getDims() const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:62: warning: Member getSform() const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:63: warning: Member getSpacingVectors(Vector3D &iStep, Vector3D &jStep, Vector3D &kStep, Vector3D &origin) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:64: warning: Member matchesVolumeSpace(const VolumeSpace &right) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:65: warning: Member operator==(const VolumeSpace &right) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:66: warning: Member operator!=(const VolumeSpace &right) const (function) of class cifti::VolumeSpace is not documented.
[ 12%] Built target soma-io_target_7
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:115: warning: Member indexValid(const T *indexIn) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:129: warning: Member getIndex(const int64_t &indexIn1, const int64_t &indexIn2, const int64_t &indexIn3) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:135: warning: Member getIndex(const T *indexIn) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:140: warning: Member readCiftiXML1(XmlReader &xml) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:141: warning: Member readCiftiXML2(XmlReader &xml) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:142: warning: Member writeCiftiXML1(XmlWriter &xml) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:143: warning: Member writeCiftiXML2(XmlWriter &xml) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:48: warning: Member ENDIAN (enumeration) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:73: warning: Member getCiftiXML() const (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:74: warning: Member isInMemory() const (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:78: warning: Member getDimensions() const (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:89: warning: Member setCiftiXML(const CiftiXML &xml, const bool useOldMetadata=true) (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:90: warning: Member setRow(const float *dataIn, const std::vector< int64_t > &indexSelect) (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:105: warning: Member getRow(float *dataOut, const std::vector< int64_t > &indexSelect, const bool &tolerateShortRead) const =0 (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:106: warning: Member getColumn(float *dataOut, const int64_t &index) const =0 (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:107: warning: Member isInMemory() const (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:114: warning: Member setRow(const float *dataIn, const std::vector< int64_t > &indexSelect)=0 (function) of class cifti::CiftiFile::WriteImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:115: warning: Member setColumn(const float *dataIn, const int64_t &index)=0 (function) of class cifti::CiftiFile::WriteImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:105: warning: Member getRow(float *dataOut, const std::vector< int64_t > &indexSelect, const bool &tolerateShortRead) const =0 (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:106: warning: Member getColumn(float *dataOut, const int64_t &index) const =0 (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:107: warning: Member isInMemory() const (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:103: warning: Member open(const AString &filename, const BinaryFile::OpenMode &opmode) (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:104: warning: Member close() (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:105: warning: Member seek(const int64_t &position) (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:106: warning: Member pos() (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:107: warning: Member read(void *dataOut, const int64_t &count, int64_t *numRead) (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:108: warning: Member write(const void *dataIn, const int64_t &count) (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:72: warning: Member getFilename() const (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:68: warning: Member m_fileName (variable) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:43: warning: Member OpenMode (enumeration) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:56: warning: Member open(const AString &filename, const OpenMode &opmode=READ) (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:57: warning: Member close() (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:58: warning: Member getFilename() const (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:59: warning: Member getOpenForRead() (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:60: warning: Member getOpenForWrite() (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:61: warning: Member seek(const int64_t &position) (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:62: warning: Member pos() (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:63: warning: Member read(void *dataOut, const int64_t &count, int64_t *numRead=NULL) (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:64: warning: Member write(const void *dataIn, const int64_t &count) (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:70: warning: Member open(const AString &filename, const OpenMode &opmode)=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:71: warning: Member close()=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:72: warning: Member getFilename() const (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:73: warning: Member seek(const int64_t &position)=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:74: warning: Member pos()=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:75: warning: Member read(void *dataOut, const int64_t &count, int64_t *numRead)=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:76: warning: Member write(const void *dataIn, const int64_t &count)=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:68: warning: Member m_fileName (variable) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/ByteSwapping.h:43: warning: Member swap(T &toSwap) (function) of class cifti::ByteSwapping is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/ByteSwapping.h:46: warning: Member swapArray(T *toSwap, const uint64_t &count) (function) of class cifti::ByteSwapping is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/ByteSwapping.h:48: warning: Member isBigEndian() (function) of class cifti::ByteSwapping is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:110: warning: Member end() (function) of class cifti::CompactLookup is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:111: warning: Member end() const (function) of class cifti::CompactLookup is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:83: warning: Member operator==(const const_iterator &rhs) const (function) of class cifti::CompactLookup::const_iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:90: warning: Member operator*() (function) of class cifti::CompactLookup::const_iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:96: warning: Member operator->() (function) of class cifti::CompactLookup::const_iterator is not documented.
[ 12%] Built target aimsdata-sphinx
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:55: warning: Member operator==(const iterator &rhs) const (function) of class cifti::CompactLookup::iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:62: warning: Member operator*() (function) of class cifti::CompactLookup::iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:68: warning: Member operator->() (function) of class cifti::CompactLookup::iterator is not documented.
done
writing output... [ 20%] aobj_format
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:42: warning: Member ConstFloatMatrixRowRef(const ConstFloatMatrixRowRef &right) (function) of class cifti::ConstFloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:43: warning: Member ConstFloatMatrixRowRef(const std::vector< float > &therow) (function) of class cifti::ConstFloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:44: warning: Member operator[](const int64_t &index) (function) of class cifti::ConstFloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:53: warning: Member FloatMatrixRowRef(FloatMatrixRowRef &right) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:54: warning: Member FloatMatrixRowRef(std::vector< float > &therow) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:55: warning: Member operator=(const FloatMatrixRowRef &right) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:56: warning: Member operator=(const ConstFloatMatrixRowRef &right) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:57: warning: Member operator=(const float &right) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:58: warning: Member operator[](const int64_t &index) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:73: warning: Member operator[](const int64_t &index) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:74: warning: Member operator[](const int64_t &index) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:75: warning: Member operator+=(const FloatMatrix &right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:76: warning: Member operator-=(const FloatMatrix &right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:77: warning: Member operator*=(const FloatMatrix &right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:78: warning: Member operator+=(const float &right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:79: warning: Member operator-=(const float &right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:80: warning: Member operator*=(const float &right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:81: warning: Member operator/=(const float &right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:82: warning: Member operator+(const FloatMatrix &right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:83: warning: Member operator-(const FloatMatrix &right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:84: warning: Member operator-() const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:85: warning: Member operator*(const FloatMatrix &right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:86: warning: Member operator==(const FloatMatrix &right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:87: warning: Member operator!=(const FloatMatrix &right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:131: warning: Member addVectors(const float v1[3], const float v2[3], float resultOut[3]) (function) of class cifti::MathFunctions is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:261: warning: Member isNaN(const float number) (function) of class cifti::MathFunctions is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:263: warning: Member isPosInf(const float number) (function) of class cifti::MathFunctions is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:265: warning: Member isNegInf(const float number) (function) of class cifti::MathFunctions is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:227: warning: The following parameter of cifti::MathFunctions::arraysEqual(const float a[], const float b[], const int32_t numElements) is not documented:
parameter 'numElements'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:273: warning: The following parameter of cifti::MathFunctions::compareArrays(const float a1[], const float a2[], const int32_t numElements, const float tolerance) is not documented:
parameter 'numElements'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'X' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'coordinate' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'Y' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'coordinate' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'X' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'coordinate' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'Y' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'coordinate' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:121: warning: The following parameters of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2) are not documented:
parameter 'x1'
parameter 'y1'
parameter 'x2'
parameter 'y2'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:79: warning: The following parameter of cifti::MathFunctions::normalizedCrossProduct(const float x1[], const float x2[], float resultOut[]) is not documented:
parameter 'resultOut'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:352: warning: argument 'vectorInOut' of command @param is not found in the argument list of cifti::MathFunctions::normalizeVector(double vector[3])
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:90: warning: The following parameter of cifti::MathFunctions::normalizeVector(double vector[3]) is not documented:
parameter 'vector'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:333: warning: argument 'vectorInOut' of command @param is not found in the argument list of cifti::MathFunctions::normalizeVector(float vector[3])
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:88: warning: The following parameter of cifti::MathFunctions::normalizeVector(float vector[3]) is not documented:
parameter 'vector'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:63: warning: The following parameter of cifti::MathFunctions::normalVectorDirection(const float v1[3], const float v2[3], const float v3[3], float directionOut[3]) is not documented:
parameter 'directionOut'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:47: warning: Member getDimensions() const (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:49: warning: Member resize(const std::vector< I > &dims) (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:51: warning: Member at(const std::vector< I > &pos) (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:53: warning: Member at(const std::vector< I > &pos) const (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:55: warning: Member get(const int &fullDims, const std::vector< I > &indexSelect) (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:57: warning: Member get(const int &fullDims, const std::vector< I > &indexSelect) const (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:45: warning: Member MultiDimIterator(const std::vector< T > &dimensions) (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:46: warning: Member operator++() (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:47: warning: Member operator++(int) (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:48: warning: Member operator--() (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:49: warning: Member operator--(int) (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:50: warning: Member operator*() const (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:51: warning: Member atEnd() const (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:41: warning: Member dot(const Vector3D &right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:42: warning: Member cross(const Vector3D &right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:43: warning: Member normal(float *origLength=NULL) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:44: warning: Member length() const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:45: warning: Member lengthsquared() const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:48: warning: Member Vector3D(const float &x, const float &y, const float &z) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:49: warning: Member Vector3D(const float *right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:51: warning: Member operator[](const int64_t &index) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:52: warning: Member operator[](const int64_t &index) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:53: warning: Member operator[](const int32_t &index) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:54: warning: Member operator[](const int32_t &index) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:55: warning: Member operator=(const float *right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:57: warning: Member operator+=(const Vector3D &right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:58: warning: Member operator-=(const Vector3D &right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:59: warning: Member operator*=(const float &right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:60: warning: Member operator/=(const float &right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:61: warning: Member operator+(const Vector3D &right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:62: warning: Member operator-(const Vector3D &right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:63: warning: Member operator-() const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:64: warning: Member operator*(const float &right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:65: warning: Member operator/(const float &right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:66: warning: Member operator float *() (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:39: warning: Member VoxelIJK(int64_t i, int64_t j, int64_t k) (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:41: warning: Member VoxelIJK(const T ijk[3]) (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:46: warning: Member operator<(const VoxelIJK &rhs) const (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:54: warning: Member operator==(const VoxelIJK &rhs) const (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:60: warning: Member operator!=(const VoxelIJK &rhs) const (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:37: warning: Member m_ijk[3] (variable) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:155: warning: Member mandatoryVals (variable) of struct cifti::XmlAttributesResult is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:156: warning: Member optionalVals (variable) of struct cifti::XmlAttributesResult is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:152: warning: Member present (variable) of struct cifti::XmlAttributesResult::OptionalStatus is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:153: warning: Member value (variable) of struct cifti::XmlAttributesResult::OptionalStatus is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:306: warning: Member extension[4] (variable) of struct cifti::nifti1_extender is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:44: warning: Member m_ecode (variable) of struct cifti::NiftiExtension is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:45: warning: Member m_bytes (variable) of struct cifti::NiftiExtension is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:53: warning: Member read(BinaryFile &inFile) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:54: warning: Member write(BinaryFile &outFile, const int &version=1, const bool &swapEndian=false) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:55: warning: Member canWriteVersion(const int &version) const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:56: warning: Member isSwapped() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:57: warning: Member version() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:59: warning: Member getDimensions() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:60: warning: Member getSForm() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:61: warning: Member getDataOffset() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:62: warning: Member getDataType() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:63: warning: Member getIntentCode() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:64: warning: Member getIntentName() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:65: warning: Member getDataScaling(double &mult, double &offset) const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:66: warning: Member toString() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:68: warning: Member setDimensions(const std::vector< int64_t > &dimsIn) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:69: warning: Member setSForm(const std::vector< std::vector< float > > &sForm) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:70: warning: Member setIntent(const int32_t &code, const char name[16]) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:71: warning: Member setDataType(const int16_t &type) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:72: warning: Member clearDataScaling() (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:73: warning: Member setDataScaling(const double &mult, const double &offset) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:77: warning: Member operator==(const NiftiHeader &rhs) const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:78: warning: Member operator!=(const NiftiHeader &rhs) const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:50: warning: Member m_extensions (variable) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:62: warning: Member openRead(const AString &filename) (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:63: warning: Member writeNew(const AString &filename, const NiftiHeader &header, const int &version=1, const bool &withRead=false, const bool &swapEndian=false) (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:64: warning: Member getFilename() const (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:65: warning: Member overrideDimensions(const std::vector< int64_t > &newDims) (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:66: warning: Member close() (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:67: warning: Member getHeader() const (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:68: warning: Member getDimensions() const (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:69: warning: Member getNumComponents() const (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:73: warning: Member readData(T *dataOut, const int &fullDims, const std::vector< int64_t > &indexSelect, const bool &tolerateShortRead=false) (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:75: warning: Member writeData(const T *dataIn, const int &fullDims, const std::vector< int64_t > &indexSelect) (function) of class cifti::NiftiIO is not documented.
[ 12%] Built target aims-free_target_2
[ 12%] Built target aims-free_target_10
loading pickled environment... [ 16%] Built target aims-free_target_16
[ 25%] Built target aims-free_target_31
[ 25%] Built target doxygen
done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.3/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/soma-workflow-3.3/sphinx/objects.inv...
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
[ 25%] Built target aims-free_target_14
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writing output... [ 40%] commands
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Consolidate compiler generated dependencies of target VipPreprocessing
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writing output... [ 60%] controler
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writing output... [ 80%] developer_details
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QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/tmp/runtime-a-sac-ns-brainvisa'
Attribute Qt::AA_ShareOpenGLContexts must be set before QCoreApplication is created.
writing output... [100%] index
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generating indices... genindex [ 37%] Built target cortical_surface-gpl-doc
done
highlighting module code...
writing additional pages... search done
copying images... [ 50%] ../sphinxman/images/anatomist.png
copying images... [100%] ../sphinxman/images/program.png
copying static files... [ 37%] Built target brainvisa_freesurfer-doc
done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.3/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
done
copying extra files... done
[ 37%] Built target disco-doc
dumping search index in English (code: en)... loading intersphinx inventory from /casa/host/build/share/doc/soma-workflow-3.3/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/capsul-2.6/objects.inv...
done
dumping object inventory... done
build succeeded.
The HTML pages are in ../../share/doc/anatomist-5.2/dev_doc.
[ 37%] Create "share/doc/6.0"
[ 37%] Create "share/doc/5.2"
[ 37%] Built target brainvisa-cmake-usrdoc
[ 37%] Built target aims-free-usrdoc
[autosummary] generating autosummary for: core_api.rst, index.rst
[ 37%] Create "share/doc/5.2"
[ 37%] Create "share/doc/5.2"
[ 37%] Built target anatomist-free-usrdoc
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QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/tmp/runtime-a-sac-ns-brainvisa'
[ 37%] Create "share/doc/5.2"
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[ 37%] Built target brainrat-gpl-usrdoc
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[ 37%] Create "share/doc/5.3"
[ 37%] Create "share/doc/3.2"
[ 37%] Built target casa-distro-devdoc
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[autosummary] generating autosummary for: capsul.rst, developer_manual.rst, index.rst, python.rst, python_bv_configuration.rst, python_bv_data.rst, python_bv_data_gui.rst, python_bv_processing.rst, python_bv_processing_gui.rst, python_bv_tools.rst, usecases.rst, usecases_nb.ipynb
[ 37%] Built target anatomist-free-sphinx
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[ 37%] Create "share/doc/5.2"
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reading sources... [ 27%] api/engine
Consolidate compiler generated dependencies of target ecat
Consolidate compiler generated dependencies of target cartobase_0
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:06,949::INFO::Pipeline 'morphologist.capsul.axon.normalization.Normalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalization.Normalization.png'.
Consolidate compiler generated dependencies of target neuron
[ 37%] Built target morphologist-nonfree-doc
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[ 37%] Create "share/doc/5.2"
[ 41%] Built target cartodata-doxygen
Consolidate compiler generated dependencies of target cartobase_1
[ 41%] Built target soma-io-devdoc
[ 41%] Built target cartobase_1
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:07,031::INFO::Found '15' pipeline(s) in 'morphologist.capsul'.
Consolidate compiler generated dependencies of target ecat+
Consolidate compiler generated dependencies of target neurlearn
[ 41%] Built target ecat+
Consolidate compiler generated dependencies of target neurmakenet
[ 41%] Built target neurlearn
Consolidate compiler generated dependencies of target neurpatimport
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Starting Anatomist.....
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[ 41%] Built target soma-io-doc
done
Consolidate compiler generated dependencies of target cartobase
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv...
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv' not fetchable due to <class 'FileNotFoundError'>: [Errno 2] No such file or directory: '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv'
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/aimsdata-5.2/dev_doc/objects.inv...
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
loading intersphinx inventory from https://numpy.org/doc/stable/objects.inv...
Consolidate compiler generated dependencies of target EcatVolMIProj
[ 41%] Built target cartobase
warning: Tag 'DETAILS_AT_TOP' at line 162 of file '/casa/host/build/build_files/aims-free/aimsdata/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'SHOW_DIRECTORIES' at line 408 of file '/casa/host/build/build_files/aims-free/aimsdata/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'COLS_IN_ALPHA_INDEX' at line 653 of file '/casa/host/build/build_files/aims-free/aimsdata/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'HTML_ALIGN_MEMBERS' at line 708 of file '/casa/host/build/build_files/aims-free/aimsdata/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'XML_SCHEMA' at line 948 of file '/casa/host/build/build_files/aims-free/aimsdata/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'XML_DTD' at line 954 of file '/casa/host/build/build_files/aims-free/aimsdata/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'PERL_PATH' at line 1115 of file '/casa/host/build/build_files/aims-free/aimsdata/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'MSCGEN_PATH' at line 1136 of file '/casa/host/build/build_files/aims-free/aimsdata/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
[ 41%] Built target EcatVolMIProj
warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value
Using the default: a4!
Consolidate compiler generated dependencies of target EcatVolReverse
[ 41%] Built target EcatVolReverse
Doxygen version used: 1.9.1
Searching for include files...
Searching for files in directory /casa/host/build/include
Searching for files in directory /casa/host/build/include/aims
Searching for files in directory /casa/host/build/include/aims/algorithm
Searching for files in directory /casa/host/build/include/aims/attributedview
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Parsin/casa/host/build/include/aims/utility/anytype_reader_details.h:36: warning: the name 'Belongs' supplied as the argument in the \file statement is not an input file
/casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag:1: warning: Internal inconsistency: scope for class carto::conversion::Helper::yes not found!
/casa/host/build/include/aims/data/cartodatavolume.h:60: warning: the name 'more' supplied as the argument of the \class, \struct, \union, or \include command is not an input file
/casa/host/build/include/aims/data/cartodatavolume.h:62: warning: the name 'classes' supplied as the argument of the \class, \struct, \union, or \include command is not an input file
[ 41%] Built target morphologist-ui-sphinx
[autosummary] generating autosummary for: index.rst, pyaims_aimsalgo.rst, pyaims_aimsalgo_examples.rst, pyaims_algo.rst, pyaims_api_aims.rst, pyaims_api_aimsalgo.rst, pyaims_examples.rst, pyaims_examples_advanced.rst, pyaims_highlevel.rst, pyaims_lowlevel.rst, pyaims_modules_api.rst, pyaims_tutorial.rst, pyaims_tutorial_nb.ipynb, volume_orientation.ipynb
[ 41%] Create "share/doc/5.2"
[ 45%] Built target aimsdata
This plugin does not support propagateSizeHints()
[ 45%] Built target morphologist-ui-devdoc
Consolidate compiler generated dependencies of target DiscoFFDMetrics
Consolidate compiler generated dependencies of target AimsAverage
[ 45%] Built target DiscoFFDMetrics
[ 45%] Built target AimsAverage
Consolidate compiler generated dependencies of target AimsChannelExtract
Consolidate compiler generated dependencies of target AimsComposeTransformation
[ 45%] Built target AimsComposeTransformation
[ 45%] Built target AimsChannelExtract
Consolidate compiler generated dependencies of target AimsConnectComp
Consolidate compiler generated dependencies of target AimsFiberOversampler
[ 45%] Built target AimsConnectComp
[ 45%] Built target AimsFiberOversampler
Consolidate compiler generated dependencies of target AimsFileInfo
Consolidate compiler generated dependencies of target AimsFileConvert
[ 45%] Built target AimsFileInfo
[ 45%] Built target AimsFileConvert
Consolidate compiler generated dependencies of target AimsFlip
Consolidate compiler generated dependencies of target AimsGraphComplete
[ 45%] Built target AimsGraphComplete
[ 45%] Built target AimsFlip
/casa/host/build/include/aims/border/borderiterator.h:290: warning: no uniquely matching class member found for
template < T >
aims::BorderIterator< T >::const_iterator::const_iterator(const typename aims::BorderIterator< T >::aims::BorderIterator::const_iterator &other)
Possible candidates:
'aims::BorderIterator< T >::const_iterator::const_iterator()' at line 132 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::const_iterator::const_iterator(const const_iterator &other)' at line 134 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::const_iterator::const_iterator(const iterator &other)' at line 136 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::const_iterator::const_iterator(BorderIterator< T > &b, bool end=false)' at line 140 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::const_iterator::const_iterator(BorderIterator< T > &b, const Point4dl ¤t)' at line 142 of file /casa/host/build/include/aims/border/borderiterator.h
/casa/host/build/include/aims/border/borderiterator.h:297: warning: no uniquely matching class member found for
template < T >
aims::BorderIterator< T >::const_iterator::const_iterator(const typename aims::BorderIterator< T >::aims::BorderIterator::iterator &other)
Possible candidates:
'aims::BorderIterator< T >::const_iterator::const_iterator()' at line 132 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::const_iterator::const_iterator(const const_iterator &other)' at line 134 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::const_iterator::const_iterator(const iterator &other)' at line 136 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::const_iterator::const_iterator(BorderIterator< T > &b, bool end=false)' at line 140 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::const_iterator::const_iterator(BorderIterator< T > &b, const Point4dl ¤t)' at line 142 of file /casa/host/build/include/aims/border/borderiterator.h
/casa/host/build/include/aims/border/borderiterator.h:304: warning: no uniquely matching class member found for
template < T >
BorderIterator< T >::const_iterator & aims::BorderIterator< T >::const_iterator::operator=(const typename aims::BorderIterator< T >::aims::BorderIterator::const_iterator &other)
Possible candidates:
'const_iterator & aims::BorderIterator< T >::const_iterator::operator=(const const_iterator &other)' at line 147 of file /casa/host/build/include/aims/border/borderiterator.h
'const_iterator & aims::BorderIterator< T >::const_iterator::operator=(const iterator &other)' at line 149 of file /casa/host/build/include/aims/border/borderiterator.h
/casa/host/build/include/aims/border/borderiterator.h:313: warning: no uniquely matching class member found for
template < T >
BorderIterator< T >::const_iterator & aims::BorderIterator< T >::const_iterator::operator=(const typename aims::BorderIterator< T >::aims::BorderIterator::iterator &other)
Possible candidates:
'const_iterator & aims::BorderIterator< T >::const_iterator::operator=(const const_iterator &other)' at line 147 of file /casa/host/build/include/aims/border/borderiterator.h
'const_iterator & aims::BorderIterator< T >::const_iterator::operator=(const iterator &other)' at line 149 of file /casa/host/build/include/aims/border/borderiterator.h
/casa/host/build/include/aims/border/borderiterator.h:552: warning: no uniquely matching class member found for
template < T >
aims::BorderIterator< T >::iterator::iterator(const typename aims::BorderIterator< T >::aims::BorderIterator::iterator &other)
Possible candidates:
'aims::BorderIterator< T >::iterator::iterator()' at line 213 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::iterator::iterator(const iterator &other)' at line 215 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::iterator::iterator(BorderIterator< T > &b, bool end=false)' at line 219 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::iterator::iterator(BorderIterator< T > &b, const Point4dl ¤t)' at line 221 of file /casa/host/build/include/aims/border/borderiterator.h
/casa/host/build/include/aims/connectivity/structuring_element.h:94: warning: no uniquely matching class member found for
iterator over Point3dl of the aims::StructuringElement::aims::StructuringElement
/casa/host/build/include/aims/connectivity/structuring_element.h:96: warning: documented symbol 'const_iterator over Point3dl of aims::StructuringElement::the' was not declared or defined.
/casa/host/build/include/aims/connectivity/structuring_element.h:381: warning: documented symbol 'bool matrix x3x3 elements that describe a aims::strel::Connectivity::D' was not declared or defined.
Consolidate compiler generated dependencies of target AimsGraphConvert
Consolidate compiler generated dependencies of target AimsGraphExtractTransformation
/casa/host/build/include/aims/data/cartodatavolume.h:761: warning: no uniquely matching class member found for
template < T >
AimsData< T >::reference AimsData< T >::operator[](AimsData< T >::size_t n)
Possible candidates:
'reference AimsData< T >::operator[](size_type n)' at line 145 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator[](size_type n) const' at line 146 of file /casa/host/build/include/aims/data/cartodatavolume.h
/casa/host/build/include/aims/data/cartodatavolume.h:770: warning: no uniquely matching class member found for
template < T >
AimsData< T >::const_reference AimsData< T >::operator[](AimsData< T >::size_t n) const
Possible candidates:
'reference AimsData< T >::operator[](size_type n)' at line 145 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator[](size_type n) const' at line 146 of file /casa/host/build/include/aims/data/cartodatavolume.h
/casa/host/build/include/aims/data/cartodatavolume.h:779: warning: no uniquely matching class member found for
template < T >
AimsData< T >::reference AimsData< T >::operator()(AimsData< T >::size_t x, AimsData< T >::size_type y, AimsData< T >::size_type z, AimsData< T >::size_type t)
Possible candidates:
'reference AimsData< T >::operator()(size_type x=0, size_type y=0, size_type z=0, size_type t=0)' at line 147 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(size_type x=0, size_type y=0, size_type z=0, size_type t=0) const' at line 149 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point4d &pt)' at line 151 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point4d &pt) const' at line 152 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point4dl &pt)' at line 153 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point4dl &pt) const' at line 154 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point3d &pt)' at line 155 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point3d &pt) const' at line 156 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point3dl &pt)' at line 157 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point3dl &pt) const' at line 158 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point2d &pt)' at line 159 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point2d &pt) const' at line 160 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point2dl &pt)' at line 161 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point2dl &pt) const' at line 162 of file /casa/host/build/include/aims/data/cartodatavolume.h
/casa/host/build/include/aims/data/cartodatavolume.h:789: warning: no uniquely matching class member found for
template < T >
AimsData< T >::const_reference AimsData< T >::operator()(AimsData< T >::size_t x, AimsData< T >::size_type y, AimsData< T >::size_type z, AimsData< T >::size_type t) const
Possible candidates:
'reference AimsData< T >::operator()(size_type x=0, size_type y=0, size_type z=0, size_type t=0)' at line 147 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(size_type x=0, size_type y=0, size_type z=0, size_type t=0) const' at line 149 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point4d &pt)' at line 151 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point4d &pt) const' at line 152 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point4dl &pt)' at line 153 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point4dl &pt) const' at line 154 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point3d &pt)' at line 155 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point3d &pt) const' at line 156 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point3dl &pt)' at line 157 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point3dl &pt) const' at line 158 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point2d &pt)' at line 159 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point2d &pt) const' at line 160 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point2dl &pt)' at line 161 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point2dl &pt) const' at line 162 of file /casa/host/build/include/aims/data/cartodatavolume.h
/casa/host/build/include/aims/data/fastAllocationData.h:111: warning: no uniquely matching class member found for
template < T >
const carto::AllocatorContext AimsFastAllocationData< T >::fastAllocatorContext & aims::carto::MemoryAllocator::singleton()
/casa/host/build/include/aims/data/pheader.h:101: warning: no uniquely matching class member found for
template
Object carto::Object::value(const aims::PythonHeader &v)
Possible candidates:
'Object carto::Object::value(const Object &value)' at line 1 of file /casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag
'static Object carto::Object::value()' at line 1 of file /casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag
'static Object carto::Object::value(const T &)' at line 1 of file /casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag
[ 45%] Built target AimsGraphExtractTransformation
[ 45%] Built target AimsGraphConvert
Consolidate compiler generated dependencies of target AimsGraphMerge
Consolidate compiler generated dependencies of target AimsInvertTransformation
/casa/host/build/include/aims/utility/channel.h:122: warning: no uniquely matching class member found for
template < T, U, C >
U ChannelSelector::select(const T &input, const uint8_t)
/casa/host/build/include/aims/utility/channel.h:128: warning: no uniquely matching class member found for
template < T, U, C >
void ChannelSelector::set(T &input, const uint8_t, const U &value)
/casa/host/build/include/aims/utility/channel.h:134: warning: no uniquely matching class member found for
template < U >
U ChannelSelector::select(const AimsRGB &input, const uint8_t channel)
/casa/host/build/include/aims/utility/channel.h:155: warning: no uniquely matching class member found for
template < U >
void ChannelSelector::set(AimsRGB &input, const uint8_t channel, const U &value)
/casa/host/build/include/aims/utility/channel.h:171: warning: no uniquely matching class member found for
template < U >
U ChannelSelector::select(const AimsRGBA &input, const uint8_t channel)
/casa/host/build/include/aims/utility/channel.h:196: warning: no uniquely matching class member found for
template < U >
void ChannelSelector::set(AimsRGBA &input, const uint8_t channel, const U &value)
/casa/host/build/include/aims/utility/channel.h:215: warning: no uniquely matching class member found for
template < U >
U ChannelSelector::select(const AimsHSV &input, const uint8_t channel)
/casa/host/build/include/aims/utility/channel.h:239: warning: no uniquely matching class member found for
template < U >
void ChannelSelector::set(AimsHSV &input, const uint8_t channel, const U &value)
/casa/host/build/include/aims/utility/converter_bucket.h:264: warning: no uniquely matching class member found for
template < INP, OUTP >
void carto::RawConverter< INP, OUTP >::printToVolume(const aims::BucketMap< INP > &in, carto::rc_ptr< Volume< OUTP > > &out, const Point3d &offset) const
/casa/host/build/include/aims/utility/converter_bucket.h:384: warning: no uniquely matching class member found for
template < OUTP >
void carto::RawConverter< OUTP >::printToVolume(const aims::BucketMap< Void > &in, carto::rc_ptr< Volume< OUTP > > &out, const Point3d &offset) const
[ 45%] Built target AimsInvertTransformation
[ 45%] Built target AimsGraphMerge
Consolidate compiler generated dependencies of target aimsalgo
Consolidate compiler generated dependencies of target AimsMerge2Rgb
Consolidate compiler generated dependencies of target AimsMassCenter
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 14 source files that are out of date
updating environment: 0 added, 0 changed, 0 removed
reading sources...
looking for now-outdated files... none found
preparing documents... [ 45%] Built target AimsMassCenter
[ 45%] Built target AimsMerge2Rgb
done
writing output... [ 7%] index
Consolidate compiler generated dependencies of target AimsMeshArea
Consolidate compiler generated dependencies of target AimsMergeLabel
[ 45%] Built target AimsMeshArea
[ 45%] Built target AimsMergeLabel
[ 50%] Built target aimsalgo
Consolidate compiler generated dependencies of target AimsMeshCut
Consolidate compiler generated dependencies of target AimsMeshes2Graph
Consolidate compiler generated dependencies of target AimsMeshGenerate
[ 50%] Built target AimsMeshCut
[ 50%] Built target AimsMeshes2Graph
[ 54%] Built target AimsMeshGenerate
Consolidate compiler generated dependencies of target AimsMeshTransform
Consolidate compiler generated dependencies of target AimsOverVolume
Consolidate compiler generated dependencies of target AimsRemoveNaN
[ 54%] Built target AimsMeshTransform
[ 54%] Built target AimsOverVolume
[ 54%] Built target AimsRemoveNaN
Consolidate compiler generated dependencies of target AimsRoiFeatures
Consolidate compiler generated dependencies of target AimsSelectLabel
[ 54%] Built target AimsRoiFeatures
Consolidate compiler generated dependencies of target AimsSetMinf
[ 54%] Built target AimsSelectLabel
Consolidate compiler generated dependencies of target AimsSplitRgb
[ 54%] Built target AimsSetMinf
Consolidate compiler generated dependencies of target AimsSubVolume
[ 54%] Built target AimsSplitRgb
Consolidate compiler generated dependencies of target AimsSumSparseMatrix
[ 54%] Built target AimsSubVolume
Consolidate compiler generated dependencies of target AimsTCat
[ 54%] Built target AimsSumSparseMatrix
Consolidate compiler generated dependencies of target AimsTex2Graph
[ 54%] Built target AimsTCat
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
Consolidate compiler generated dependencies of target AimsTex2Vol
[ 54%] Built target AimsTex2Graph
/casa/host/build/include/aims/mesh/surfacemanip.h:167: warning: Unsupported xml/html tag <region> found
/casa/host/build/include/aims/mesh/surfacemanip.h:175: warning: Unsupported xml/html tag <region> found
Consolidate compiler generated dependencies of target AimsThreshold
[ 54%] Built target AimsTex2Vol
Consolidate compiler generated dependencies of target AimsVectorFieldToMesh
[ 54%] Built target AimsThreshold
[ 54%] Built target AimsVectorFieldToMesh
/casa/host/build/include/aims/io/process.h:256: warning: included file AimsFileInfo/fileInfo.cc is not found. Check your EXAMPLE_PATH
Consolidate compiler generated dependencies of target AimsVolumeExtract
Consolidate compiler generated dependencies of target aimstiff
Consolidate compiler generated dependencies of target AimsBundle2Vol
[ 54%] Built target AimsVolumeExtract
[ 54%] Built target aimstiff
[ 54%] Built target AimsBundle2Vol
Consolidate compiler generated dependencies of target AimsBundleAnalysis
Consolidate compiler generated dependencies of target Aims3DPointCloud
Consolidate compiler generated dependencies of target AimsActivPixel2Volume
[ 54%] Built target AimsBundleAnalysis
g file /casa/host/build/include/aims/plugin/tiffplugin.h...
Preprocessing /casa/host/build/include/aims/io/gifti.h...
Parsing file /casa/host/build/include/aims/io/gifti.h...
Preprocessing /casa/host/build/include/aims/io/giftiformat.h...
Parsing file /casa/host/build/include/aims/io/giftiformat.h...
Preprocessing /casa/host/build/include/aims/io/giftimeshformat_d.h...
Parsing file /casa/host/build/include/aims/io/giftimeshformat_d.h...
Preprocessing /casa/host/build/include/aims/io/giftitextureformat_d.h...
Parsing file /casa/host/build/include/aims/io/giftitextureformat_d.h...
Preprocessing /casa/host/build/include/aims/io/giftiheader.h...
Parsing file /casa/host/build/include/aims/io/giftiheader.h...
Preprocessing /casa/host/build/include/aims/io/giftifinderformat.h...
Parsing file /casa/host/build/include/aims/io/giftifinderformat.h...
Preprocessing /casa/host/build/include/aims/io/giftiutil.h...
Parsing file /casa/host/build/include/aims/io/giftiutil.h...
Preprocessing /casa/host/build/include/aims/plugin/giftiplugin.h...
Parsing file /casa/host/build/include/aims/plugin/giftiplugin.h...
Preprocessing /casa/host/build/include/aims/config/config.h...
Parsing file /casa/host/build/include/aims/config/config.h...
Building macro definition list...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Computing nesting relations for classes...
Associating documentation with classes...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
Generating style sheet...
Generating search indices...
Generating example documentation...
Generating docs for example AimsFileInfo/fileInfo.cc...
Generating file sources...
Generating code for file aims/border/borderfiller.h...
Generating code for file aims/border/borderiterator.h...
Generating code for file aims/bucket/bucket.h...
Generating code for file aims/bucket/bucket_g.h...
Generating code for file aims/bucket/bucketgen.h...
Generating code for file aims/bucket/bucketMap.h...
Generating code for file aims/bucket/bucketutil.h...
Generating code for file aims/bucket/bucketutil_d.h...
Generating code for file aims/bucket/item.h...
Generating code for file aims/bucket/sparsevolume.h...
Generating code for file aims/color/colormap.h...
Generating code for file aims/config/aimsdata_config.h...
Generating code for file aims/config/config.h...
Generating code for file aims/connectivity/component.h...
Generating code for file aims/connectivity/component_d.h...
Generating code for file aims/connectivity/connectivity.h...
Generating code for file aims/connectivity/connectivity_g.h...
Generating code for file aims/connectivity/structuring_eleme[ 54%] Built target Aims3DPointCloud
Consolidate compiler generated dependencies of target AimsAddNoise2Data
[ 54%] Built target AimsActivPixel2Volume
[ 54%] Built target AimsAddNoise2Data
Consolidate compiler generated dependencies of target AimsApplyVectorField
Consolidate compiler generated dependencies of target AimsApplyTransform
Consolidate compiler generated dependencies of target AimsBuildDti
[ 54%] Built target AimsApplyTransform
[ 54%] Built target AimsApplyVectorField
[ 54%] Built target AimsBuildDti
Consolidate compiler generated dependencies of target AimsBuildIndex
Consolidate compiler generated dependencies of target AimsBvalue
Consolidate compiler generated dependencies of target AimsChamferDistanceMap
[ 54%] Built target AimsBuildIndex
[ 54%] Built target AimsBvalue
[ 54%] Built target AimsChamferDistanceMap
Consolidate compiler generated dependencies of target AimsClusterArg
Consolidate compiler generated dependencies of target AimsConvexHull
[ 54%] Built target AimsClusterArg
Consolidate compiler generated dependencies of target AimsCorrectionEpi
[ 54%] Built target AimsConvexHull
[ 54%] Built target AimsCorrectionEpi
Consolidate compiler generated dependencies of target AimsCreateTexture
Consolidate compiler generated dependencies of target AimsT2BasedCorrectionEpi
nt.h...
Generating code for file aims/curve/curve.h...
Generating code for file aims/data/cartodatavolume.h...
Generating code for file aims/data/data.h...
Generating code for file aims/data/data_g.h...
Generating code for file aims/data/fastAllocationData.h...
Generating code for file aims/data/header.h...
Generating code for file aims/data/headerutil.h...
Generating code for file aims/data/pheader.h...
Generating code for file aims/data/pheader_doc.h...
Generating code for file aims/data/sliceformatheader.h...
Generating code for file aims/data/volumemanip.h...
Generating code for file aims/data/volumeoperators_aims.h...
Generating code for file aims/def/assert.h...
Generating code for file aims/def/def_g.h...
Generating code for file aims/def/general.h...
Generating code for file aims/def/info.h...
Generating code for file aims/def/path.h...
Generating code for file aims/def/settings.h...
Generating code for file aims/doc/aimsdata_doc.h...
Generating code for file aims/features/features.h...
Generating code for file aims/features/point_set_features.h...
Generating code for file aims/features/roi_features.h...
Generating code for file aims/features/scalar_set_features.h...
Generating code for file aims/fibers/bundleRegroup.h...
Generating code for file aims/fibers/bundles.h...
Generating code for file aims/fibers/bundles_features.h...
Generating code for file aims/fibers/bundleSampler.h...
Generating code for file aims/fibers/bundlesFusion.h...
Generating code for file aims/fibers/bundlesSlicer.h...
Generating code for file aims/fibers/fiberOversampler.h...
Generating code for file aims/fibers/mrtrixbundlereader.h...
Generating code for file aims/fibers/trackvisbundlereader.h...
Generating code for file aims/getopt/getopt2.h...
Generating code for file aims/getopt/getoptProcess.h...
Generating code for file aims/graph/graphmanip.h...
Generating code for file aims/graph/graphmanip_d.h...
Generating code for file aims/hsv/hsv.h...
Generating code for file aims/io/aimsGraphR.h...
Generating code for file aims/io/aimsGraphR_d.h...
Generating code for file aims/io/aimsGraphW.h...
Generating code for file aims/io/aimsGraphW_d.h...
Generating code for file aims/io/apcreader.h...
Generating code for file aims/io/argheader.h...
Generating code for file aims/io/argR.h...
Generating code for file aims/io/argW.h...
Generating code for file aims/io/baseFormats_bucket.h...
Generating code for file aims/io/baseFormats_bucket_d.h...
Generating code for file aims/io/baseFormats_cartovolume.h...
Generating code for file aims/io/baseFormats_genericobject.h...
Generating code for file aims/io/baseFormats_graph.h...
Generating code for file aims/io/baseFormats_hierarchy.h...
Generating code for file aims/io/baseFormats_mesh.h...
Generating code for file aims/io/baseFormats_mesh_d.h...
Generating code for file aims/io/baseFormats_sparsematrix.h...
Generating code for file aims/io/baseFormats_syntax.h...
Generating code for file aims/io/baseFormats_texture.h...
Generating code for file aims/io/baseFormats_texture_d.h...
Generating code for file aims/io/baseFormats_volume.h...
Generating code for file aims/io/baseFormats_volume_d.h...
Generating code for file aims/io/bckheader.h...
Generating code for file aims/io/bckItemR.h...
Generating code for file aims/io/bckItemW.h...
Generating code for file aims/io/bckMapR.h...
Generating code for file aims/io/bckMapW.h...
Generating code for file aims/io/bckR.h...
Generating code for file aims/io/bckW.h...
Generating code for file aims/io/byteswap.h...
Generating code for file aims/io/channelR.h...
Generating code for file aims/io/cmapR.h...
Generating code for file aims/io/cmapW.h...
Generating code for file aims/io/coarseR.h...
Generating code for file aims/io/datatypecode.h...
Generating code for file aims/io/dbh.h...
Generating code for file aims/io/defaultItemR.h...
Generating code for file aims/io/defaultItemW.h...
Generating code for file aims/io/directory.h...
Generating code for file aims/io/dtitensorItemR.h...
Generating code for file aims/io/dtitensorItemW.h...
Generating code for file aimConsolidate compiler generated dependencies of target AimsCurvature2d
[ 54%] Built target AimsCreateTexture
[ 54%] Built target AimsT2BasedCorrectionEpi
[ 54%] Built target AimsCurvature2d
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[ 54%] Built target AimsCurvature3d
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Consolidate compiler generated dependencies of target AimsCompareSPMtToPrimalSketch
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Consolidate compiler generated dependencies of target AimsGaussianSmoothing1d
s/io/ecatfinderformat.h...
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Generating code for file aims/io/fileFormat.h...
Generating code for file aims/io/fileFormat_cartovolume_d.h...
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Generating code for file aims/io/finder.h...
Generating code for file aims/io/finderFormats.h...
Generating code for file aims/io/ge_imageFileOffsets.h...
Generating code for file aims/io/ge_imghdr.h...
Generating code for file aims/io/genesisheader.h...
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Generating code for file aims/io/gifti.h...
Generating code for file aims/io/giftifinderformat.h...
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Generating code for file aims/io/giftiutil.h...
Generating code for file aims/io/graphBundlesFormat.h...
Generating code for file aims/io/hieR.h...
Generating code for file aims/io/imasparseheader.h...
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Generating code for file aims/io/iooptions.h...
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Generating code for file aims/io/jpegformat_d.h...
Generating code for file aims/io/jpegheader.h...
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Generating code for file aims/io/labelImage.h...
Generating code for file aims/io/listItemR.h...
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Generating code for file aims/io/macosxbugs.h...
Generating code for file aims/io/meshheader.h...
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Generating code for file aims/io/tifffinderformat.h...
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Generating code for file aims/io[ 54%] Built target AimsGaussianSmoothing1d
Consolidate compiler generated dependencies of target AimsGraphTransferLabels
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[ 54%] Built target AimsGraphMesh
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Consolidate compiler generated dependencies of target AimsHippocampicReferential
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Consolidate compiler generated dependencies of target AimsImageGLBlobStats
Consolidate compiler generated dependencies of target AimsImagePrimalSketch
[ 54%] Built target AimsIcosaList
[ 54%] Built target AimsImageGLBlobStats
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Consolidate compiler generated dependencies of target AimsImageSmoothing
Consolidate compiler generated dependencies of target AimsImageScaleSpace
Consolidate compiler generated dependencies of target AimsParameterize2DImageDomain
[ 54%] Built target AimsImageSmoothing
[ 54%] Built target AimsImageScaleSpace
/tiffformat_d.h...
Generating code for file aims/io/tiffheader.h...
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Generating code for file aims/io/vidafinderformat.h...
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Generating code for file aims/io/wavefrontheader.h...
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Generating code for file aims/io/writer.h...
Generating code for file aims/io/writer_d.h...
Generating code for file aims/io_soma/fsannotformatchecker.h...
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Generating code for file aims/io_soma/fscurvformatchecker.h...
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Generating code for file aims/io_soma/ltaformatchecker.h...
Generating code for file aims/io_soma/ltaformatreader.h...
Generating code for file aims/io_soma/trm_compose_formatchecker.h...
Generating code for file aims/io_soma/trm_compose_formatreader.h...
Generating code for file aims/io_soma/trm_header_formatchecker.h...
Generating code for file aims/io_soma/trm_header_formatreader.h...
Generating code for file aims/io_soma/trmformatchecker.h...
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Generating code for file aims/io_soma/trmgraphformatchecker.h...
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Generati[ 54%] Built target AimsParameterize2DImageDomain
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Consolidate compiler generated dependencies of target AimsInflate
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[ 54%] Built target AimsMask
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[ 54%] Built target AimsMeanCurvFlow
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Consolidate compiler generated dependencies of target AimsMerge
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Consolidate compiler generated dependencies of target AimsMesh2Ascii
[ 54%] Built target AimsMesh
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Consolidate compiler generated dependencies of target AimsMesh2SSGraph
Consolidate compiler generated dependencies of target AimsMesh2Sphere
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[ 54%] Built target AimsMesh2Sphere
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Consolidate compiler generated dependencies of target AimsMeshBlobExtract
Consolidate compiler generated dependencies of target AimsMeshBrain
warning: Included by graph for 'aimsdata_config.h' not generated, too many nodes (88), threshold is 50. Consider increasing DOT_GRAPH_MAX_NODES.
ng code for file aims/plugin/giftiplugin.h...
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Generating code for file aims/roi/voxelSampling.h...
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Generating code for file aims/sino/sino.h...
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Generating file documentation...
Generating docs for file aims/border/borderfiller.h...
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Generating docs for file aims/connectConsolidate compiler generated dependencies of target AimsMeshCC2Arg
[ 54%] Built target AimsMeshBlobExtract
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[ 54%] Built target AimsMeshCleaner
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[ 54%] Built target AimsMeshConnectedComponent
Consolidate compiler generated dependencies of target AimsMeshDecimation
ivity/component.h...
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Generating docs for file aims/features/features.h...
Generating docs for file aims/features/point_set_features.h...
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Generating docs for file aims/fibers/bundleRegroup.h...
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Generating docs for file aims/fibers/bundleSampler.h...
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Generating docs for file aims/fibers/fiberOversampler.h...
Generating docs for file aims/fibers/mrtrixbundlereader.h...
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Generating docs for file aims/getopt/getopt2.h...
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Generating docs for file aims/graph/graphmanip.h...
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Generating docs for file aims/hsv/hsv.h...
Generating docs for file aims/io/aimsGraphR.h...
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Generating docs for file aims/io/apcreader.h...
Generating docs for file aims/io/argheader.h...
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Generating docs for file aims/io/bckheader.h...
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Generating docs for file aims/io/byteswap.h...
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Generating docs for file aims/io/coarseR.h...
Generating docs for file aims/io/datatypecode.h...
Generating docs for file aims/io/dbh.h...
Generating docs for[ 54%] Built target AimsMeshCurvature
Consolidate compiler generated dependencies of target AimsMeshDistance
[ 54%] Built target AimsMeshDecimation
[ 54%] Built target AimsMeshDistance
Consolidate compiler generated dependencies of target AimsMeshGeodesicDepth
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[ 54%] Built target AimsMeshGeodesicDepth
[ 54%] Built target AimsMeshLineMeasurement
Consolidate compiler generated dependencies of target AimsMeshParcellation2VolumeParcellation
Consolidate compiler generated dependencies of target AimsMeshWhite
Consolidate compiler generated dependencies of target AimsMeshSmoothing
[ 54%] Built target AimsMeshParcellation2VolumeParcellation
[ 54%] Built target AimsMeshWhite
[ 54%] Built target AimsMeshSmoothing
Consolidate compiler generated dependencies of target AimsMIRegister
file aims/io/defaultItemR.h...
Generating docs for file aims/io/defaultItemW.h...
Generating docs for file aims/io/directory.h...
Generating docs for file aims/io/dtitensorItemR.h...
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Generating docs for file aims/io/ecatfinderformat.h...
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Generating docs for file aims/io/ecatheader.h...
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Generating docs for file aims/io/fdffinderformat.h...
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Generating docs for file aims/io/fileFormat.h...
Generating docs for file aims/io/fileFormat_cartovolume_d.h...
Generating docs for file aims/io/fileFormat_d.h...
Generating docs for file aims/io/finder.h...
Generating docs for file aims/io/finderFormats.h...
Generating docs for file aims/io/ge_imageFileOffsets.h...
Generating docs for file aims/io/ge_imghdr.h...
Generating docs for file aims/io/genesisheader.h...
Generating docs for file aims/io/genesisR.h...
Generating docs for file aims/io/gifti.h...
Generating docs for file aims/io/giftifinderformat.h...
Generating docs for file aims/io/giftiformat.h...
Generating docs for file aims/io/giftiheader.h...
Generating docs for file aims/io/giftimeshformat_d.h...
Generating docs for file aims/io/giftitextureformat_d.h...
Generating docs for file aims/io/giftiutil.h...
Generating docs for file aims/io/graphBundlesFormat.h...
Generating docs for file aims/io/hieR.h...
Generating docs for file aims/io/imasparseheader.h...
Generating docs for file aims/io/io_g.h...
Generating docs for file aims/io/iooptions.h...
Generating docs for file aims/io/itemR.h...
Generating docs for file aims/io/itemR_stl.h...
Generating docs for file aims/io/itemW.h...
Generating docs for file aims/io/itemW_stl.h...
Generating docs for file aims/io/jpegfinderformat.h...
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Generating docs for file aims/io/jpegformat_d.h...
Generating docs for file aims/io/jpegheader.h...
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Generating docs for file aims/io/labelImage.h...
Generating docs for file aims/io/listItemR.h...
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Generating docs for file aims/io/macosxbugs.h...
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GenerConsolidate compiler generated dependencies of target AimsMorphoMath
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[ 54%] Built target AimsMIRegister
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ating docs for file aims/io/texheader.h...
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Generating docs for file aims/io_soma/trm_compose_formatchecker.h...
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Generating docs for file aims/io_soma/trm_header_formatchecker.h...
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Generating docs for file aims/mes[ 54%] Built target AimsNormWithRegion
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QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/tmp/runtime-a-sac-ns-brainvisa'
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[ 54%] Built target AimsPCAloc
/casa/host/build/include/aims/doc/aimsdata_doc.h:381: warning: explicit link request to 'include' could not be resolved
/casa/host/build/include/aims/doc/aimsdata_doc.h:383: warning: explicit link request to 'include' could not be resolved
/casa/host/build/include/aims/doc/aimsdata_doc.h:384: warning: explicit link request to 'include' could not be resolved
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Consolidate compiler generated dependencies of target AimsRegisterBMEstimate
h/texturetools.h...
Generating docs for file aims/meshprojection/meshprojection.h...
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Generating docConsolidate compiler generated dependencies of target AimsRegisterFFDFromCoordImages
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/casa/host/build/include/aims/resampling/mask.h:46: warning: The following parameters of aims::mask(const BucketMap< Void > &src, const BucketMap< Void > &m, bool intersect=true) are not documented:
parameter 'src'
parameter 'm'
[ 54%] Built target AimsSplitArray
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/casa/host/build/include/aims/border/borderiterator.h:187: warning: argument 'move' of command @param is not found in the argument list of aims::BorderIterator< T >::const_iterator::computeNext(const Point4dl &p) const
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s for compound AimsColorMapReader...
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QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/tmp/runtime-a-sac-ns-brainvisa'
/casa/host/build/include/aims/fibers/bundleSampler.h:65: warning: The following parameter of aims::BundleSampler::BundleSampler(float percent, const std::string &bundle_name, const std::string &sampled_bundle_name, int mode) is not documented:
parameter 'sampled_bundle_name'
/casa/host/build/include/aims/fibers/bundleSampler.h:76: warning: The following parameter of aims::BundleSampler::BundleSampler(float percent, const std::string &bundle_name, const std::string &sampled_bundle_name, int mode, bool discarded) is not documented:
parameter 'sampled_bundle_name'
[ 58%] Built target AimsTextureDerivative
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/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
[ 58%] Built target AimsTextureErosion
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Consolidate compiler generated dependencies of target AimsTexturePrimalSketch
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
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.
Generating docs for compound aims::Path...
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Generating docs for compoConsolidate compiler generated dependencies of target AimsTextureVoronoi
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Consolidate compiler generated dependencies of target AimsVeinExtraction
Could not use Matplotlib: <class 'ImportError'> Cannot load backend 'Qt5Agg' which requires the 'qt' interactive framework, as 'headless' is currently running
Qt offscreen does not work.
Cannot allocate an OpenGL context. Using Xvfb if possible.
using DISPLAY=:3
VirtualGL found.
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 12 source files that are out of date
updating environment: 0 added, 4 changed, 0 removed
reading sources... [ 25%] python_bv_data
[ 58%] Built target AimsVFilter
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und aims::StxFormat...
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Generating docs for compound aims::HierarchyReader...
Generating docs for compound aims::ImasHeader...
Generating docs for compound aims::IOOptions...
Generating docs for compound aims::ItemReader...
Generating docs for compound aims::DefaultItemReader< std::vector< T > >...
Generating docs for compound aims::DefaultBSwapItemReader< std::vector< T > >...
Generating docs for compound aims::DefaultAsciiItemReader< std::vector< T > >...
Generating docs for compound aims::ItemWriter...
Generating docs for compound aims::DefaultItemWriter< std::vector< T > >...
Generating docs for compound aims::DefaultBSwapItemWriter< std::vector< T > >...
Generating docs for compound aims::DefaultAsciiItemWriter< std::vector< T > >...
Generating docs for compound aims::LabelReader...
Generating docs for compound aims::DefaultItem[ 58%] Built target AimsZCat
Consolidate compiler generated dependencies of target AimsSiemensEPI2Volume
Consolidate compiler generated dependencies of target aimsecat
/casa/host/build/include/aims/io/spmR.h:79: warning: argument 'border' of command @param is not found in the argument list of aims::SpmReader< T >::read(AimsData< T > &thing, const carto::AllocatorContext &context, carto::Object options)
/casa/host/build/include/aims/io/spmR.h:83: warning: The following parameters of aims::SpmReader::read(AimsData< T > &thing, const carto::AllocatorContext &context, carto::Object options) are not documented:
parameter 'context'
parameter 'options'
[ 58%] Built target AimsSiemensEPI2Volume
Consolidate compiler generated dependencies of target AimsRegisterFFDEstimate
[ 58%] Built target aimsecat
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
Consolidate compiler generated dependencies of target AimsBundleSelectCenter
[ 58%] Built target AimsRegisterFFDEstimate
[ 58%] Built target AimsBundleSelectCenter
Consolidate compiler generated dependencies of target mkhierarchy-anatomist
writing output... [ 14%] pyaims_aimsalgo
[ 58%] Built target mkhierarchy-anatomist
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
Consolidate compiler generated dependencies of target aimsgui
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
reading sources... [ 45%] api/process
Consolidate compiler generated dependencies of target highres-cortex
/casa/host/build/include/aims/mesh/surfacemanip.h:167: warning: Unsupported xml/html tag <region> found
/casa/host/build/include/aims/mesh/surfacemanip.h:175: warning: Unsupported xml/html tag <region> found
/casa/host/build/include/aims/mesh/surfacemanip.h:167: warning: Unsupported xml/html tag <region> found
/casa/host/build/include/aims/mesh/surfacemanip.h:175: warning: Unsupported xml/html tag <region> found
[ 58%] Built target aimsgui
Qt offscreen does not work.
Cannot allocate an OpenGL context. Using Xvfb if possible.
using DISPLAY=:1
VirtualGL found.
global modules: /casa/host/build/share/anatomist-5.2/python_plugins
home modules: /casa/home/.anatomist/python_plugins
loading module ana_image_math
loading module gradientpalette
loading module statsplotwindow
loading module foldsplit
loading module meshsplit
loading module measure
loading module save_resampled
loading module bsa_proba
loading module paletteViewer
loading module infowindow
loading module palettecontrols
loading module anacontrolmenu
loading module bundles_split_by_cortical_regions
loading module modelGraphs
loading module gltf_io
loading module simple_controls
loading module profilewindow
loading module volumepalettes
loading module valuesplotwindow
loading module selection
loading module histogram
loading module bundles_small_brains
all python modules loaded
Anatomist started.
Using Sphinx-Gallery to convert rst text blocks to markdown for .ipynb files.
loading pickled environment... Reader< std::list< T > >...
Generating docs for compound aims::DefaultAsciiItemReader< std::list< T > >...
Generating docs for compound aims::DefaultBSwapItemReader< std::list< T > >...
Generating docs for compound aims::DefaultItemWriter< std::list< T > >...
Generating docs for compound aims::DefaultAsciiItemWriter< std::list< T > >...
Generating docs for compound aims::DefaultBSwapItemWriter< std::list< T > >...
Generating docs for compound aims::MniObjHeader...
Generating docs for compound aims::PovWriter...
Generating docs for compound aims::ScaledEncoding...
Generating docs for compound aims::SelectionReader...
Generating docs for compound aims::SelectionWriter...
Generating docs for compound aims::SpmReader...
Generating docs for compound aims::SpmHeader...
Generating docs for compound aims::SpmWriter...
Generating docs for compound aims::DefaultItemReader< Trieder >...
Generating docs for compound aims::DefaultAsciiItemReader< Trieder >...
Generating docs for compound aims::DefaultBSwapItemReader< Trieder >...
Generating docs for compound aims::DefaultItemWriter< Trieder >...
Generating docs for compound aims::DefaultAsciiItemWriter< Trieder >...
Generating docs for compound aims::DefaultBSwapItemWriter< Trieder >...
Generating docs for compound aims::Reader...
Generating docs for compound aims::ReaderAsObject...
Generating docs for compound aims::GenericWriter...
Generating docs for compound aims::Writer...
Generating docs for compound aims::MeshHeader...
Generating docs for compound aims::MeshReader...
Generating docs for compound aims::MeshWriter...
Generating docs for compound aims::LowLevelRoiReader...
Generating docs for compound aims::DefaultItemReader< Tensor >...
Generating docs for compound aims::DefaultAsciiItemReader< Tensor >...
Generating docs for compound aims::DefaultBSwapItemReader< Tensor >...
Generating docs for compound aims::DefaultItemWriter< Tensor >...
Generating docs for compound aims::DefaultAsciiItemWriter< Tensor >...
Generating docs for compound aims::DefaultBSwapItemWriter< Tensor >...
Generating docs for compound aims::TexHeader...
Generating docs for compound aims::TexReader...
Generating docs for compound aims::TexWriter...
Generating docs for compound aims::TriHeader...
Generating docs for compound aims::TriReader...
Generating docs for compound aims::TriWriter...
Generating docs for compound aims::Process...
Generating docs for compound aims::WavefrontHeader...
Generating docs for compound aims::WavefrontMeshWriter...
Generating docs for compound aims::WavefrontMeshWriter< D, Void >...
Generating docs for compound aims::WavefrontMeshReader...
Generating docs for compound aims::IntegrableOf...
Generating docs for compound aims::IntegratorOf...
Generating docs for compound aims::MathUtil...
Generating docs for compound aims::RombergIntegratorOf...
Generating docs for compound aims::TrapezeIntegratorOf...
Generating docs for compound aims::CutMesh...
Generating docs for compound aims::CutTexturedMesh...
Generating docs for compound aims::SurfaceGenerator...
Generating docs for nested compound aims::SurfaceGenerator::Generator...
Generating docs for nested compound aims::SurfaceGenerator::Generator_wireframe...
Generating docs for compound aims::SurfaceManip...
Generating docs for compound aims::Tex2Graph...
Generating docs for compound aims::MeshProjection...
Generating docs for compound aims::MeshProjectionFactory...
Generating docs for compound aims::DecomposedAffineTransformation3d...
Generating docs for compound aims::Interpolator...
Generating docs for compound aims::LinearInterpolator...
Generating docs for compound aims::Quaternion...
Generating docs for compound aims::StandardReferentials...
Generating docs for compound aims::Hierarchy...
Generating docs for compound aims::specifiedLabels...
Generating docs for compound aims::MaskIterator...
Generating docs for compound aims::MotionedMaskIterator...
Generating docs for compound aims::MaskIteratorOf...
Generating docs for compound aims::NodeFilter...
Generating docs for compound aims::LabelNodeFilter...
Generating docs for coConsolidate compiler generated dependencies of target vip
[ 58%] Built target highres-cortex
[ 62%] Built target vip
Consolidate compiler generated dependencies of target brainrat
Consolidate compiler generated dependencies of target primatologist
[ 62%] Built target brainrat
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
/casa/host/build/include/aims/utility/progress.h:77: warning: The following parameter of aims::ProgressInfo::ProgressInfo(const T1 min, const T1 max, const T2 progressmin=(T2) 0, const T2 progressmax=(T2) 100, const std::string unit="%%", const int width=3, std::ostream &stream=std::cout) is not documented:
parameter 'stream'
/casa/host/build/include/aims/utility/progress.h:87: warning: The following parameter of aims::ProgressInfo::ProgressInfo(const T1 max, std::ostream &stream=std::cout) is not documented:
parameter 'stream'
[ 66%] Built target primatologist
/casa/host/build/include/aims/io/vidaR.h:67: warning: The following parameters of aims::VidaReader::read(AimsData< T > &thing, const carto::AllocatorContext &context, carto::Object options) are not documented:
parameter 'context'
parameter 'options'
Consolidate compiler generated dependencies of target constellation
Consolidate compiler generated dependencies of target sigraph
Consolidate compiler generated dependencies of target cortical_surface
mpound aims::NameNodeFilter...
Generating docs for compound aims::MaskIteratorOf< Graph >...
Generating docs for compound aims::MaskIteratorOf< carto::VolumeRef< T > >...
Generating docs for compound aims::ROILabelMap...
Generating docs for compound aims::VolumeROILabelMap...
Generating docs for compound aims::MotionedVolumeROILabelMap...
Generating docs for compound aims::RoiIterator...
Generating docs for compound aims::MotionedRoiIterator...
Generating docs for compound aims::RoiIteratorOf...
Generating docs for compound aims::RoiIteratorOf< Graph >...
Generating docs for compound aims::RoiIteratorOf< carto::VolumeRef< T > >...
Generating docs for compound aims::AimsRoi...
Generating docs for compound aims::RoiDiff...
Generating docs for nested compound aims::RoiDiff::DiffStat...
Generating docs for compound aims::VoxelSampler...
Generating docs for compound aims::SimpleVoxelSampler...
Generating docs for compound aims::Selection...
Generating docs for compound aims::SelectionSet...
Generating docs for compound aims::Selector...
Generating docs for compound aims::SelectionExpander...
Generating docs for compound aims::CiftiTools...
Generating docs for compound aims::SparseMatrix...
Generating docs for compound aims::DefaultItemReader< SparseMatrix >...
Generating docs for compound aims::DefaultAsciiItemReader< SparseMatrix >...
Generating docs for compound aims::DefaultBSwapItemReader< SparseMatrix >...
Generating docs for compound aims::DefaultItemWriter< SparseMatrix >...
Generating docs for compound aims::DefaultAsciiItemWriter< SparseMatrix >...
Generating docs for compound aims::DefaultBSwapItemWriter< SparseMatrix >...
Generating docs for compound aims::SparseMatrixUtil...
Generating docs for compound aims::SparseOrDenseMatrix...
Generating docs for nested compound aims::SparseOrDenseMatrix::MatrixLazyReader...
Generating docs for compound aims::AffineTransformation3d...
Generating docs for compound aims::TransformationChain3d...
Generating docs for compound aims::TransformationGraph3d...
Generating docs for compound aims::AnyTypeReaderProcess...
Generating docs for compound aims::AnyTypeReader...
Generating docs for compound aims::BoundingBox...
Generating docs for compound aims::Clock...
Generating docs for compound aims::const_cyclic_iterator...
Generating docs for compound aims::cyclic_iterator...
Generating docs for compound aims::AimsLinearCombination...
Generating docs for compound aims::Replacer...
Generating docs for compound aims::ProgressInfo...
Generating docs for compound aims::EcatFormat...
Generating docs for compound aims::EcatHeader...
Generating docs for compound aims::EcatReader...
Generating docs for compound aims::EcatSinoHeader...
Generating docs for compound aims::EcatSinoReader...
Generating docs for compound aims::EcatSinoWriter...
Generating docs for compound aims::EcatWriter...
Generating docs for compound aims::FinderEcatFormat...
Generating docs for compound aims::EcatPlugin...
Generating docs for compound aims::ScannerConf...
Generating docs for compound aims::Sinogram...
Generating docs for compound aims::FinderVidaFormat...
Generating docs for compound aims::VidaFormat...
Generating docs for compound aims::VidaHeader...
Generating docs for compound aims::VidaReader...
Generating docs for compound aims::VidaWriter...
Generating docs for compound aims::VidaPlugin...
Generating docs for compound aims::PlyFormat...
Generating docs for compound aims::PlyHeader...
Generating docs for compound aims::PlyReader...
Generating docs for compound aims::PlyWriter...
Generating docs for compound aims::FinderPlyFormat...
Generating docs for compound aims::PlyPlugin...
Generating docs for compound aims::FdfFormat...
Generating docs for compound aims::FdfHeader...
Generating docs for compound aims::FdfReader...
Generating docs for compound aims::FinderFdfFormat...
Generating docs for compound aims::FdfParType...
Generating docs for compound aims::FdfProcPar...
Generating docs for compound aims::FdfPlugin...
Generating docs for compound aims::JpegFormat...
Generating docs for compound aims::JpegHead[ 66%] Built target constellation
[ 70%] Built target cortical_surface
[ 70%] Built target morphologist-ui-doc
[ 75%] Built target sigraph
Consolidate compiler generated dependencies of target AimsReplaceLevel
Consolidate compiler generated dependencies of target AimsRTiff
/casa/host/build/include/aims/data/cartodatavolume.h:63: warning: End of list marker found without any preceding list items
Consolidate compiler generated dependencies of target AimsFovSplit
[ 75%] Built target AimsReplaceLevel
[ 75%] Built target AimsRTiff
[ 75%] Built target AimsFovSplit
Consolidate compiler generated dependencies of target AimsSumPETFrame
Consolidate compiler generated dependencies of target AimsAttributedViewer
Consolidate compiler generated dependencies of target AimsLabelSelector
er...
Generating docs for compound aims::JpegReader...
Generating docs for compound aims::JpegWriter...
Generating docs for compound aims::FinderJpegFormat...
Generating docs for compound aims::JpegPlugin...
Generating docs for compound aims::TiffFormat...
Generating docs for compound aims::TiffHeader...
Generating docs for compound aims::TiffReader...
Generating docs for compound aims::TiffWriter...
Generating docs for compound aims::FinderTiffFormat...
Generating docs for compound aims::TiffPlugin...
Generating docs for compound aims::GiftiMeshFormat...
Generating docs for compound aims::GiftiTextureFormat...
Generating docs for compound aims::GiftiHeader...
Generating docs for compound aims::FinderGiftiFormat...
Generating docs for compound aims::_convertedNiftiValue...
Generating docs for compound aims::_convertedNiftiValue< AimsVector< U, D > >...
Generating docs for compound aims::_convertedNiftiArrayValue...
Generating docs for compound aims::_convertedNiftiArrayValue< AimsVector< U, D > >...
Generating docs for compound aims::GiftiPlugin...
Generating docs for namespace aims::DataManip
Generating docs for namespace aims::detail
Generating docs for compound aims::detail::cyclic_iterator_base...
Generating docs for namespace aims::internal
Generating docs for compound aims::internal::AimsGraphReader_Private...
Generating docs for namespace aims::strel
Generating docs for compound aims::strel::Shape...
Generating docs for compound aims::strel::ShapeFactory...
Generating docs for compound aims::strel::Connectivity...
Generating docs for compound aims::strel::ConnectivityFactory...
Generating docs for compound aims::strel::ClockWiseCircleXY...
Generating docs for namespace carto
Generating docs for compound carto::DataTypeCode< AimsBucket< T > >...
Generating docs for compound carto::DataTypeCode< aims::BucketMap< T > >...
Generating docs for compound carto::DataTypeCode< AimsData< T > >...
Generating docs for compound carto::Divider< AimsVector< T, D >, U >...
Generating docs for compound carto::AimsDataInfo...
Generating docs for compound carto::SingleOption< aims::Reader< T > >...
Generating docs for compound carto::SingleOption< aims::Writer< T > >...
Generating docs for compound carto::DataTypeCode< AimsTimeSurface< D, T > >...
Generating docs for compound carto::DataTypeCode< AimsTimeSurface< 2, T > >...
Generating docs for compound carto::DataTypeCode< AimsTimeSurface< 4, T > >...
Generating docs for compound carto::DataTypeCode< TimeTexture< T > >...
Generating docs for compound carto::DataTypeCode< aims::SparseMatrix >...
Generating docs for compound carto::DataTypeCode< aims::SparseOrDenseMatrix >...
Generating docs for compound carto::DataTypeCode< aims::AffineTransformation3d >...
Generating docs for compound carto::RawConverter< aims::BucketMap< INP >, aims::BucketMap< OUTP > >...
Generating docs for compound carto::RawConverter< aims::BucketMap< INP >, rc_ptr< Volume< OUTP > > >...
Generating docs for compound carto::RawConverter< aims::BucketMap< INP >, VolumeRef< OUTP > >...
Generating docs for compound carto::RawConverter< aims::BucketMap< Void >, rc_ptr< Volume< OUTP > > >...
Generating docs for compound carto::RawConverter< aims::BucketMap< Void >, VolumeRef< OUTP > >...
Generating docs for compound carto::RawConverter< rc_ptr< Volume< INP > >, aims::BucketMap< OUTP > >...
Generating docs for compound carto::RawConverter< VolumeRef< INP >, aims::BucketMap< OUTP > >...
Generating docs for compound carto::RawConverter< rc_ptr< Volume< INP > >, aims::BucketMap< Void > >...
Generating docs for compound carto::RawConverter< VolumeRef< INP >, aims::BucketMap< Void > >...
Generating docs for compound carto::ConverterAllocator< aims::BucketMap< INP >, aims::BucketMap< OUTP > >...
Generating docs for compound carto::ConverterAllocator< aims::BucketMap< INP >, rc_ptr< Volume< OUTP > > >...
Generating docs for compound carto::ConverterAllocator< aims::BucketMap< INP >, VolumeRef< OUTP > >...
Generating docs for compound carto::RawConverter< INP, AimsHSV >...
Generating docs for compound carto::RawConverter< Ai[ 75%] Built target AimsSumPETFrame
[ 75%] Built target AimsAttributedViewer
[ 75%] Built target AimsLabelSelector
Consolidate compiler generated dependencies of target ylIsoCurvature
Consolidate compiler generated dependencies of target ylLaplacian
msHSV, OUTP >...
Generating docs for compound carto::RawConverter< AimsHSV, AimsRGB >...
Generating docs for compound carto::RawConverter< AimsHSV, AimsRGBA >...
Generating docs for compound carto::RawConverter< AimsRGB, AimsHSV >...
Generating docs for compound carto::RawConverter< AimsRGBA, AimsHSV >...
Generating docs for compound carto::RawConverter< INP, AimsRGB >...
Generating docs for compound carto::RawConverter< INP, AimsRGBA >...
Generating docs for compound carto::RawConverter< AimsRGB, OUTP >...
Generating docs for compound carto::RawConverter< AimsRGBA, OUTP >...
Generating docs for compound carto::RawConverter< AimsRGB, AimsRGBA >...
Generating docs for compound carto::RawConverter< AimsRGBA, AimsRGB >...
Generating docs for compound carto::RawConverter< AimsVector< T, D >, AimsRGB >...
Generating docs for compound carto::RawConverter< AimsRGB, AimsVector< T, D > >...
Generating docs for compound carto::RawConverter< AimsVector< T, D >, AimsRGBA >...
Generating docs for compound carto::RawConverter< AimsRGBA, AimsVector< T, D > >...
Generating docs for compound carto::RawConverter< TimeTexture< INP >, TimeTexture< OUTP > >...
Generating docs for compound carto::RawConverter< carto::VolumeRef< INP >, carto::VolumeRef< OUTP > >...
Generating docs for compound carto::Rescaler< carto::VolumeRef< INP >, carto::VolumeRef< OUTP > >...
Generating docs for compound carto::RawConverter< carto::VolumeRef< INP >, carto::VolumeRef< INP > >...
Generating docs for compound carto::ShallowConverter< carto::VolumeRef< INP >, carto::VolumeRef< INP > >...
Generating docs for compound carto::ConverterAllocator< carto::VolumeRef< INP >, carto::VolumeRef< OUTP > >...
Generating docs for compound carto::ConverterAllocator< carto::VolumeRef< INP >, carto::VolumeRef< INP > >...
Generating docs for compound carto::ConverterSwitch< carto::VolumeRef< INP >, carto::VolumeRef< INP >, false >...
Generating docs for compound carto::ConverterSwitch< carto::VolumeRef< INP >, carto::VolumeRef< INP >, true >...
Generating docs for compound carto::SmartConverter< carto::VolumeRef< INP >, carto::VolumeRef< INP > >...
Generating docs for compound carto::Rescaler< VolumeRef< AimsVector< T, D > >, VolumeRef< AimsRGB > >...
Generating docs for compound carto::Rescaler< VolumeRef< AimsRGB >, VolumeRef< AimsVector< T, D > > >...
Generating docs for namespace carto::internal
Generating docs for compound carto::internal::VolumePrinter...
Generating docs for compound carto::internal::VolumePrinter< OUTP, true >...
Generating docs for compound carto::internal::VolumePrinter< OUTP, false >...
Generating docs for namespace internal
Generating docs for compound internal::thresh1...
Generating docs for compound internal::between_with_bounds...
Generating docs for compound internal::between_with_upper_bound...
Generating docs for compound internal::between_with_lower_bound...
Generating docs for compound internal::between_without_bounds...
Generating docs for compound internal::outside_with_bounds...
Generating docs for compound internal::outside_with_upper_bound...
Generating docs for compound internal::outside_with_lower_bound...
Generating docs for compound internal::outside_without_bounds...
Generating docs for compound internal::thresh2...
Generating docs for compound internal::clip1...
Generating docs for compound internal::rel_between_with_bounds...
Generating docs for compound internal::rel_between_with_lower_bound...
Generating docs for compound internal::rel_between_with_upper_bound...
Generating docs for compound internal::rel_between_without_bounds...
Generating docs for compound internal::clip2...
Generating docs for compound internal::thresh1_bin...
Generating docs for compound internal::thresh2_bin...
Generating docs for namespace soma
Generating docs for compound soma::FsAnnotFormatChecker...
Generating docs for compound soma::FsAnnotFormatReader...
Generating docs for compound soma::FsCurvFormatChecker...
Generating docs for compound soma::FsCurvFormatReader...
Generating docs for compound soma::FsSurfFormatChecker...
Generating docs for compo[ 75%] Built target ylLaplacian
[ 75%] Built target ylIsoCurvature
Consolidate compiler generated dependencies of target ylAdvectPath
Consolidate compiler generated dependencies of target ylAdvectEuclidean
[ 75%] Built target ylAdvectPath
[ 75%] Built target ylAdvectEuclidean
Consolidate compiler generated dependencies of target ylAdvectTubes
Consolidate compiler generated dependencies of target ylAdvectValues
[ 75%] Built target ylAdvectTubes
[ 75%] Built target ylAdvectValues
Consolidate compiler generated dependencies of target ylPropagateAlongField
Consolidate compiler generated dependencies of target ylLabelEachVoxel
[ 75%] Built target ylPropagateAlongField
[ 75%] Built target ylLabelEachVoxel
Consolidate compiler generated dependencies of target ylMergeCortexColumnRegions
Consolidate compiler generated dependencies of target ylMakeTraversePseudoAreaMap
[ 75%] Built target ylMergeCortexColumnRegions
[ 75%] Built target ylMakeTraversePseudoAreaMap
Consolidate compiler generated dependencies of target VipBiasCorrection
Consolidate compiler generated dependencies of target ylUpwindDistance
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:09,673::INFO::Found '0' pipeline(s) in 'deepsulci.sulci_labeling.capsul'.
[ 75%] Built target VipBiasCorrection
[ 75%] Built target ylUpwindDistance
Consolidate compiler generated dependencies of target VipClosing
Consolidate compiler generated dependencies of target VipCovarianceMatrix
[ 75%] Built target VipClosing
[ 75%] Built target VipCovarianceMatrix
Consolidate compiler generated dependencies of target VipDeriche
Consolidate compiler generated dependencies of target VipDilation
[ 75%] Built target VipDeriche
[ 75%] Built target VipDilation
Consolidate compiler generated dependencies of target VipDistanceMap
done
Consolidate compiler generated dependencies of target VipErosion
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv...
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv' not fetchable due to <class 'FileNotFoundError'>: [Errno 2] No such file or directory: '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv'
[autosummary] generating autosummary for: ana_notebook.ipynb, auto_examples/activateaction.rst, auto_examples/addMenuEntry.rst, auto_examples/aimsvolumetest.rst, auto_examples/anaevensimplerviewer.rst, auto_examples/anagraphannotate.rst, auto_examples/anatomistapiTests.rst, auto_examples/bvProcessSocket.rst, auto_examples/control.rst, auto_examples/customcommands.rst, ..., pyanatomist_headless.rst, pyanatomist_howto.rst, pyanatomist_notebook.rst, pyanatomist_pyaims_tutorial.rst, pyanatomist_socket.rst, pyanatomist_threaded.rst, pyanatomist_tutorial.rst, pyanatomist_tutorial_nb.ipynb, pyanatomist_wip.rst, sg_execution_times.rst
[ 75%] Built target VipDistanceMap
[ 75%] Built target VipErosion
Consolidate compiler generated dependencies of target VipExtEdge
Consolidate compiler generated dependencies of target VipFileDump
[ 75%] Built target VipExtEdge
[ 75%] Built target VipFileDump
Consolidate compiler generated dependencies of target VipFoldArg
Consolidate compiler generated dependencies of target VipFoetusHomotopicSnake
[ 75%] Built target VipFoldArg
[ 75%] Built target VipFoetusHomotopicSnake
Consolidate compiler generated dependencies of target VipGeometry
Consolidate compiler generated dependencies of target VipFoldArgAtt
[ 75%] Built target VipGeometry
[ 75%] Built target VipFoldArgAtt
Consolidate compiler generated dependencies of target VipGetHead
Consolidate compiler generated dependencies of target VipGetBrain
und soma::FsSurfFormatReader...
Generating docs for compound soma::LtaFormatChecker...
Generating docs for compound soma::LtaFormatReader...
Generating docs for compound soma::LtaT3DFormatReader...
Generating docs for compound soma::TrmFormatChecker...
Generating docs for compound soma::TrmFormatWriter...
Generating docs for compound soma::Trm3DFormatWriter...
Generating docs for compound soma::TrmFormatReader...
Generating docs for compound soma::TrmT3DFormatReader...
Generating docs for compound soma::TrmGraphFormatChecker...
Generating docs for compound soma::TrmGraphFormatReader...
Generating docs for compound soma::TrmGraphFormatWriter...
Generating docs for compound soma::TrmInGraphFormatChecker...
Generating docs for compound soma::TrmInGraphFormatReader...
Generating docs for compound soma::TrmComposeFormatChecker...
Generating docs for compound soma::TrmChainFormatChecker...
Generating docs for compound soma::TrmComposeFormatReader...
Generating docs for compound soma::TrmChainFormatReader...
Generating docs for compound soma::TrmHeaderFormatChecker...
Generating docs for compound soma::TrmHeaderFormatReader...
Generating docs for compound soma::XfmFormatChecker...
Generating docs for compound soma::XfmFormatReader...
Generating docs for compound soma::XfmT3DFormatReader...
Generating docs for compound soma::XfmFormatWriter...
Generating docs for compound soma::Xfm3DFormatWriter...
Generating docs for compound std::numeric_limits< carto::Volume< _Tp > >...
Generating docs for compound std::numeric_limits< carto::VolumeRef< _Tp > >...
Generating graph info page...
Generating directory documentation...
Generating dependency graph for directory aims
Generating dependency graph for directory aims/border
Generating dependency graph for directory aims/bucket
Generating dependency graph for directory aims/color
Generating dependency graph for directory aims/connectivity
Generating dependency graph for directory aims/curve
Generating dependency graph for directory aims/data
Generating dependency graph for directory aims/def
Generating dependency graph for directory aims/features
Generating dependency graph for directory aims/fibers
Generating dependency graph for directory aims/getopt
Generating dependency graph for directory aims/graph
Generating dependency graph for directory aims/io
Generating dependency graph for directory aims/io_soma
Generating dependency graph for directory aims/math
Generating dependency graph for directory aims/mesh
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Failed to import anatomist.altas_viewer.
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* AttributeError: module 'anatomist' has no attribute 'altas_viewer'
* ModuleNotFoundError: No module named 'anatomist.altas_viewer'
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computation time summary:
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:10,285::INFO::Pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.png'.
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[ 87%] Built target siParcellation
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:10,328::INFO::Pipeline 'morphologist.capsul.fslnormalization.FSLNormalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLNormalization.png'.
[ 87%] Built target siSulcalParcellation
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Consolidate compiler generated dependencies of target AimsAdaptiveSelVoxel
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:10,364::INFO::Pipeline 'morphologist.capsul.fslnormalization.FSLnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.png'.
[ 87%] Built target biodpy
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[ 87%] Built target AimsBorderInfo
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:10,400::INFO::Pipeline 'morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.png'.
[ 87%] Built target AimsFovAdapt
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Consolidate compiler generated dependencies of target AimsGL2Activity
Consolidate compiler generated dependencies of target AimsIndividStackSlices
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[ 87%] Built target AimsGL2Activity
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Consolidate compiler generated dependencies of target AimsMidPlaneAlign
Consolidate compiler generated dependencies of target bioDetectSlices
reading sources... [ 63%] api/qt_gui
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:10,443::INFO::Pipeline 'morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM.png'.
Consolidate compiler generated dependencies of target bioModelClassify
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[ 87%] Built target bioDetectSlices
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[ 87%] Built target bioprocessing
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:10,496::INFO::Pipeline 'morphologist.capsul.axon.sulcilabelling.SulciLabelling' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabelling.SulciLabelling.png'.
Consolidate compiler generated dependencies of target bioKMeans
Consolidate compiler generated dependencies of target constelBundlesFiltering
Consolidate compiler generated dependencies of target AimsSparseMatrixSmoothing
Consolidate compiler generated dependencies of target constelConnectionDensityTexture
[ 87%] Built target bioKMeans
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[ 87%] Built target constelConnectivityMatrix
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writing output... [ 21%] pyaims_aimsalgo_examples
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writing output... [ 28%] pyaims_algo
[ 87%] Built target constelSelectFibersFromMesh
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:10,585::INFO::Pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.brainorientation.BrainOrientation.png'.
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reading sources... [100%] pyanatomist_notebook
Consolidate compiler generated dependencies of target AimsCorticalThickness
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:10,620::INFO::Pipeline 'morphologist.capsul.axon.corticalfoldsgraphupgradefromold.CorticalFoldsGraphUpgradeFromOld' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.corticalfoldsgraphupgradefromold.CorticalFoldsGraphUpgradeFromOld.png'.
Consolidate compiler generated dependencies of target AimsCoordinateGridMesh
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:10,661::INFO::Pipeline 'morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.png'.
[ 91%] Built target AimsParameterizeGyri
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:10,693::INFO::Pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.png'.
[ 91%] Built target surfStructuralAnalysis
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[ 91%] Built target AimsCheck2DCoordinates
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:10,736::INFO::Pipeline 'morphologist.capsul.spmnormalization.SPMnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.png'.
Consolidate compiler generated dependencies of target AimsPlotCoordinatesOnMesh
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[ 91%] Built target AimsMeshCoordinatesToDecimated
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Consolidate compiler generated dependencies of target AimsCoordinatesToIndex
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[ 91%] Built target PlotFociForValidation
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Consolidate compiler generated dependencies of target AimsInterpolateVolumeToSurface
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writing output... [ 35%] pyaims_api_aims
[ 91%] Built target AimsGeodesicPath
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[ 91%] Built target aimsgui-doxygen
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Consolidate compiler generated dependencies of target anatomist-bin
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[ 91%] Built target AimsReadDpy
warning: Tag 'DETAILS_AT_TOP' at line 162 of file '/casa/host/build/build_files/aims-free/aimsalgo/doxygen/Doxyfile' has become obsolete.
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warning: Tag 'XML_SCHEMA' at line 948 of file '/casa/host/build/build_files/aims-free/aimsalgo/doxygen/Doxyfile' has become obsolete.
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warning: Tag 'XML_DTD' at line 954 of file '/casa/host/build/build_files/aims-free/aimsalgo/doxygen/Doxyfile' has become obsolete.
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warning: Tag 'PERL_PATH' at line 1115 of file '/casa/host/build/build_files/aims-free/aimsalgo/doxygen/Doxyfile' has become obsolete.
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warning: Tag 'MSCGEN_PATH' at line 1136 of file '/casa/host/build/build_files/aims-free/aimsalgo/doxygen/Doxyfile' has become obsolete.
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warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value
Using the default: a4!
[ 91%] Built target anatomist-bin
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Consolidate compiler generated dependencies of target AimsAmyloidDensity
Consolidate compiler generated dependencies of target AimsAffineRegister
Consolidate compiler generated dependencies of target AimsAmyloidLoadAvgDistNeigh
Doxygen version used: 1.9.1
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Searching for example files...
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Reading formula repository...
Reading and parsing tag files
Reading tag file '/casa/host/build/Consolidate compiler generated dependencies of target AimsBorderCrop
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Consolidate compiler generated dependencies of target AimsEqualizer
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share/doc/aimsdata-5.2/doxygen/aimsdata.tag', location '../../aimsdata-5.2/doxygen'...
Reading tag file '/casa/host/build/share/doc/graph-5.2/doxygen/graph.tag', location '../../graph-5.2/doxygen'...
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Parsing files
Preprocessing /casa/host/build/include/aims/algorithm/imagealgorithm.h...
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Parsing file /casa/host/bui[ 91%] Built target AimsFovCentering
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Consolidate compiler generated dependencies of target AimsGridGenerate
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Preprocessing /casa/host/build/include/aims/estima[ 91%] Built target AimsGridGenerate
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Consolidate compiler generated dependencies of target AimsIndividSlices
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[ 91%] Built target AimsIndividSlices
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tion/msfunc.h...
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Preprocessing [ 91%] Built target AimsInterlaceVolumes
Consolidate compiler generated dependencies of target AimsInterpolate
Consolidate compiler generated dependencies of target AimsLabelReorder
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[ 91%] Built target AimsInterpolate
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Preprocessing /casa/host/build/include/aims/[ 91%] Built target AimsLabelReorder
[ 91%] Built target AimsMaskContour
/casa/host/build/include/aims/math/bspline.h:181: warning: unbalanced grouping commands
/casa/host/build/include/aims/math/bspline.h:193: warning: unbalanced grouping commands
Consolidate compiler generated dependencies of target AimsMergeFFDLabels
Consolidate compiler generated dependencies of target AimsMeshMatching
Consolidate compiler generated dependencies of target AimsMIBucketRegister
reading sources... [ 72%] api/sphinxext
math/ppca_d.h...
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Preprocessing [ 91%] Built target AimsMeshMatching
[ 91%] Built target AimsMergeFFDLabels
[ 91%] Built target AimsMIBucketRegister
Consolidate compiler generated dependencies of target AimsMidPlaneMask
Consolidate compiler generated dependencies of target AimsMosaic
Consolidate compiler generated dependencies of target AimsMultiRecal
/casa/host/build/include/aims/moment/triMoment.h...
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Parsing file /casa/host/build/include/aims/primalsketch/scaleLevel.h...
Preprocessing /casa/host/build/include/aims/primalsketch/smoother.h...
Parsing file /casa/host/build/[ 91%] Built target AimsMosaic
[ 91%] Built target AimsMidPlaneMask
[ 91%] Built target AimsMultiRecal
Consolidate compiler generated dependencies of target AimsOverlapInfo
Consolidate compiler generated dependencies of target AimsResampleFromFieldsData
Consolidate compiler generated dependencies of target AimsRebuildComp
include/aims/primalsketch/smoother.h...
Preprocessing /casa/host/build/include/aims/primalsketch/imageSmoother.h...
Parsing file /casa/host/build/include/aims/primalsketch/imageSmoother.h...
Preprocessing /casa/host/build/include/aims/primalsketch/surfaceSmoother.h...
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Preprocessing /casa/host/build/include/aims/primalsketch/primalSketch.h...
Parsing file /casa/host/build/include/aims/primalsketch/primalSketch.h...
Preprocessing /casa/host/build/include/aims/primalsketch/scaleSpaceBlob.h...
Parsing file /casa/host/build/include/aims/primalsketch/scaleSpaceBlob.h...
Preprocessing /casa/host/build/include/aims/primalsketch/primalSketch2graph.h...
Parsing file /casa/host/build/include/aims/primalsketch/primalSketch2graph.h...
Preprocessing /casa/host/build/include/aims/primalsketch/primalSketchUtil.h...
Parsing file /casa/host/build/include/aims/primalsketch/primalSketchUtil.h...
Preprocessing /casa/host/build/include/aims/primalsketch/coupledSmoother.h...
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Preprocessing /casa/host/build/include/aims/primalsketch/imageCoupledSmoother.h...
Parsing file /casa/host/build/include/aims/primalsketch/imageCoupledSmoother.h...
Preprocessing /casa/host/build/include/aims/primalsketch/coupledDiffusion2DSmoother.h...
Parsing file /casa/host/build/include/aims/primalsketch/coupledDiffusion2DSmoother.h...
Preprocessing /casa/host/build/include/aims/primalsketch/coupledDiffusion2DSmoother_d.h...
Parsing file /casa/host/build/include/aims/primalsketch/coupledDiffusion2DSmoother_d.h...
Preprocessing /casa/host/build/include/aims/pyramid/maxfunc.h...
Parsing file /casa/host/build/include/aims/pyramid/maxfunc.h...
Preprocessing /casa/host/build/include/aims/pyramid/meanfunc.h...
Parsing file /casa/host/build/include/aims/pyramid/meanfunc.h...
Preprocessing /casa/host/build/include/aims/pyramid/medfunc.h...
Parsing file /casa/host/build/include/aims/pyramid/medfunc.h...
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Parsing file /casa/host/build/include/aims/pyramid/pyramid_g.h...
Preprocessing /casa/host/build/include/aims/pyramid/pyramid.h...
Parsing file /casa/host/build/include/aims/pyramid/pyramid.h...
Preprocessing /casa/host/build/include/aims/pyramid/pyr-func.h...
Parsing file /casa/host/build/include/aims/pyramid/pyr-func.h...
Preprocessing /casa/host/build/include/aims/pyramid/convolutionsubsampler.h...
Parsing file /casa/host/build/include/aims/pyramid/convolutionsubsampler.h...
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Parsing file /casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h...
Preprocessing /casa/host/build/include/aims/pyramid/splinesubsampler.h...
Parsing file /casa/host/build/include/aims/pyramid/splinesubsampler.h...
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Parsing file /casa/host/build/include/aims/pyramid/splinesubsampler_d.h...
Preprocessing /casa/host/build/include/aims/pyramid/movingaveragesubsampler.h...
Parsing file /casa/host/build/include/aims/pyramid/movingaveragesubsampler.h...
Preprocessing /casa/host/build/include/aims/pyramid/splinepyramid.h...
Parsing file /casa/host/build/include/aims/pyramid/splinepyramid.h...
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Parsing file /casa/host/build/include/aims/pyramid/splinepyramid_d.h...
Preprocessing /casa/host/build/include/aims/pyramid/subsamplingpyramid.h...
Parsing file /casa/host/build/include/aims/pyramid/subsamplingpyramid.h...
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Parsing file /casa/host/build/include/aims/pyramid/subsamplingpyramid_d.h...
Preprocessing /casa/host/build/include/aims/registration/block_matching.h...
Parsing file /casa/host/build/include/aims/registration/block_matching.h...
Preprocessing /casa/host/build/include/aims/registration/block_matching_d.h...
Parsing file /casa/host/build/include/aims/registration/block_matchin[ 91%] Built target AimsOverlapInfo
[ 91%] Built target AimsRebuildComp
[ 91%] Built target AimsResampleFromFieldsData
/casa/host/build/include/aims/resampling/masklinresampler.h:100: warning: Found ';' while parsing initializer list! (doxygen could be confused by a macro call without semicolon)
g_d.h...
Preprocessing /casa/host/build/include/aims/registration/displacement_field.h...
Parsing file /casa/host/build/include/aims/registration/displacement_field.h...
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Preprocessing /casa/host/build/include/aims/registration/scale_control.h...
Parsing file /casa/host/build/include/aims/registration/scale_control.h...
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Parsing file /casa/host/build/include/aims/registration/transformation.h...
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Parsing file /casa/host/build/include/aims/registration/transformation_d.h...
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Preprocessing /casa/host/build/include/aims/resampling/generalsampler.h...
Parsing file /casa/host/build/include/aims/resampling/generalsampler.h...
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Parsing file /casa/host/build/include/aims/resampling/harmonicCageResampler.h...
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Parsing file /casa/host/build/include/aims/resampling/linearresampler.h...
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Parsing file /casa/host/build/include/aims/resampling/majoritylabelresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/masklinresampler.h...
Parsing file /casa/host/build/include/aims/resampling/masklinresampler.h...
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Parsing file /casa/host/build/include/aims/resampling/masklinresampler_d.h...
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Parsing file /casa/host/build/include/aims/resampling/meshToVoxelsResampler.h...
Preprocessing /casa/host/build/include/aims/resampling/meshToVoxelsResampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/meshToVoxelsResampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/nearestneighborresampler.h...
Parsing file /casa/host/build/include/aims/resampling/nearestneighborresampler.h...
Preprocessing /casa/host/build/include/aims/resampling/nearestneighborresampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/nearestneighborresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/quadraticresampler.h...
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Parsing file /casa/host/build/include/aims/resampling/quadraticresampler_d.h...
PreprConsolidate compiler generated dependencies of target AimsRgbToHsv
Consolidate compiler generated dependencies of target AimsSamplingInfo
/casa/host/build/python/anatomist/cpp/followerobject.py:docstring of anatomist.cpp.followerobject:6: WARNING: Inline literal start-string without end-string.
WARNING: autodoc: failed to import module 'altas_viewer' from module 'anatomist'; the following exception was raised:
No module named 'anatomist.altas_viewer'
looking for now-outdated files... none found
pickling environment... Consolidate compiler generated dependencies of target AimsRoiOverlap
ocessing /casa/host/build/include/aims/resampling/quarticresampler.h...
Parsing file /casa/host/build/include/aims/resampling/quarticresampler.h...
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Parsing file /casa/host/build/include/aims/resampling/quinticresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/resampling_g.h...
Parsing file /casa/host/build/include/aims/resampling/resampling_g.h...
Preprocessing /casa/host/build/include/aims/resampling/resampler.h...
Parsing file /casa/host/build/include/aims/resampling/resampler.h...
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Parsing file /casa/host/build/include/aims/resampling/resampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/resamplerfactory.h...
Parsing file /casa/host/build/include/aims/resampling/resamplerfactory.h...
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Parsing file /casa/host/build/include/aims/resampling/resamplerfactory_d.h...
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Parsing file /casa/host/build/include/aims/resampling/extremadifferencesubsampling.h...
Preprocessing /casa/host/build/include/aims/resampling/majoritysubsampling.h...
Parsing file /casa/host/build/include/aims/resampling/majoritysubsampling.h...
Preprocessing /casa/host/build/include/aims/resampling/maxsubsampling.h...
Parsing file /casa/host/build/include/aims/resampling/maxsubsampling.h...
Preprocessing /casa/host/build/include/aims/resampling/meansubsampling.h...
Parsing file /casa/host/build/include/aims/resampling/meansubsampling.h...
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Parsing file /casa/host/build/include/aims/resampling/medianresampler.h...
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Parsing file /casa/host/build/include/aims/resampling/medianresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/mediansubsampling.h...
Parsing file /casa/host/build/include/aims/resampling/mediansubsampling.h...
Preprocessing /casa/host/build/include/aims/resampling/minsubsampling.h...
Parsing file /casa/host/build/include/aims/resampling/minsubsampling.h...
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Parsing file /casa/host/build/include/aims/resampling/notnullmediansubsampling.h...
Preprocessing /casa/host/build/include/aims/resampling/sumsubsampling.h...
Parsing file /casa/host/build/include/aims/resampling/sumsubsampling.h...
Preprocessing /casa/host/build/include/aims/resampling/samplable.h...
Parsing file /casa/host/build/include/aims/resampling/samplable.h...
Preprocessing /casa/host/build/include/aims/resampling/samplable_cone.h...
Parsing file /casa/host/build/include/aims/resampling/samplable_cone.h...
Preprocessing /casa/host/build/include/aims/resampling/samplable_sphere.h...
Parsing file /casa/host/build/include/aims/resampling/samplable_sphere.h...
Preprocessing /casa/host/build/include/aims/resampling/sampler.h...
Parsing file /casa/host/build/include/aims/resampling/sampler.h...
Preprocessing /casa/host/build/include/aims/resampling/sixthorderresampler.h...
Parsing file /casa/host/build/include/aims/resampling/sixthorderresampler.h...
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Parsing file /casa/host/build/include/aims/resampling/sixthorderresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/seventhorderresampler.h...
Parsing file /casa/host/build/inclu[ 91%] Built target AimsRgbToHsv
[ 91%] Built target AimsSamplingInfo
[ 91%] Built target AimsRoiOverlap
Consolidate compiler generated dependencies of target AimsSeparateComp
Consolidate compiler generated dependencies of target AimsSegment2Modes
Consolidate compiler generated dependencies of target AimsStereologySampling
/casa/host/build/include/aims/signalfilter/elementfilterfactory.h:94: warning: File ended in the middle of a comment block! Perhaps a missing \endcode?
de/aims/resampling/seventhorderresampler.h...
Preprocessing /casa/host/build/include/aims/resampling/seventhorderresampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/seventhorderresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/splineresampler.h...
Parsing file /casa/host/build/include/aims/resampling/splineresampler.h...
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Parsing file /casa/host/build/include/aims/resampling/splineresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h...
Parsing file /casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h...
Preprocessing /casa/host/build/include/aims/resampling/polynomial.h...
Parsing file /casa/host/build/include/aims/resampling/polynomial.h...
Preprocessing /casa/host/build/include/aims/roi/clusterArg.h...
Parsing file /casa/host/build/include/aims/roi/clusterArg.h...
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Parsing file /casa/host/build/include/aims/roi/clusterArg_d.h...
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Parsing file /casa/host/build/include/aims/roi/roigtm.h...
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Parsing file /casa/host/build/include/aims/scalespace/bucketblob.h...
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Parsing file /casa/host/build/include/aims/scalespace/bucketblob_d.h...
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Parsing file /casa/host/build/include/aims/scalespace/meshBlob.h...
Preprocessing /casa/host/build/include/aims/scalespace/meshDiffuse.h...
Parsing file /casa/host/build/include/aims/scalespace/meshDiffuse.h...
Preprocessing /casa/host/build/include/aims/signalfilter/signalfilter_g.h...
Parsing file /casa/host/build/include/aims/signalfilter/signalfilter_g.h...
Preprocessing /casa/host/build/include/aims/signalfilter/convol.h...
Parsing file /casa/host/build/include/aims/signalfilter/convol.h...
Preprocessing /casa/host/build/include/aims/signalfilter/convolutionfilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/convolutionfilter.h...
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Parsing file /casa/host/build/include/aims/signalfilter/convolutionfilter_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/differencefilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/differencefilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/diffusionSmoother_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/diffusionSmoother_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/diffusionSmoother.h...
Parsing file /casa/host/build/include/aims/signalfilter/diffusionSmoother.h...
Preprocessing /casa/host/build/include/aims/signalfilter/elementfilterfactory.h...
Parsing file /casa/host/build/include/aims/signalfilter/elementfilterfactory.h...
Preprocessing /casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction_element.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction_element.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction_element_rgb.h...
Parsing file /casa/host/build/include/aims[ 91%] Built target AimsSeparateComp
[ 91%] Built target AimsSegment2Modes
[ 91%] Built target AimsStereologySampling
Consolidate compiler generated dependencies of target AimsSubSamplingConservative
Consolidate compiler generated dependencies of target AimsStereotaxy
/signalfilter/filteringfunction_element_rgb.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction_element_rgb_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction_element_rgb_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction_linear.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction_linear.h...
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Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction_linear_rgb.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction_linear_rgb.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction_linear_rgb_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction_linear_rgb_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringimagealgorithm.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringimagealgorithm.h...
Preprocessing /casa/host/build/include/aims/signalfilter/firfilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/firfilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/g2dsmooth.h...
Parsing file /casa/host/build/include/aims/signalfilter/g2dsmooth.h...
Preprocessing /casa/host/build/include/aims/signalfilter/g3dsmooth.h...
Parsing file /casa/host/build/include/aims/signalfilter/g3dsmooth.h...
Preprocessing /casa/host/build/include/aims/signalfilter/gaborfilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/gaborfilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/gcoef.h...
Parsing file /casa/host/build/include/aims/signalfilter/gcoef.h...
Preprocessing /casa/host/build/include/aims/signalfilter/gcolumns.h...
Parsing file /casa/host/build/include/aims/signalfilter/gcolumns.h...
Preprocessing /casa/host/build/include/aims/signalfilter/ghessian.h...
Parsing file /casa/host/build/include/aims/signalfilter/ghessian.h...
Preprocessing /casa/host/build/include/aims/signalfilter/glines.h...
Parsing file /casa/host/build/include/aims/signalfilter/glines.h...
Preprocessing /casa/host/build/include/aims/signalfilter/grecurse.h...
Parsing file /casa/host/build/include/aims/signalfilter/grecurse.h...
Preprocessing /casa/host/build/include/aims/signalfilter/gslices.h...
Parsing file /casa/host/build/include/aims/signalfilter/gslices.h...
Preprocessing /casa/host/build/include/aims/signalfilter/parity.h...
Parsing file /casa/host/build/include/aims/signalfilter/parity.h...
Preprocessing /casa/host/build/include/aims/signalfilter/gjacobian.h...
Parsing file /casa/host/build/include/aims/signalfilter/gjacobian.h...
Preprocessing /casa/host/build/include/aims/signalfilter/ggradient.h...
Parsing file /casa/host/build/include/aims/signalfilter/ggradient.h...
Preprocessing /casa/host/build/include/aims/signalfilter/gframes.h...
Parsing file /casa/host/build/include/aims/signalfilter/gframes.h...
Preprocessing /casa/host/build/include/aims/signalfilter/medianfilter.h...
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Parsing file /casa/host/build/inc/casa/host/build/include/aims/signalfilter/linearfilterfactory.h:76: warning: File ended in the middle of a comment block! Perhaps a missing \endcode?
Consolidate compiler generated dependencies of target AimsWatershed
[ 91%] Built target AimsSubSamplingConservative
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lude/aims/signalfilter/sumfilter.h...
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Parsing[ 91%] Built target AimsWatershed
reading sources... [ 81%] api/study_config
Consolidate compiler generated dependencies of target AimsSeededWatershed
Consolidate compiler generated dependencies of target bioCellBoundingBoxesGenerate
Consolidate compiler generated dependencies of target bioCellEvaluate
[ 91%] Built target AimsSeededWatershed
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[ 91%] Built target bioCellEvaluate
/casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag:1: warning: Internal inconsistency: scope for class carto::conversion::Helper::yes not found!
Consolidate compiler generated dependencies of target bioComponentConnexe
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[ 91%] Built target bioComponentConnexe
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[ 91%] Built target bioExtractAmyloidLoad
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Consolidate compiler generated dependencies of target AimsAdaptiveGaussianSmoothing
[ 91%] Built target bioStatDominanceAppli
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[ 91%] Built target AimsAdaptiveGaussianSmoothing
Consolidate compiler generated dependencies of target AimsEdgeExtract
Consolidate compiler generated dependencies of target AimsExtremaMap
Consolidate compiler generated dependencies of target AimsRegionGrowingExtrema
done
checking consistency... /casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/pyanatomist_addons.rst: WARNING: document isn't included in any toctree
done
preparing documents... [ 91%] Built target AimsEdgeExtract
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done
writing output... [ 2%] ana_notebook
[ 91%] Built target AimsRegionGrowingExtrema
Consolidate compiler generated dependencies of target AimsSigmaImageCalculate
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[ 91%] Built target AimsSigmaImageCalculate
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warning: Tag 'DETAILS_AT_TOP' at line 162 of file '/casa/host/build/build_files/anatomist-free/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'SHOW_DIRECTORIES' at line 408 of file '/casa/host/build/build_files/anatomist-free/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
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To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
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To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
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To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
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To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'PERL_PATH' at line 1115 of file '/casa/host/build/build_files/anatomist-free/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'MSCGEN_PATH' at line 1136 of file '/casa/host/build/build_files/anatomist-free/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value
Using the default: a4!
Doxygen version used: 1.9.1
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Searching for files in directory /casa/host/build/[ 91%] Generating EcatVolReverse help file ...
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_iterator::const_iterator()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_iterator::const_iterator(carto::VolumeRef< T > vol, int y, int z, int t)
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_iterator::const_iterator(iterator other)
<unknown>:1: warning: no uniquely matching class member found for
const std::pair< Point4d, const_LowLevelStorage > & aims::SparseVolume< carto::Volume< T > >::const_iterator::operator*() const
<unknown>:1: warning: no uniquely matching class member found for
const std::pair< Point4d, const_LowLevelStorage > * aims::SparseVolume< carto::Volume< T > >::const_iterator::operator->() const
<unknown>:1: warning: documented symbol 'const const_LowLevelStorage & aims::SparseVolume< carto::Volume< T > >::const_iterator::storage' was not declared or defined.
<unknown>:1: warning: no uniquely matching class member found for
bool aims::SparseVolume< carto::Volume< T > >::const_iterator::operator==(const const_iterator &x) const
<unknown>:1: warning: no uniquely matching class member found for
bool aims::SparseVolume< carto::Volume< T > >::const_iterator::operator!=(const const_iterator &x) const
<unknown>:1: warning: no uniquely matching class member found for
const_iterator & aims::SparseVolume< carto::Volume< T > >::const_iterator::operator++()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::const_LowLevelStorage()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::const_LowLevelStorage(const carto::VolumeRef< T > vol, int y, int z, int t)
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::const_LowLevelStorage(const LowLevelStorage &other)
<unknown>:1: warning: no uniquely matching class member found for
const_iterator aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::begin() const
<unknown>:1: warning: no uniquely matching class member found for
const_iterator aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::end() const
<unknown>:1: warning: no uniquely matching class member found for
carto::VolumeRef< T > aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::volume() const
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::iterator::iterator()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::iterator::iterator(carto::VolumeRef< T > vol, int y, int z, int t)
<unknown>:1: warning: no uniquely matching class member found for
std::pair< Point4d, LowLevelStorage > & aims::SparseVolume< carto::Volume< T > >::iterator::operator*()
<unknown>:1: warning: no uniquely matching class member found for
std::pair< Point4d, LowLevelStorage > * aims::SparseVolume< carto::Volume< T > >::iterator::operator->()
<unknown>:1: warning: documented symbol 'LowLevelStorage & aims::SparseVolume< carto::Volume< T > >::iterator::storage' was not declared or defined.
<unknown>:1: warning: no uniquely matching class member found for
bool aims::SparseVolume< carto::Volume< T > >::iterator::operator==(const iterator &x) const
<unknown>:1: warning: no uniquely matching class member found for
bool aims::SparseVolume< carto::Volume< T > >::iterator::operator!=(const iterator &x) const
<unknown>:1: warning: no uniquely matching class member found for
iterator & aims::SparseVolume< carto::Volume< T > >::iterator::operator++()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::LowLevelStorage()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::LowLevelStorage(carto::VolumeRef< T > vol, int y, int z, int t)
<unknown>:1: warning: no uniquely matching class member found for
iterator aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::begin()
<unknown>:1: warning: no uniquely matching class member found for
const_iterator aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::begin() const
<unknown>:1: warning: no uniquely matching class member found for
iterator aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::end()
<unknown>:1: warning: no uniquely matching class member found for
const_iterator aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::end() const
<unknown>:1: warning: no uniquely matching class member found for
carto::VolumeRef< T > aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::volume() const
include/ecat+/io
Searching for files in directory /casa/host/build/include/graph
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Searching for files in directory /casa/ho/casa/host/build/include/aims/histogram/cumulated.h:72: warning: member doit belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/histogram/cumulated.h:83: warning: member doit belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/histogram/cumulated.h:105: warning: member valueForPercentage belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:457: warning: member X belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:506: warning: member Y belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:539: warning: member Z belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:572: warning: member T belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:607: warning: member XX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:612: warning: member XY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:617: warning: member XZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:622: warning: member XT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:628: warning: member YX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:633: warning: member YY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:638: warning: member YZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:643: warning: member YT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:649: warning: member ZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:654: warning: member ZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:659: warning: member ZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:664: warning: member ZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:670: warning: member TX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:675: warning: member TY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:680: warning: member TZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:685: warning: member TT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:693: warning: member XXX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:698: warning: member XXY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:703: warning: member XXZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:708: warning: member XXT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:714: warning: member XYX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:719: warning: member XYY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:724: warning: member XYZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:729: warning: member XYT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:735: warning: member XZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:740: warning: member XZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:745: warning: member XZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:750: warning: member XZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:756: warning: member XTX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:761: warning: member XTY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:766: warning: member XTZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:771: warning: member XTT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:777: warning: member YXX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:782: warning: member YXY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:787: warning: member YXZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:792: warning: member YXT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:798: warning: member YYX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:803: warning: member YYY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:808: warning: member YYZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:813: warning: member YYT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:819: warning: member YZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:824: warning: member YZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:829: warning: member YZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:834: warning: member YZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:840: warning: member YTX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:845: warning: member YTY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:850: warning: member YTZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:855: warning: member YTT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:861: warning: member ZXX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:866: warning: member ZXY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:871: warning: member ZXZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:876: warning: member ZXT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:882: warning: member ZYX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:887: warning: member ZYY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:892: warning: member ZYZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:897: warning: member ZYT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:903: warning: member ZZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:908: warning: member ZZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:913: warning: member ZZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:918: warning: member ZZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:924: warning: member ZTX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:929: warning: member ZTY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:934: warning: member ZTZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:939: warning: member ZTT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:945: warning: member TXX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:950: warning: member TXY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:955: warning: member TXZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:960: warning: member TXT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:966: warning: member TYX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:971: warning: member TYY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:976: warning: member TYZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:981: warning: member TYT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:987: warning: member TZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:992: warning: member TZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:997: warning: member TZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1002: warning: member TZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1008: warning: member TTX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1013: warning: member TTY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1018: warning: member TTZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1023: warning: member TTT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/random.h:93: warning: member UniformRandom belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/random.h:144: warning: member GaussianRandom belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:66: warning: no matching class member found for
template < F >
aims::ConvolutionSubSampler< F >::ConvolutionSubSampler(const F &f, unsigned r)
Possible candidates:
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(unsigned r=2)'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const Point4du &r)'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const BasisFunction &bfunc, unsigned r)'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const std::vector< BasisFunction > &bfunc=std::vector< BasisFunction >(), const Point4du &r=Point4du(2, 2, 2, 2))'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const ConvolutionSubSampler &other)'
/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:76: warning: no matching class member found for
template < F >
aims::ConvolutionSubSampler< F >::ConvolutionSubSampler(const std::vector< F > &f, const Point4du &r)
Possible candidates:
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(unsigned r=2)'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const Point4du &r)'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const BasisFunction &bfunc, unsigned r)'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const std::vector< BasisFunction > &bfunc=std::vector< BasisFunction >(), const Point4du &r=Point4du(2, 2, 2, 2))'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const ConvolutionSubSampler &other)'
/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:87: warning: no matching class member found for
template < F >
aims::ConvolutionSubSampler< F >::ConvolutionSubSampler(const aims::ConvolutionSubSampler< F > &other)
Possible candidates:
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(unsigned r=2)'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const Point4du &r)'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const BasisFunction &bfunc, unsigned r)'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const std::vector< BasisFunction > &bfunc=std::vector< BasisFunction >(), const Point4du &r=Point4du(2, 2, 2, 2))'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const ConvolutionSubSampler &other)'
/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:284: warning: no uniquely matching class member found for
template < F >
void aims::ConvolutionSubSampler< F >::setBasisFunction(const F &func)
Possible candidates:
'void aims::ConvolutionSubSampler< BasisFunction >::setBasisFunction(const BasisFunction &func)' at line 95 of file /casa/host/build/include/aims/pyramid/convolutionsubsampler.h
'void aims::ConvolutionSubSampler< BasisFunction >::setBasisFunction(const std::vector< BasisFunction > &func)' at line 96 of file /casa/host/build/include/aims/pyramid/convolutionsubsampler.h
/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:290: warning: no uniquely matching class member found for
template < F >
void aims::ConvolutionSubSampler< F >::setBasisFunction(const std::vector< F > &func)
Possible candidates:
'void aims::ConvolutionSubSampler< BasisFunction >::setBasisFunction(const BasisFunction &func)' at line 95 of file /casa/host/build/include/aims/pyramid/convolutionsubsampler.h
'void aims::ConvolutionSubSampler< BasisFunction >::setBasisFunction(const std::vector< BasisFunction > &func)' at line 96 of file /casa/host/build/include/aims/pyramid/convolutionsubsampler.h
st/build/include/soma-io/Dicom
Searching for files in directory /casa/host/build/include/soma-io/Dicom/Bruker
Searching for files in directory /casa/host/build/include/soma-io/Dicom/DcmtkJpeg2000
Searching for files in directory /casa/host/build/include/soma-io/Dicom/GE
Searching for files in directory /casa/host/build/include/soma-io/Dicom/Philips
Searching for files in directory /casa/host/build/include/soma-io/Dicom/Siemens
Searching for files in directory /casa/host/build/include/soma-io/doc
Searching for files in directory /casa/host/build/include/soma-io/getopt
Searching for files in directory /casa/host/build/include/soma-io/image
Searching for files in directory /casa/host/build/include/soma-io/io
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Searching for files in directory /casa/host/build/include/soma-io/nifticlib/niftilib
Searching for files in directory /casa/host/build/include/soma-io/nifticlib/znzlib
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Searching for files in directory /casa/host/build/include/soma-io/Pattern
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Searching for files in directory /casa/host/build/include/soma-io/Transformation
Searching for files in directory /casa/host/build/include/soma-io/utilities
Searching for files in directory /casa/host/build/include/soma-io/Utils
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Searching for files in directory /casa/host/build/include/vidaIO/kernel
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Searching for files in directory /casa/host/build/include/vip/util
Searching for files in directory /casa/host/build/include/vip/vcomplex
Searching for files in directory /casa/host/build/include/vip/volume
Searching for example files...
Searching for images...
Searching for dot files...
Searching for msc files...
Searching for dia files...
Searching for files to exclude
Searching INPUT for files to process...
Reading and parsing tag files
Reading tag file '/casa/host/build/share/doc/aimsgui-5.2/doxygen//casa/host/build/include/aims/resampling/masklinresampler_d.h:59: warning: no uniquely matching class member found for
template < T >
void aims::MaskLinearResampler::doResample(const carto::Volume< T > &input_data, const soma::Transformation3d &inverse_transform, const T &background, const Point3df &output_location, T &output_value, int t) const
/casa/host/build/include/aims/resampling/masklinresampler_d.h:107: warning: no uniquely matching class member found for
template < T >
void aims::MaskLinearResampler::resample(const carto::Volume< T > &input_data, const aims::AffineTransformation3d &motion, const T &background, carto::Volume< T > &thing, bool verbose) const
/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:49: warning: no matching class member found for
template < F >
aims::ConvolutionFilter< F >::ConvolutionFilter(const F &f)
Possible candidates:
'aims::ConvolutionFilter< BasisFunction >::ConvolutionFilter(const BasisFunction &bfunc)'
'aims::ConvolutionFilter< BasisFunction >::ConvolutionFilter(const std::vector< BasisFunction > &bfunc=std::vector< BasisFunction >())'
'aims::ConvolutionFilter< BasisFunction >::ConvolutionFilter(const ConvolutionFilter &other)'
/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:58: warning: no matching class member found for
template < F >
aims::ConvolutionFilter< F >::ConvolutionFilter(const std::vector< F > &f)
Possible candidates:
'aims::ConvolutionFilter< BasisFunction >::ConvolutionFilter(const BasisFunction &bfunc)'
'aims::ConvolutionFilter< BasisFunction >::ConvolutionFilter(const std::vector< BasisFunction > &bfunc=std::vector< BasisFunction >())'
'aims::ConvolutionFilter< BasisFunction >::ConvolutionFilter(const ConvolutionFilter &other)'
/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:67: warning: no matching class member found for
template < F >
aims::ConvolutionFilter< F >::ConvolutionFilter(const aims::ConvolutionFilter< F > &other)
Possible candidates:
'aims::ConvolutionFilter< BasisFunction >::ConvolutionFilter(const BasisFunction &bfunc)'
'aims::ConvolutionFilter< BasisFunction >::ConvolutionFilter(const std::vector< BasisFunction > &bfunc=std::vector< BasisFunction >())'
'aims::ConvolutionFilter< BasisFunction >::ConvolutionFilter(const ConvolutionFilter &other)'
/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:231: warning: no uniquely matching class member found for
template < F >
void aims::ConvolutionFilter< F >::setBasisFunction(const F &func)
Possible candidates:
'void aims::ConvolutionFilter< BasisFunction >::setBasisFunction(const BasisFunction &func)' at line 97 of file /casa/host/build/include/aims/signalfilter/convolutionfilter.h
'void aims::ConvolutionFilter< BasisFunction >::setBasisFunction(const std::vector< BasisFunction > &func)' at line 99 of file /casa/host/build/include/aims/signalfilter/convolutionfilter.h
/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:237: warning: no uniquely matching class member found for
template < F >
void aims::ConvolutionFilter< F >::setBasisFunction(const std::vector< F > &func)
Possible candidates:
'void aims::ConvolutionFilter< BasisFunction >::setBasisFunction(const BasisFunction &func)' at line 97 of file /casa/host/build/include/aims/signalfilter/convolutionfilter.h
'void aims::ConvolutionFilter< BasisFunction >::setBasisFunction(const std::vector< BasisFunction > &func)' at line 99 of file /casa/host/build/include/aims/signalfilter/convolutionfilter.h
/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:58: warning: no uniquely matching class member found for
template < T >
void aims::ElementFilterFactory::init()
/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:85: warning: no uniquely matching class member found for
template < T >
std::map< std::string, carto::rc_ptr< ElementFilteringImageAlgorithm< T > > > & aims::ElementFilterFactory::_map()
/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:92: warning: documented symbol 'void aims::ElementFilterFactory::registerFilter' was not declared or defined.
/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:102: warning: no uniquely matching class member found for
template < T >
std::set< std::string > aims::ElementFilterFactory::names()
/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:113: warning: no uniquely matching class member found for
template < T >
ElementFilteringImageAlgorithm< T > * aims::ElementFilterFactory::create(const std::string &name, const StructuringElement &strel, carto::Object options)
/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:131: warning: no uniquely matching class member found for
template < T >
ElementFilteringImageAlgorithm< T > * aims::ElementFilterFactory::create(const std::string &name, carto::Object options)
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:142: warning: no uniquely matching class member found for
template < T >
T aims::MaxFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:148: warning: no uniquely matching class member found for
template < T >
T aims::MaxFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:161: warning: no uniquely matching class member found for
template < T >
T aims::MinFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:167: warning: no uniquely matching class member found for
template < T >
T aims::MinFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:180: warning: no uniquely matching class member found for
template < T >
T aims::MedianFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:186: warning: no uniquely matching class member found for
template < T >
T aims::MedianFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:199: warning: no uniquely matching class member found for
template < T >
T aims::NotNullMedianFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:205: warning: no uniquely matching class member found for
template < T >
T aims::NotNullMedianFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:218: warning: no uniquely matching class member found for
template < T >
T aims::MeanFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:224: warning: no uniquely matching class member found for
template < T >
T aims::MeanFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:237: warning: no uniquely matching class member found for
template < T >
T aims::NotNullMeanFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:243: warning: no uniquely matching class member found for
template < T >
T aims::NotNullMeanFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:256: warning: no uniquely matching class member found for
template < T >
T aims::MajorityFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:262: warning: no uniquely matching class member found for
template < T >
T aims::MajorityFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:275: warning: no uniquely matching class member found for
template < T >
T aims::NotNullMajorityFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:281: warning: no uniquely matching class member found for
template < T >
T aims::NotNullMajorityFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:294: warning: no uniquely matching class member found for
template < T >
T aims::ExtremaDifferenceFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:300: warning: no uniquely matching class member found for
template < T >
T aims::ExtremaDifferenceFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:313: warning: no uniquely matching class member found for
template < T >
T aims::SumFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:319: warning: no uniquely matching class member found for
template < T >
T aims::SumFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:332: warning: no uniquely matching class member found for
template < T >
T aims::VarFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:338: warning: no uniquely matching class member found for
template < T >
T aims::VarFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:351: warning: no uniquely matching class member found for
template < T >
T aims::StDevFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:357: warning: no uniquely matching class member found for
template < T >
T aims::StDevFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:125: warning: documented symbol 'aims::GaborFilterFunc::GaborFilterFunc' was not declared or defined.
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:141: warning: documented symbol 'aims::GaborFilterFunc::~GaborFilterFunc' was not declared or defined.
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:145: warning: no uniquely matching class member found for
template < T >
GaborFilterFunc< T > & aims::GaborFilterFunc::operator=(const GaborFilterFunc< T > &other)
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:164: warning: no uniquely matching class member found for
template < T >
void aims::GaborFilterFunc::setOptions(const carto::Object &options)
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:214: warning: no uniquely matching class member found for
template < T >
void aims::GaborFilterFunc::updateOptions(const carto::Object &options)
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:291: warning: no uniquely matching class member found for
template < T >
const std::vector< int > & aims::GaborFilterFunc::getAmplitude() const
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:297: warning: no matching file member found for
void aims::GaborFilterFunc::setKernel
Possible candidates:
'void setKernel()' at line 150 of file /casa/host/build/include/aims/signalfilter/filteringfunction_linear.h
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:357: warning: no uniquely matching class member found for
template < T >
T aims::GaborFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:46: warning: no uniquely matching class member found for
template < T >
void aims::LinearFilterFactory::init()
/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:58: warning: no uniquely matching class member found for
template < T >
std::map< std::string, carto::rc_ptr< LinearFilteringImageAlgorithm< T > > > & aims::LinearFilterFactory::_map()
/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:65: warning: documented symbol 'void aims::LinearFilterFactory::registerFilter' was not declared or defined.
/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:75: warning: no uniquely matching class member found for
template < T >
std::set< std::string > aims::LinearFilterFactory::names()
/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:86: warning: no uniquely matching class member found for
template < T >
LinearFilteringImageAlgorithm< T > * aims::LinearFilterFactory::create(const std::string &name, carto::Object options)
[ 91%] Generating AimsRTiff help file ...
aimsgui.tag', location '../../aimsgui-5.2/doxygen'...
Reading tag file '/casa/host/build/share/doc/aimsdata-5.2/doxygen/aimsdata.tag', location '../../aimsdata-5.2/doxygen'...
Reading tag file '/casa/host/build/share/doc/graph-5.2/doxygen/graph.tag', location '../../graph-5.2/doxygen'...
Reading tag file '/casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag', location '../../cartobase-5.2/doxygen'...
Reading tag file '/casa/host/build/share/doc/soma-io-5.2/doxygen/soma-io.tag', location '../../cartobase-5.2/doxygen'...
Reading tag file '/casa/host/build/share/doc/cartodata-5.2/doxygen/cartodata.tag', location '../../cartodata-5.2/doxygen'...
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Preprocessing /casa/host/build/include/anatomist/commands/cLoadGraphSubObjects.h...
Parsing file /casa/host/build/include/anatomist/commands/cLoadGraphSubObjects.h...
Preprocessing /casa/host/build/include/anatomist/commands/cLoadObject.h...
Parsing file /casa/host/build/include/anatomist/commands/cLoadObject.h...
Preprocessing /casa/host/build/include/anatomist/commands/cLoadObjects.h...
Parsing file /casa/host/build/include/anatomist/commands/cLoadObjects.h...
Preprocessing /casa/host/build/include/anatomist/commands/cLoadTransformation.h...
Parsing file /casa/host/build/include/anatomist/commands/cLoadTransformation.h...
Preprocessing /casa/host/build/include/anatomist/commands/cLoadTransformationGraph.h...
Parsing file /casa/host/build/include/anatomist/commands/cLoadTransformationGraph.h...
Preprocessing /casa/host/build/include/anatomist/commands/cNewId.h...
Parsing file /casa/host/build/include/anatomist/commands/cNewId.h...
Preprocessing /casa/host/build/include/anatomist/commands/cNewPalette.h...
Parsing file /casa/host/build/include/anatomist/commands/cNewPalette.h...
Preprocessing /casa/host/build/include/anatomist/commands/cObjectInfo.h...
Parsing file /casa/host/build/include/anatomist/commands/cObjectInfo.h...
Preprocessing /casa/host/build/include/anatomist/commands/cOutput.h...
Parsing file /casa/host/build/include/anatomist/commands/cOutput.h...
Preprocessing /casa/host/build/include/anatomist/commands/cPopupPalette.h...
Parsing file /casa/host/build/include/anatomist/commands/cPopupPalette.h...
Preprocessing /casa/host/build/include/anatomist/commands/cReloadObject.h...
Parsing file /casa/host/build/include/anatomist/commands/cReloadObject.h...
Preprocessing /casa/host/build/include/anatomist/commands/cRemoveObject.h...
Parsing file /casa/host/build/include/anatomist/commands/cRemoveObject.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSaveObject.h...
Parsing file /casa/host/build/include/anatomist/commands/cSaveObject.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSaveTransformation.h...
Parsing file /casa/host/build/include/anatomist/commands/cSaveTransformation.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSaveTransformationGraph.h...
Parsing file /casa/host/build/include/anatomist/commands/cSaveTransformationGraph.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSelect.h...
Parsing file /casa/host/build/include/anatomist/commands/cSelect.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSelectByHierarchy.h...
Parsing file /casa/host/build/include/anatomist/commands/cSelectByHierarchy.h...
Preprocessing /casa/host/build/include/anatomist/commands/cServer.h...
Parsing file /casa/host/build/include/anatomist/commands/cServer.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSetControl.h...
Parsing file /casa/host/build/include/anatomist/commands/cSetControl.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSetMaterial.h...
Parsing file /casa/host/build/include/anatomist/commands/cSetMaterial.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSetObjectPalette.h...
Parsing file /casa/host/build/include/anatomist/commands/cSetObjectPalette.h...
Preprocessing /casa/host/build/include/anatomist/commands/cShowObject.h...
Parsing file /casa/host/build/include/anatomist/commands/cShowObject.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSliceParams.h...
Parsing file /casa/host/build/include/anatomist/commands/cSliceParams.h...
Preprocessing /casa/host/build/include/anatomist/commands/cTexturingParams.h...
Parsing file /casa/host/build/include/anatomist/commands/cTexturingParams.h...
Preprocessing /casa/host/build/include/anatomist/commands/cWindowBlock.h...
Parsing file /casa/host/build/include/anatomist/commands/cWindowBlock.h...
Preprocessing /casa/host/build/include/anatomist/commands/cWindowConfig.h...
Parsing file /casa/host/build/include/anatomist/commands/cWindowConfig.h...
Preprocessing /casa/host/build/include/anatomist/config/anatomist_config.h...
Parsing file /casa/host/build/include/anatomist/config/anatomist_config.h...
Preprocessing /casa/host/build/include/anatomist/control/abstractMenuHandler.h...
Parsing file /casa/host/build/include/anatomist/control/abstractMenuHandler.h...
Preprocessing /casa/host/build/include/anatomist/control/backPixmap_P.h...
Parsing file /casa/host/build/include/anatomist/control/backPixmap_P.h...
Preprocessing /casa/host/build/include/anatomist/control/coloredpixmap.h...
Parsing file /casa/host/build/include/anatomist/control/coloredpixmap.h...
Preprocessing /casa/host/build/include/anatomist/control/controlConfig.h...
Parsing file /casa/host/build/include/anatomist/control/controlConfig.h...
Preprocessing /casa/host/build/include/anatomist/control/controlMenuHandler.h...
Parsing file /casa/host/build/include/anatomist/control/controlMenuHandler.h...
Preprocessing /casa/host/build/include/anatomist/control/graphParams.h...
Parsing file /casa/host/build/include/anatomist/control/graphParams.h...
Preprocessing /casa/host/build/include/anatomist/control/objectDrag.h...
Parsing file /casa/host/build/include/anatomist/control/objectDrag.h...
Preprocessing /casa/host/build/include/anatomist/control/qAbout.h...
Parsing file /casa/host/build/include/anatomist/control/qAbout.h...
Preprocessing /casa/host/build/include/anatomist/control/qImageLabel.h...
Parsing file /casa/host/build/include/anatomist/control/qImageLabel.h...
Preprocessing /casa/host/build/include/anatomist/control/qObjTree.h...
Parsing file /casa/host/build/include/anatomist/control/qObjTree.h...
Preprocessing /casa/host/build/include/anatomist/control/qWinTree.h...
Parsing file /casa/host/build/include/anatomist/control/qWinTree.h...
Preprocessing /casa/host/build/include/anatomist/control/toolTips-qt.h...
Parsing file /casa/host/build/include/anatomist/control/toolTips-qt.h...
Preprocessing /casa/host/build/include/anatomist/control/wcontrolevents.h...
Parswriting output... [ 7%] auto_examples/addMenuEntry
reading sources... [ 50%] python_bv_data_gui
ing file /casa/host/build/include/anatomist/control/wcontrolevents.h...
Preprocessing /casa/host/build/include/anatomist/control/wControl.h...
Parsing file /casa/host/build/include/anatomist/control/wControl.h...
Preprocessing /casa/host/build/include/anatomist/control/winconfigio.h...
Parsing file /casa/host/build/include/anatomist/control/winconfigio.h...
Preprocessing /casa/host/build/include/anatomist/control/wPreferences.h...
Parsing file /casa/host/build/include/anatomist/control/wPreferences.h...
Preprocessing /casa/host/build/include/anatomist/control/whatsNew.h...
Parsing file /casa/host/build/include/anatomist/control/whatsNew.h...
Preprocessing /casa/host/build/include/anatomist/controler/action.h...
Parsing file /casa/host/build/include/anatomist/controler/action.h...
Preprocessing /casa/host/build/include/anatomist/controler/control_d.h...
Parsing file /casa/host/build/include/anatomist/controler/control_d.h...
Preprocessing /casa/host/build/include/anatomist/controler/actiondictionary.h...
Parsing file /casa/host/build/include/anatomist/controler/actiondictionary.h...
Preprocessing /casa/host/build/include/anatomist/controler/controldictionary.h...
Parsing file /casa/host/build/include/anatomist/controler/controldictionary.h...
Preprocessing /casa/host/build/include/anatomist/controler/controlgroupdictionary.h...
Parsing file /casa/host/build/include/anatomist/controler/controlgroupdictionary.h...
Preprocessing /casa/host/build/include/anatomist/controler/icondictionary.h...
Parsing file /casa/host/build/include/anatomist/controler/icondictionary.h...
Preprocessing /casa/host/build/include/anatomist/controler/actionpool.h...
Parsing file /casa/host/build/include/anatomist/controler/actionpool.h...
Preprocessing /casa/host/build/include/anatomist/controler/controlmanager.h...
Parsing file /casa/host/build/include/anatomist/controler/controlmanager.h...
Preprocessing /casa/host/build/include/anatomist/controler/control.h...
Parsing file /casa/host/build/include/anatomist/controler/control.h...
Preprocessing /casa/host/build/include/anatomist/controler/controlswitch.h...
Parsing file /casa/host/build/include/anatomist/controler/controlswitch.h...
Preprocessing /casa/host/build/include/anatomist/controler/view.h...
Parsing file /casa/host/build/include/anatomist/controler/view.h...
Preprocessing /casa/host/build/include/anatomist/control/windowdrag.h...
Parsing file /casa/host/build/include/anatomist/control/windowdrag.h...
Preprocessing /casa/host/build/include/anatomist/dialogs/qclickgraphicsview.h...
Parsing file /casa/host/build/include/anatomist/dialogs/qclickgraphicsview.h...
Preprocessing /casa/host/build/include/anatomist/dialogs/qmagnetslider.h...
Parsing file /casa/host/build/include/anatomist/dialogs/qmagnetslider.h...
Preprocessing /casa/host/build/include/anatomist/dialogs/colorDialog.h...
Parsing file /casa/host/build/include/anatomist/dialogs/colorDialog.h...
Preprocessing /casa/host/build/include/anatomist/dialogs/colorWidget.h...
Parsing file /casa/host/build/include/anatomist/dialogs/colorWidget.h...
Preprocessing /casa/host/build/include/anatomist/dialogs/qScopeLineEdit.h...
Parsing file /casa/host/build/include/anatomist/dialogs/qScopeLineEdit.h...
Preprocessing /casa/host/build/include/anatomist/gradientwidget/gradient.h...
Parsing file /casa/host/build/include/anatomist/gradientwidget/gradient.h...
Preprocessing /casa/host/build/include/anatomist/gradientwidget/gradwidget.h...
Parsing file /casa/host/build/include/anatomist/gradientwidget/gradwidget.h...
Preprocessing /casa/host/build/include/anatomist/gradientwidget/spline.h...
Parsing file /casa/host/build/include/anatomist/gradientwidget/spline.h...
Preprocessing /casa/host/build/include/anatomist/hierarchy/hierarchy.h...
Parsing file /casa/host/build/include/anatomist/hierarchy/hierarchy.h...
Preprocessing /casa/host/build/include/anatomist/selection/qwSelAttrib.h...
Parsing file /casa/host/build/include/anatomist/selection/qwSelAttrib.h...
Preprocessing /casa/host/build/include/anatomist/selection/qSelMenu.h...
Parsing file /casa/hostwriting output... [ 9%] auto_examples/aimsvolumetest
/build/include/anatomist/selection/qSelMenu.h...
Preprocessing /casa/host/build/include/anatomist/selection/qSelectFactory.h...
Parsing file /casa/host/build/include/anatomist/selection/qSelectFactory.h...
Preprocessing /casa/host/build/include/anatomist/selection/qSelectWid.h...
Parsing file /casa/host/build/include/anatomist/selection/qSelectWid.h...
Preprocessing /casa/host/build/include/anatomist/selection/wSelChooser.h...
Parsing file /casa/host/build/include/anatomist/selection/wSelChooser.h...
Preprocessing /casa/host/build/include/anatomist/selection/selectFactory.h...
Parsing file /casa/host/build/include/anatomist/selection/selectFactory.h...
Preprocessing /casa/host/build/include/anatomist/selection/selector.h...
Parsing file /casa/host/build/include/anatomist/selection/selector.h...
Preprocessing /casa/host/build/include/anatomist/selection/postSelector.h...
Parsing file /casa/host/build/include/anatomist/selection/postSelector.h...
Preprocessing /casa/host/build/include/anatomist/misc/error.h...
Parsing file /casa/host/build/include/anatomist/misc/error.h...
Preprocessing /casa/host/build/include/anatomist/observer/Observer.h...
Parsing file /casa/host/build/include/anatomist/observer/Observer.h...
Preprocessing /casa/host/build/include/anatomist/observer/Observable.h...
Parsing file /casa/host/build/include/anatomist/observer/Observable.h...
Preprocessing /casa/host/build/include/anatomist/observer/observcreat.h...
Parsing file /casa/host/build/include/anatomist/observer/observcreat.h...
Preprocessing /casa/host/build/include/anatomist/reference/Transformation.h...
Parsing file /casa/host/build/include/anatomist/reference/Transformation.h...
Preprocessing /casa/host/build/include/anatomist/reference/Referential.h...
Parsing file /casa/host/build/include/anatomist/reference/Referential.h...
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Parsing file /casa/host/build/include/anatomist/reference/Geometry.h...
Preprocessing /casa/host/build/include/anatomist/reference/refobserver.h...
Parsing file /casa/host/build/include/anatomist/reference/refobserver.h...
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Parsing file /casa/host/build/include/anatomist/reference/refpixmap.h...
Preprocessing /casa/host/build/include/anatomist/reference/transformobserver.h...
Parsing file /casa/host/build/include/anatomist/reference/transformobserver.h...
Preprocessing /casa/host/build/include/anatomist/reference/transfSet.h...
Parsing file /casa/host/build/include/anatomist/reference/transfSet.h...
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Parsing file /casa/host/build/include/anatomist/reference/wReferential.h...
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Parsing file /casa/host/build/include/anatomist/reference/wReferential_3d.h...
Preprocessing /casa/host/build/include/anatomist/reference/wChooseReferential.h...
Parsing file /casa/host/build/include/anatomist/reference/wChooseReferential.h...
Preprocessing /casa/host/build/include/anatomist/surface/cutmesh.h...
Parsing file /casa/host/build/include/anatomist/surface/cutmesh.h...
Preprocessing /casa/host/build/include/anatomist/surface/fusion2Dmesh.h...
Parsing file /casa/host/build/include/anatomist/surface/fusion2Dmesh.h...
Preprocessing /casa/host/build/include/anatomist/surface/fusiontexsurf.h...
Parsing file /casa/host/build/include/anatomist/surface/fusiontexsurf.h...
Preprocessing /casa/host/build/include/anatomist/surface/glcomponent.h...
Parsing file /casa/host/build/include/anatomist/surface/glcomponent.h...
Preprocessing /casa/host/build/include/anatomist/surface/glcomponent_internals.h...
Parsing file /casa/host/build/include/anatomist/surface/glcomponent_internals.h...
Preprocessing /casa/host/build/include/anatomist/surface/globject.h...
Parsing file /casa/host/build/include/anatomist/surface/globject.h...
Preprocessing /casa/host/build/include/anatomist/surface/mtexture.h...
Parsing file /casa/host/build/include/anatomist/surface/mtexture.h...
Preprocessing /casa/host/build/include/anatomist/surface/planarfusion3d.h...
Parsing file /casa/host/build/include/anatomist/surface/planarfusion3d.h...
Preprocessing /casa/host/build/include/anatomist/surface/surface.h...
Parsing file /casa/host/build/include/anatomist/surface/surface.h...
Preprocessing /casa/host/build/include/anatomist/surface/surface_d.h...
Parsing file /casa/host/build/include/anatomist/surface/surface_d.h...
Preprocessing /casa/host/build/include/anatomist/surface/tesselatedmesh.h...
Parsing file /casa/host/build/include/anatomist/surface/tesselatedmesh.h...
Preprocessing /casa/host/build/include/anatomist/surface/texsurface.h...
Parsing file /casa/host/build/include/anatomist/surface/texsurface.h...
Preprocessing /casa/host/build/include/anatomist/surface/textobject.h...
Parsing file /casa/host/build/include/anatomist/surface/textobject.h...
Preprocessing /casa/host/build/include/anatomist/surface/texture.h...
Parsing file /casa/host/build/include/anatomist/surface/texture.h...
Preprocessing /casa/host/build/include/anatomist/surface/transformedobject.h...
Parsing file /casa/host/build/include/anatomist/surface/transformedobject.h...
Preprocessing /casa/host/build/include/anatomist/surface/triangulated.h...
Parsing file /casa/host/build/include/anatomist/surface/triangulated.h...
Preprocessing /casa/host/build/include/anatomist/surface/Shader.h...
Parsing file /casa/host/build/include/anatomist/surface/Shader.h...
Preprocessing /casa/host/build/include/anatomist/surface/shownormals.h...
Parsing file /casa/host/build/include/anatomist/surface/shownormals.h...
Preprocessing /casa/host/build/include/anatomist/surface/shownormalsgui.h...
Parsing file /casa/host/build/include/anatomist/surface/shownormalsgui.h...
Preprocessing /casa/host/build/include/anatomist/surface/vectorfield.h...
Parsing file /casa/host/build/include/anatomist/surface/vectorfield.h...
Preprocessing /casa/host/build/include/anatomist/surface/wvectorfield.h...
Parsing file /casa/host/build/include/anatomist/surface/wvectorfield.h...
Preprocessing /casa/host/build/include/anatomist/graph/AGraphIterator.h...
Parsing file /casa/host/build/include/anatomist/graph/AGraphIterator.h...
Preprocessing /casa/host/build/include/anatomist/graph/attribAObject.h...
Parsing file /casa/host/build/include/anatomist/graph/attribAObject.h...
Preprocessing /casa/host/build/include/anatomist/graph/pythonAObject.h...
Parsing file /casa/host/build/include/anatomist/graph/pythonAObject.h...
Preprocessing /casa/host/build/include/anatomist/graph/qgraphproperties.h...
Parsing file /casa/host/build/include/anatomist/graph/qgraphproperties.h...
Preprocessing /casa/host/build/include/anatomist/graph/GraphObject.h...
Parsing file /casa/host/build/include/anatomist/graph/GraphObject.h...
Preprocessing /casa/host/build/include/anatomist/graph/Graph.h...
Parsing file /casa/host/build/include/anatomist/graph/Graph.h...
Preprocessing /casa/host/build/include/anatomist/object/actions.h...
Parsing file /casa/host/build/include/anatomist/object/actions.h...
Preprocessing /casa/host/build/include/anatomist/object/clippedobject.h...
Parsing file /casa/host/build/include/anatomist/object/clippedobject.h...
Preprocessing /casa/host/build/include/anatomist/object/loadevent.h...
Parsing file /casa/host/build/include/anatomist/object/loadevent.h...
Preprocessing /casa/host/build/include/anatomist/object/mobjectio.h...
Parsing file /casa/host/build/include/anatomist/object/mobjectio.h...
Preprocessing /casa/host/build/include/anatomist/object/objectmenuCallbacks.h...
Parsing file /casa/host/build/include/anatomist/object/objectmenuCallbacks.h...
Preprocessing /casa/host/build/include/anatomist/object/objectmenu.h...
Parsing file /casa/host/build/include/anatomist/object/objectmenu.h...
Preprocessing /casa/host/build/include/anatomist/object/objectparamselect.h...
Parsing file /casa/host/build/include/anatomist/object/objectparamselect.h...
Preprocessing /casa/host/build/include/anatomist/object/objectutils.h...
Parsing file /casa/host/build/include/anatomist/object/objectuwriting output... [ 11%] auto_examples/anaevensimplerviewer
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/utility/dynamic.h:95: warning: Found unknown command '\function'
/casa/host/build/include/aims/utility/dynamic.h:41: warning: Found unknown command '\function'
tils.h...
Preprocessing /casa/host/build/include/anatomist/object/objectutils_d.h...
Parsing file /casa/host/build/include/anatomist/object/objectutils_d.h...
Preprocessing /casa/host/build/include/anatomist/object/optionMatcher.h...
Parsing file /casa/host/build/include/anatomist/object/optionMatcher.h...
Preprocessing /casa/host/build/include/anatomist/object/oReader.h...
Parsing file /casa/host/build/include/anatomist/object/oReader.h...
Preprocessing /casa/host/build/include/anatomist/object/Object.h...
Parsing file /casa/host/build/include/anatomist/object/Object.h...
Preprocessing /casa/host/build/include/anatomist/object/objectConverter.h...
Parsing file /casa/host/build/include/anatomist/object/objectConverter.h...
Preprocessing /casa/host/build/include/anatomist/object/qtextureparams.h...
Parsing file /casa/host/build/include/anatomist/object/qtextureparams.h...
Preprocessing /casa/host/build/include/anatomist/object/selfsliceable.h...
Parsing file /casa/host/build/include/anatomist/object/selfsliceable.h...
Preprocessing /casa/host/build/include/anatomist/object/sliceable.h...
Parsing file /casa/host/build/include/anatomist/object/sliceable.h...
Preprocessing /casa/host/build/include/anatomist/object/texturepanel.h...
Parsing file /casa/host/build/include/anatomist/object/texturepanel.h...
Preprocessing /casa/host/build/include/anatomist/object/texturewin.h...
Parsing file /casa/host/build/include/anatomist/object/texturewin.h...
Preprocessing /casa/host/build/include/anatomist/window/colorstyle.h...
Parsing file /casa/host/build/include/anatomist/window/colorstyle.h...
Preprocessing /casa/host/build/include/anatomist/window/controlledWindow.h...
Parsing file /casa/host/build/include/anatomist/window/controlledWindow.h...
Preprocessing /casa/host/build/include/anatomist/window/glcaps.h...
Parsing file /casa/host/build/include/anatomist/window/glcaps.h...
Preprocessing /casa/host/build/include/anatomist/window/glcontext.h...
Parsing file /casa/host/build/include/anatomist/window/glcontext.h...
Preprocessing /casa/host/build/include/anatomist/window/glwidget.h...
Parsing file /casa/host/build/include/anatomist/window/glwidget.h...
Preprocessing /casa/host/build/include/anatomist/window/glwidgetmanager.h...
Parsing file /casa/host/build/include/anatomist/window/glwidgetmanager.h...
Preprocessing /casa/host/build/include/anatomist/window/qwinblock.h...
Parsing file /casa/host/build/include/anatomist/window/qwinblock.h...
Preprocessing /casa/host/build/include/anatomist/window/qwindow.h...
Parsing file /casa/host/build/include/anatomist/window/qwindow.h...
Preprocessing /casa/host/build/include/anatomist/window/qWinFactory.h...
Parsing file /casa/host/build/include/anatomist/window/qWinFactory.h...
Preprocessing /casa/host/build/include/anatomist/window/viewstate.h...
Parsing file /casa/host/build/include/anatomist/window/viewstate.h...
Preprocessing /casa/host/build/include/anatomist/window/winFactory.h...
Parsing file /casa/host/build/include/anatomist/window/winFactory.h...
Preprocessing /casa/host/build/include/anatomist/window/Window.h...
Parsing file /casa/host/build/include/anatomist/window/Window.h...
Preprocessing /casa/host/build/include/anatomist/window3D/agraphicsview_p.h...
Parsing file /casa/host/build/include/anatomist/window3D/agraphicsview_p.h...
Preprocessing /casa/host/build/include/anatomist/window3D/annotedgraph.h...
Parsing file /casa/host/build/include/anatomist/window3D/annotedgraph.h...
Preprocessing /casa/host/build/include/anatomist/window3D/boxviewslice.h...
Parsing file /casa/host/build/include/anatomist/window3D/boxviewslice.h...
Preprocessing /casa/host/build/include/anatomist/window3D/connmatrixcontrol.h...
Parsing file /casa/host/build/include/anatomist/window3D/connmatrixcontrol.h...
Preprocessing /casa/host/build/include/anatomist/window3D/orientationAnnotation.h...
Parsing file /casa/host/build/include/anatomist/window3D/orientationAnnotation.h...
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Parsing file /casa/host/build/include/anatomist/processor/contereading sources... [ 90%] api/utils
file /casa/host/build/include/aims/topology/connectivity26.h...
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Building macro definition list...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Computing nesting relations for classes...
Associating documentation with classes...
Building example list...
Searching for enumerations...
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Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
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Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
Generating style sheet...
Generating search indices...
Generating images for formulas in HTML...
Generating example documentation...
Generating file sources...
Generating code for file aims/algorithm/imagxt.h...
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hader.h...
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Parsing file /casa/host/build/include/anatomist/commands/cCreateGraph.h...
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Parsing file /casa/host/build/include/anatomist/commands/cGetConnThres.h...
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Parsing file /casa/host/build/include/anatomist/commands/cAddNode.h...
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Preprocessing /casa/host/build/include/anatomist/action/dynsegmentaction.h...
Parsing file /casa/host/build/include/anatomiswriting output... [ 16%] auto_examples/anatomistapiTests
/casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag:1: warning: Internal inconsistency: scope for class carto::conversion::Helper::yes not found!
writing output... [ 19%] auto_examples/bvProcessSocket
ealgorithm.h...
Generating code for file aims/classification/classifstrategy.h...
Generating code for file aims/classification/classifstrategy_d.h...
Generating code for file aims/classification/distance.h...
Generating code for file aims/classification/distance_d.h...
Generating code for file aims/classification/dynamicstrategy.h...
Generating code for file aims/classification/dynamicstrategy_d.h...
Generating code for file aims/classification/individuals.h...
Generating code for file aims/classification/individuals_d.h...
Generating code for file aims/classification/iterativeclassification.h...
Generating code for file aims/classification/iterativeclassification_d.h...
Generating code for file aims/classification/kmeansstrategy.h...
Generating code for file aims/classification/kmeansstrategy_d.h...
Generating code for file aims/classification/mixtureOfPpca.h...
Generating code for file aims/classification/mixtureOfPpca_d.h...
Generating code for file aims/classification/pcastrategy.h...
Generating code for file aims/classification/pcastrategy_d.h...
Generating code for file aims/classification/softDecSimilarityCompAnalysis.h...
Generating code for file aims/compression/compression_g.h...
Generating code for file aims/compression/huffman.h...
Generating code for file aims/compression/lz.h...
Generating code for file aims/compression/lzhl.h...
Generating code for file aims/config/aimsalgo_config.h...
Generating code for file aims/connectivity/meshcc.h...
Generating code for file aims/connectivity/meshcc_d.h...
Generating code for file aims/distancemap/advection.h...
Generating code for file aims/distancemap/chamfer.h...
Generating code for file aims/distancemap/danielsson.h...
Generating code for file aims/distancemap/distancemap_g.h...
Generating code for file aims/distancemap/downpath.h...
Generating code for file aims/distancemap/fastmarching.h...
Generating code for file aims/distancemap/front.h...
Generating code for file aims/distancemap/mask.h...
Generating code for file aims/distancemap/meshdistance.h...
Generating code for file aims/distancemap/meshdistance_d.h...
Generating code for file aims/distancemap/meshmorphomat.h...
Generating code for file aims/distancemap/meshmorphomat_d.h...
Generating code for file aims/distancemap/meshparcellation.h...
Generating code for file aims/distancemap/meshparcellation_d.h...
Generating code for file aims/distancemap/meshvoronoi.h...
Generating code for file aims/distancemap/meshvoronoi_d.h...
Generating code for file aims/distancemap/projection.h...
Generating code for file aims/distancemap/stlsort.h...
Generating code for file aims/distancemap/thickness.h...
Generating code for file aims/distancemap/voronoi.h...
Generating code for file aims/estimation/estimation_g.h...
Generating code for file aims/estimation/gmlfunc.h...
Generating code for file aims/estimation/lms-estimator.h...
Generating code for file aims/estimation/m-estimator.h...
Generating code for file aims/estimation/m-func.h...
Generating code for file aims/estimation/medfunc.h...
Generating code for file aims/pyramid/medfunc.h...
Generating code for file aims/estimation/msfunc.h...
Generating code for file aims/estimation/wlms-estimator.h...
Generating code for file aims/fastComputation/tabulation.h...
Generating code for file aims/ffd/tabulSpline.h...
Generating code for file aims/fibers/fiberDistance.h...
Generating code for file aims/foldgraph/foldgraphattributes.h...
Generating code for file aims/foldgraph/foldoversegmentation.h...
Generating code for file aims/geodesicpath/geodesic_algorithm_base.h...
Generating code for file aims/geodesicpath/geodesic_algorithm_dijkstra.h...
Generating code for file aims/geodesicpath/geodesic_algorithm_dijkstra_alternative.h...
Generating code for file aims/geodesicpath/geodesic_algorithm_exact.h...
Generating code for file aims/geodesicpath/geodesic_algorithm_exact_elements.h...
Generating code for file aims/geodesicpath/geodesic_algorithm_graph_base.h...
Generating code for file aims/geodesicpath/geodesic_algorithm_subdivision.h...
Generating code for file aims/geodeswriting output... [ 21%] auto_examples/control
writing output... [ 23%] auto_examples/customcommands
writing output... [ 26%] auto_examples/customopenglobject
writing output... [ 28%] auto_examples/ellipsoid
writing output... [ 30%] auto_examples/events
writing output... [ 33%] auto_examples/fusion
icpath/geodesic_constants_and_simple_functions.h...
Generating code for file aims/geodesicpath/geodesic_memory.h...
Generating code for file aims/geodesicpath/geodesic_mesh.h...
Generating code for file aims/geodesicpath/geodesic_mesh_elements.h...
Generating code for file aims/geodesicpath/geodesicPath.h...
Generating code for file aims/histogram/cumulated.h...
Generating code for file aims/histogram/equalizedHisto.h...
Generating code for file aims/histogram/histogram.h...
Generating code for file aims/histogram/histogram_g.h...
Generating code for file aims/histogram/regularBinnedHisto.h...
Generating code for file aims/histogram/simpleHisto.h...
Generating code for file aims/information/information.h...
Generating code for file aims/information/pdf.h...
Generating code for file aims/interpolation/interpolatedvolume.h...
Generating code for file aims/interpolation/interpolatedvolume_d.h...
Generating code for file aims/io/roigtmR.h...
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Generating code for file aims/io/roiselectorR.h...
Generating code for file aims/math/balanc.h...
Generating code for file aims/math/balbak.h...
Generating code for file aims/math/bessel.h...
Generating code for file aims/math/bspline.h...
Generating code for file aims/math/bspline2.h...
Generating code for file aims/math/bspline3.h...
Generating code for file aims/math/curv2Diso.h...
Generating code for file aims/math/curv3Diso.h...
Generating code for file aims/math/discriminantanalysis.h...
Generating code for file aims/math/discriminantanalysis_d.h...
Generating code for file aims/math/distspheric.h...
Generating code for file aims/math/eigen.h...
Generating code for file aims/math/elmhes.h...
Generating code for file aims/math/eltran.h...
Generating code for file aims/math/gaussj.h...
Generating code for file aims/math/geometry.h...
Generating code for file aims/math/gradient.h...
Generating code for file aims/math/harris.h...
Generating code for file aims/math/householder.h...
Generating code for file aims/math/hqr.h...
Generating code for file aims/math/hypergeometric.h...
Generating code for file aims/math/knn.h...
Generating code for file aims/math/math_g.h...
Generating code for file aims/math/multilinfit.h...
Generating code for file aims/math/pca.h...
Generating code for file aims/math/pca_d.h...
Generating code for file aims/math/ppca.h...
Generating code for file aims/math/ppca_d.h...
Generating code for file aims/math/random.h...
Generating code for file aims/math/sobel.h...
Generating code for file aims/math/svd.h...
Generating code for file aims/math/tensorMatrix.h...
Generating code for file aims/math/tqli.h...
Generating code for file aims/mesh/curv.h...
Generating code for file aims/mesh/facet.h...
Generating code for file aims/mesh/geometric.h...
Generating code for file aims/mesh/inflate.h...
Generating code for file aims/mesh/mesh_g.h...
Generating code for file aims/mesh/mesh_graph.h...
Generating code for file aims/mesh/mesh_graph_d.h...
Generating code for file aims/mesh/mesher.h...
Generating code for file aims/mesh/meshinterpoler.h...
Generating code for file aims/mesh/meshinterpoler_d.h...
Generating code for file aims/mesh/meshinterpoler_p.h...
Generating code for file aims/mesh/meshwatershed.h...
Generating code for file aims/moment/geomMoment.h...
Generating code for file aims/moment/momBase.h...
Generating code for file aims/moment/moment.h...
Generating code for file aims/moment/moment_g.h...
Generating code for file aims/moment/momFactory.h...
Generating code for file aims/moment/momIncStgy.h...
Generating code for file aims/moment/momInvariant.h...
Generating code for file aims/moment/momNormStgy.h...
Generating code for file aims/moment/momStgy.h...
Generating code for file aims/moment/momSurfStgy.h...
Generating code for file aims/moment/momTriFactory.h...
Generating code for file aims/moment/momTriStgy.h...
Generating code for file aims/moment/momVolStgy.h...
Generating code for file aims/moment/triMoment.h...
Generating code for file aims/morphology/morphogreylevel_d.h...
Generating code for file aims/mwriting output... [ 35%] auto_examples/fusion3D
writing output... [ 38%] auto_examples/graph
writing output... [ 40%] auto_examples/graph_building
[ 91%] Generating AimsAverage help file ...
writing output... [ 42%] auto_examples/index
writing output... [ 45%] auto_examples/meshtest
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_iterator::const_iterator()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_iterator::const_iterator(carto::VolumeRef< T > vol, int y, int z, int t)
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_iterator::const_iterator(iterator other)
<unknown>:1: warning: no uniquely matching class member found for
const std::pair< Point4d, const_LowLevelStorage > & aims::SparseVolume< carto::Volume< T > >::const_iterator::operator*() const
<unknown>:1: warning: no uniquely matching class member found for
const std::pair< Point4d, const_LowLevelStorage > * aims::SparseVolume< carto::Volume< T > >::const_iterator::operator->() const
<unknown>:1: warning: documented symbol 'const const_LowLevelStorage & aims::SparseVolume< carto::Volume< T > >::const_iterator::storage' was not declared or defined.
<unknown>:1: warning: no uniquely matching class member found for
bool aims::SparseVolume< carto::Volume< T > >::const_iterator::operator==(const const_iterator &x) const
<unknown>:1: warning: no uniquely matching class member found for
bool aims::SparseVolume< carto::Volume< T > >::const_iterator::operator!=(const const_iterator &x) const
<unknown>:1: warning: no uniquely matching class member found for
const_iterator & aims::SparseVolume< carto::Volume< T > >::const_iterator::operator++()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::const_LowLevelStorage()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::const_LowLevelStorage(const carto::VolumeRef< T > vol, int y, int z, int t)
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::const_LowLevelStorage(const LowLevelStorage &other)
<unknown>:1: warning: no uniquely matching class member found for
const_iterator aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::begin() const
<unknown>:1: warning: no uniquely matching class member found for
const_iterator aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::end() const
<unknown>:1: warning: no uniquely matching class member found for
carto::VolumeRef< T > aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::volume() const
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::iterator::iterator()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::iterator::iterator(carto::VolumeRef< T > vol, int y, int z, int t)
<unknown>:1: warning: no uniquely matching class member found for
std::pair< Point4d, LowLevelStorage > & aims::SparseVolume< carto::Volume< T > >::iterator::operator*()
<unknown>:1: warning: no uniquely matching class member found for
std::pair< Point4d, LowLevelStorage > * aims::SparseVolume< carto::Volume< T > >::iterator::operator->()
<unknown>:1: warning: documented symbol 'LowLevelStorage & aims::SparseVolume< carto::Volume< T > >::iterator::storage' was not declared or defined.
<unknown>:1: warning: no uniquely matching class member found for
bool aims::SparseVolume< carto::Volume< T > >::iterator::operator==(const iterator &x) const
<unknown>:1: warning: no uniquely matching class member found for
bool aims::SparseVolume< carto::Volume< T > >::iterator::operator!=(const iterator &x) const
<unknown>:1: warning: no uniquely matching class member found for
iterator & aims::SparseVolume< carto::Volume< T > >::iterator::operator++()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::LowLevelStorage()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::LowLevelStorage(carto::VolumeRef< T > vol, int y, int z, int t)
<unknown>:1: warning: no uniquely matching class member found for
iterator aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::begin()
<unknown>:1: warning: no uniquely matching class member found for
const_iterator aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::begin() const
<unknown>:1: warning: no uniquely matching class member found for
iterator aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::end()
<unknown>:1: warning: no uniquely matching class member found for
const_iterator aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::end() const
<unknown>:1: warning: no uniquely matching class member found for
carto::VolumeRef< T > aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::volume() const
writing output... [ 47%] auto_examples/nomenclatureselection
/casa/host/build/include/anatomist/graph/AGraphIterator.h:109: warning: no matching class member found for
anatomist::AGraphIterator::AGraphIterator(const AGraphIterator::datatype::iterator &thing)
Possible candidates:
'anatomist::AGraphIterator::AGraphIterator(const datatype::iterator &thing)'
'anatomist::AGraphIterator::AGraphIterator(const AGraphIterator &other)'
/casa/host/build/include/anatomist/graph/AGraphIterator.h:181: warning: no matching class member found for
anatomist::const_AGraphIterator::const_AGraphIterator(const const_AGraphIterator::datatype::const_iterator &thing)
Possible candidates:
'anatomist::const_AGraphIterator::const_AGraphIterator(const datatype::const_iterator &thing)'
'anatomist::const_AGraphIterator::const_AGraphIterator(const const_AGraphIterator &other)'
orphology/morphology_g.h...
Generating code for file aims/morphology/operatormorpho.h...
Generating code for file aims/mpi/types.h...
Generating code for file aims/signalfilter/types.h...
Generating code for file aims/optimization/covsrt.h...
Generating code for file aims/optimization/deterministic.h...
Generating code for file aims/optimization/levmrq.h...
Generating code for file aims/optimization/lm2gauss.h...
Generating code for file aims/optimization/lmfunc.h...
Generating code for file aims/optimization/lmgamma.h...
Generating code for file aims/optimization/lmgauss.h...
Generating code for file aims/optimization/objective.h...
Generating code for file aims/optimization/optimization_g.h...
Generating code for file aims/optimization/optimizer.h...
Generating code for file aims/optimization/powell.h...
Generating code for file aims/optimization/singleoptimizer.h...
Generating code for file aims/points_distribution/points_distribution.h...
Generating code for file aims/primalsketch/coupledDiffusion2DSmoother.h...
Generating code for file aims/primalsketch/coupledDiffusion2DSmoother_d.h...
Generating code for file aims/primalsketch/coupledSmoother.h...
Generating code for file aims/primalsketch/dericheSmoother.h...
Generating code for file aims/primalsketch/dericheSmoother_d.h...
Generating code for file aims/primalsketch/finiteElementSmoother.h...
Generating code for file aims/primalsketch/finiteElementSmoother_d.h...
Generating code for file aims/primalsketch/greyLevelBlob.h...
Generating code for file aims/primalsketch/imageCoupledSmoother.h...
Generating code for file aims/primalsketch/imageSmoother.h...
Generating code for file aims/primalsketch/peronaMalikSmoother.h...
Generating code for file aims/primalsketch/peronaMalikSmoother_d.h...
Generating code for file aims/primalsketch/primalSketch.h...
Generating code for file aims/primalsketch/primalSketch2graph.h...
Generating code for file aims/primalsketch/primalSketchUtil.h...
Generating code for file aims/primalsketch/scaleLevel.h...
Generating code for file aims/primalsketch/scalespace.h...
Generating code for file aims/primalsketch/scaleSpaceBlob.h...
Generating code for file aims/primalsketch/smoother.h...
Generating code for file aims/primalsketch/surfaceSmoother.h...
Generating code for file aims/pyramid/convolutionsubsampler.h...
Generating code for file aims/pyramid/convolutionsubsampler_d.h...
Generating code for file aims/pyramid/maxfunc.h...
Generating code for file aims/pyramid/meanfunc.h...
Generating code for file aims/pyramid/movingaveragesubsampler.h...
Generating code for file aims/pyramid/pyr-func.h...
Generating code for file aims/pyramid/pyramid.h...
Generating code for file aims/pyramid/pyramid_g.h...
Generating code for file aims/pyramid/splinepyramid.h...
Generating code for file aims/pyramid/splinepyramid_d.h...
Generating code for file aims/pyramid/splinesubsampler.h...
Generating code for file aims/pyramid/splinesubsampler_d.h...
Generating code for file aims/pyramid/subsamplingpyramid.h...
Generating code for file aims/pyramid/subsamplingpyramid_d.h...
Generating code for file aims/registration/block_matching.h...
Generating code for file aims/registration/block_matching_d.h...
Generating code for file aims/registration/displacement_field.h...
Generating code for file aims/registration/displacement_field_d.h...
Generating code for file aims/registration/ffd.h...
Generating code for file aims/registration/minimisation.h...
Generating code for file aims/registration/minimisation_d.h...
Generating code for file aims/registration/scale_control.h...
Generating code for file aims/registration/scale_control_d.h...
Generating code for file aims/registration/transformation.h...
Generating code for file aims/registration/transformation_d.h...
Generating code for file aims/resampling/bucketmapsampler.h...
Generating code for file aims/resampling/cubicresampler.h...
Generating code for file aims/resampling/cubicresampler_d.h...
Generating code for file aims/resampling/extremadifferencesubsampling.h...
Generating code for file aims/resampling/generawriting output... [ 50%] auto_examples/selection
writing output... [ 52%] auto_examples/sg_execution_times
writing output... [ 54%] auto_examples/sphere
writing output... [ 57%] auto_examples/texturedrawing
lsampler.h...
Generating code for file aims/resampling/harmonicCageResampler.h...
Generating code for file aims/resampling/linearresampler.h...
Generating code for file aims/resampling/linearresampler_d.h...
Generating code for file aims/resampling/majoritylabelresampler.h...
Generating code for file aims/resampling/majoritylabelresampler_d.h...
Generating code for file aims/resampling/majoritysubsampling.h...
Generating code for file aims/resampling/masklinresampler.h...
Generating code for file aims/resampling/masklinresampler_d.h...
Generating code for file aims/resampling/maxsubsampling.h...
Generating code for file aims/resampling/meansubsampling.h...
Generating code for file aims/resampling/medianresampler.h...
Generating code for file aims/resampling/medianresampler_d.h...
Generating code for file aims/resampling/mediansubsampling.h...
Generating code for file aims/resampling/meshToVoxelsResampler.h...
Generating code for file aims/resampling/meshToVoxelsResampler_d.h...
Generating code for file aims/resampling/minsubsampling.h...
Generating code for file aims/resampling/nearestneighborresampler.h...
Generating code for file aims/resampling/nearestneighborresampler_d.h...
Generating code for file aims/resampling/notnullmeansubsampling.h...
Generating code for file aims/resampling/notnullmediansubsampling.h...
Generating code for file aims/resampling/polynomial.h...
Generating code for file aims/resampling/quadraticresampler.h...
Generating code for file aims/resampling/quadraticresampler_d.h...
Generating code for file aims/resampling/quarticresampler.h...
Generating code for file aims/resampling/quarticresampler_d.h...
Generating code for file aims/resampling/quinticresampler.h...
Generating code for file aims/resampling/quinticresampler_d.h...
Generating code for file aims/resampling/resampler.h...
Generating code for file aims/resampling/resampler_d.h...
Generating code for file aims/resampling/resamplerfactory.h...
Generating code for file aims/resampling/resamplerfactory_d.h...
Generating code for file aims/resampling/resampling_g.h...
Generating code for file aims/resampling/samplable.h...
Generating code for file aims/resampling/samplable_cone.h...
Generating code for file aims/resampling/samplable_sphere.h...
Generating code for file aims/resampling/sampler.h...
Generating code for file aims/resampling/seventhorderresampler.h...
Generating code for file aims/resampling/seventhorderresampler_d.h...
Generating code for file aims/resampling/sixthorderresampler.h...
Generating code for file aims/resampling/sixthorderresampler_d.h...
Generating code for file aims/resampling/splineresampler.h...
Generating code for file aims/resampling/splineresampler_d.h...
Generating code for file aims/resampling/subsamplingimagealgorithm.h...
Generating code for file aims/resampling/sumsubsampling.h...
Generating code for file aims/roi/clusterArg.h...
Generating code for file aims/roi/clusterArg_d.h...
Generating code for file aims/roi/roigtm.h...
Generating code for file aims/roi/roiselector.h...
Generating code for file aims/roi/roistat.h...
Generating code for file aims/scalespace/bucketblob.h...
Generating code for file aims/scalespace/bucketblob_d.h...
Generating code for file aims/scalespace/meshBlob.h...
Generating code for file aims/scalespace/meshDiffuse.h...
Generating code for file aims/signalfilter/convol.h...
Generating code for file aims/signalfilter/convolutionfilter.h...
Generating code for file aims/signalfilter/convolutionfilter_d.h...
Generating code for file aims/signalfilter/differencefilter.h...
Generating code for file aims/signalfilter/diffusionSmoother.h...
Generating code for file aims/signalfilter/diffusionSmoother_d.h...
Generating code for file aims/signalfilter/elementfilterfactory.h...
Generating code for file aims/signalfilter/elementfilterfactory_d.h...
Generating code for file aims/signalfilter/filteringfunction.h...
Generating code for file aims/signalfilter/filteringfunction_element.h...
Generating code for file aims/signalfilter/filteringfunction_element_d.h...
Generating code for file aim[ 91%] Generating AimsChannelExtract help file ...
writing output... [ 59%] auto_examples/volumeMeasures
writing output... [ 61%] auto_examples/volumetest
s/signalfilter/filteringfunction_element_rgb.h...
Generating code for file aims/signalfilter/filteringfunction_element_rgb_d.h...
Generating code for file aims/signalfilter/filteringfunction_linear.h...
Generating code for file aims/signalfilter/filteringfunction_linear_d.h...
Generating code for file aims/signalfilter/filteringfunction_linear_rgb.h...
Generating code for file aims/signalfilter/filteringfunction_linear_rgb_d.h...
Generating code for file aims/signalfilter/filteringimagealgorithm.h...
Generating code for file aims/signalfilter/firfilter.h...
Generating code for file aims/signalfilter/g2dsmooth.h...
Generating code for file aims/signalfilter/g3dsmooth.h...
Generating code for file aims/signalfilter/gaborfilter.h...
Generating code for file aims/signalfilter/gcoef.h...
Generating code for file aims/signalfilter/gcolumns.h...
Generating code for file aims/signalfilter/gframes.h...
Generating code for file aims/signalfilter/ggradient.h...
Generating code for file aims/signalfilter/ghessian.h...
Generating code for file aims/signalfilter/gjacobian.h...
Generating code for file aims/signalfilter/glines.h...
Generating code for file aims/signalfilter/grecurse.h...
Generating code for file aims/signalfilter/gslices.h...
Generating code for file aims/signalfilter/iirfilter.h...
Generating code for file aims/signalfilter/linearfilterfactory.h...
Generating code for file aims/signalfilter/linearfilterfactory_d.h...
Generating code for file aims/signalfilter/majorityfilter.h...
Generating code for file aims/signalfilter/maxfilter.h...
Generating code for file aims/signalfilter/meanfilter.h...
Generating code for file aims/signalfilter/medianfilter.h...
Generating code for file aims/signalfilter/minfilter.h...
Generating code for file aims/signalfilter/movingaveragefilter.h...
Generating code for file aims/signalfilter/parity.h...
Generating code for file aims/signalfilter/sdfilter.h...
Generating code for file aims/signalfilter/signalfilter_g.h...
Generating code for file aims/signalfilter/splinefilter.h...
Generating code for file aims/signalfilter/splinefilter_d.h...
Generating code for file aims/signalfilter/sumfilter.h...
Generating code for file aims/signalfilter/variancefilter.h...
Generating code for file aims/signalfilter/vfilter.h...
Generating code for file aims/spam/spam.h...
Generating code for file aims/talairach/cramer.h...
Generating code for file aims/talairach/talACPCNorm.h...
Generating code for file aims/talairach/talairach.h...
Generating code for file aims/talairach/talBoundingBoxPoints.h...
Generating code for file aims/talairach/talBox.h...
Generating code for file aims/talairach/talBoxBase.h...
Generating code for file aims/talairach/talPoints.h...
Generating code for file aims/talairach/talVolume.h...
Generating code for file aims/threshold/emthreshold.h...
Generating code for file aims/topology/adjacency.h...
Generating code for file aims/topology/cc18adjacent.h...
Generating code for file aims/topology/cc26adjacent.h...
Generating code for file aims/topology/cc6adjacent.h...
Generating code for file aims/topology/classifMeaning.h...
Generating code for file aims/topology/components.h...
Generating code for file aims/topology/components18.h...
Generating code for file aims/topology/components26.h...
Generating code for file aims/topology/connectivity18.h...
Generating code for file aims/topology/connectivity26.h...
Generating code for file aims/topology/connectivity6.h...
Generating code for file aims/topology/relation.h...
Generating code for file aims/topology/topoBase.h...
Generating code for file aims/topology/topoClassif.h...
Generating code for file aims/topology/topoClassifBase.h...
Generating code for file aims/topology/topoClassifier.h...
Generating code for file aims/topology/topology.h...
Generating code for file aims/transform/fft1d.h...
Generating code for file aims/transform/hilbert1d.h...
Generating code for file aims/transform/least_square_estimation.h...
Generating code for file aims/transform/rigidestimation.h...
Generating code for file aims/transform/transform_objects.h..writing output... [ 64%] index
warning: Included by graph for 'aimsalgo_config.h' not generated, too many nodes (58), threshold is 50. Consider increasing DOT_GRAPH_MAX_NODES.
.
Generating code for file aims/transform/transform_objects_d.h...
Generating code for file aims/utility/dynamic.h...
Generating code for file aims/utility/dynamic_d.h...
Generating file documentation...
Generating docs for file aims/algorithm/imagealgorithm.h...
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t/action/dynsegmentaction.h...
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Adding members to member groups.
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Generating code for file anatomist/application/filedialogextension.h...
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Generating code for file anatomist/application/hierarchyeditor.h...
Generating code for file anatomist/application/listDir.h...
Generating code for file anatomist/application/localConfig.h...
Generating code for file anatomist/application/module.h...
Generating code for file anatomi.
Generating docs for file aims/transform/hilbert1d.h...
Generating docs for file aims/transform/least_square_estimation.h...
Generating docs for file aims/transform/rigidestimation.h...
Generating docs for file aims/transform/transform_objects.h...
Generating docs for file aims/transform/transform_objects_d.h...
Generating docs for file aims/utility/dynamic.h...
Generating docs for file aims/utility/dynamic_d.h...
Generating page documentation...
Generating group documentation...
Generating class documentation...
Generating docs for compound Adjacency...
Generating docs for compound AimsConvolution...
Generating docs for compound AimsDistmapMask...
Generating docs for compound AimsDistmapMaskPoint...
Generating docs for compound AimsEigen...
Generating docs for compound AimsEMThreshold...
Generating docs for compound AimsFIRFilter...
Generating docs for compound AimsGradient...
Generating docs for compound AimsMaskedConvolution...
Generating docs for compound AimsPCA...
Generating docs for compound AimsSVD...
Generating docs for compound AimsVFilter...
Generating docs for compound BackBalancing...
Generating docs for compound Balancing...
Generating docs for compound BlockMatching...
Generating docs for compound BucketSampler...
Generating docs for compound CC18Adjacent...
Generating docs for compound CC26Adjacent...
Generating docs for compound CC6Adjacent...
Generating docs for compound ChamferMask...
Generating docs for compound Components...
Generating docs for compound Components18Neighborhood...
Generating docs for compound Components26Neighborhood...
Generating docs for compound Connectivity18...
Generating docs for compound Connectivity26...
Generating docs for compound Connectivity6...
Generating docs for compound CovarianceStorage...
Generating docs for compound CramerSolver...
Generating docs for compound CumulatedHistogram...
Generating docs for compound DecompositionTQLI...
Generating docs for compound DetermOptimizer...
Generating docs for compound DisplacementField...
Generating docs for compound Equalizer...
Generating docs for compound ExponentialDeviates...
Generating docs for compound Facet...
Generating docs for compound Gaussian2DSmoothing...
Generating docs for compound Gaussian3DSmoothing...
Generating docs for compound GaussianColumns...
Generating docs for compound GaussianFrames...
Generating docs for compound GaussianGradient...
Generating docs for compound GaussianHessian...
Generating docs for compound GaussianJacobian...
Generating docs for compound GaussianLines...
Generating docs for compound GaussianSlices...
Generating docs for compound GaussJordan...
Generating docs for compound GCoef...
Generating docs for compound GeometricMoment...
Generating docs for compound GMLFunc...
Generating docs for compound HessenbergAccumulation...
Generating docs for compound HessenbergQR...
Generating docs for compound HessenbergReduction...
Generating docs for compound Histogram...
Generating docs for compound HouseholderTridiag...
Generating docs for compound HuffStat...
Generating docs for compound HuffStatTmpStruct...
Generating docs for compound LevenbergMarquardt...
Generating docs for compound LM2Gaussian...
Generating docs for compound LMFunction...
Generating docs for compound LMGamma...
Generating docs for compound LMGaussian...
Generating docs for compound LMSEstimator...
Generating docs for compound LZBuffer...
Generating docs for compound LZHLCompressor...
Generating docs for compound LZHLDecoderStat...
Generating docs for nested compound LZHLDecoderStat::Group...
Generating docs for compound LZHLDecompressor...
Generating docs for compound LZHLEncoder...
Generating docs for compound LZHLEncoderStat...
Generating docs for nested compound LZHLEncoderStat::Symbol...
Generating docs for compound MaxPyramidFunc...
Generating docs for compound MeanPyramidFunc...
Generating docs for compound MedFunc...
Generating docs for compound MedianPyramidFunc...
Generating docs for compound MedianSmoothing...
Generating docs for compound Mesher...
Generating docs for compound MEstimator...
Generating docs fost/application/roialgomodule.h...
Generating code for file anatomist/application/roibasemodule.h...
Generating code for file anatomist/application/settings.h...
Generating code for file anatomist/application/syntax.h...
Generating code for file anatomist/browser/attDescr.h...
Generating code for file anatomist/browser/attributedchooser.h...
Generating code for file anatomist/browser/browsercontrol.h...
Generating code for file anatomist/browser/labeledit.h...
Generating code for file anatomist/browser/qObjBrowserWid.h...
Generating code for file anatomist/browser/qwObjectBrowser.h...
Generating code for file anatomist/browser/stringEdit.h...
Generating code for file anatomist/bucket/Bucket.h...
Generating code for file anatomist/color/colortraits.h...
Generating code for file anatomist/color/Light.h...
Generating code for file anatomist/color/Material.h...
Generating code for file anatomist/color/minipalette.h...
Generating code for file anatomist/color/objectPalette.h...
Generating code for file anatomist/color/palette.h...
Generating code for file anatomist/color/paletteList.h...
Generating code for file anatomist/color/paletteselectwidget.h...
Generating code for file anatomist/color/qwObjPalette.h...
Generating code for file anatomist/color/wMaterial.h...
Generating code for file anatomist/color/wObjPalette.h...
Generating code for file anatomist/color/wRendering.h...
Generating code for file anatomist/commands/cActivateAction.h...
Generating code for file anatomist/commands/cAddNode.h...
Generating code for file anatomist/commands/cAddObject.h...
Generating code for file anatomist/commands/cApplyBuiltinReferential.h...
Generating code for file anatomist/commands/cAskTexExtrema.h...
Generating code for file anatomist/commands/cAssignReferential.h...
Generating code for file anatomist/commands/cCamera.h...
Generating code for file anatomist/commands/cChangePalette.h...
Generating code for file anatomist/commands/cClosePipe.h...
Generating code for file anatomist/commands/cCloseWindow.h...
Generating code for file anatomist/commands/cControlsParams.h...
Generating code for file anatomist/commands/cCreateControlWindow.h...
Generating code for file anatomist/commands/cCreateGraph.h...
Generating code for file anatomist/commands/cCreateWindow.h...
Generating code for file anatomist/commands/cCreateWindowsBlock.h...
Generating code for file anatomist/commands/cDeleteAll.h...
Generating code for file anatomist/commands/cDeleteElement.h...
Generating code for file anatomist/commands/cDeleteObject.h...
Generating code for file anatomist/commands/cDuplicateObject.h...
Generating code for file anatomist/commands/cEventFilter.h...
Generating code for file anatomist/commands/cExit.h...
Generating code for file anatomist/commands/cExportTexture.h...
Generating code for file anatomist/commands/cExternalReference.h...
Generating code for file anatomist/commands/cExtractTexture.h...
Generating code for file anatomist/commands/cFusion2DParams.h...
Generating code for file anatomist/commands/cFusion3DParams.h...
Generating code for file anatomist/commands/cFusionInfo.h...
Generating code for file anatomist/commands/cFusionObjects.h...
Generating code for file anatomist/commands/cGenerateTexture.h...
Generating code for file anatomist/commands/cGetConnThres.h...
Generating code for file anatomist/commands/cGetInfo.h...
Generating code for file anatomist/commands/cGraphDisplayProperties.h...
Generating code for file anatomist/commands/cGraphParams.h...
Generating code for file anatomist/commands/cGroupObjects.h...
Generating code for file anatomist/commands/cLinkedCursor.h...
Generating code for file anatomist/commands/cLinkWindows.h...
Generating code for file anatomist/commands/cLoadGraphSubObjects.h...
Generating code for file anatomist/commands/cLoadObject.h...
Generating code for file anatomist/commands/cLoadObjects.h...
Generating code for file anatomist/commands/cLoadTransformation.h...
Generating code for file anatomist/commands/cLoadTransformationGraph.h...
Generating code for file anatomist/commands/cNewId.h...
Generating code /casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/utility/dynamic.h:41: warning: Found unknown command '\function'
/casa/host/build/include/aims/utility/dynamic.h:95: warning: Found unknown command '\function'
/casa/host/build/include/aims/utility/dynamic.h:95: warning: Found unknown command '\function'
/casa/host/build/include/aims/utility/dynamic.h:41: warning: Found unknown command '\function'
/casa/host/build/include/aims/mesh/meshwatershed.h:73: warning: The following parameters of aims::meshBlobsBifurcation(const AimsSurfaceTriangle &mesh, const std::vector< double > &field, std::vector< int > &idx, std::vector< double > &height, std::vector< int > &father, std::vector< int > &label, double th) are not documented:
parameter 'mesh'
parameter 'field'
parameter 'th'
/casa/host/build/include/aims/mesh/meshwatershed.h:48: warning: argument 'lidx' of command @param is not found in the argument list of aims::meshWatershed(const AimsSurfaceTriangle &mesh, const std::vector< double > &field, std::vector< int > &idx, std::vector< int > &depth, std::vector< int > &major, std::vector< int > &label, double threshold)
/casa/host/build/include/aims/mesh/meshwatershed.h:48: warning: argument 'ldepth' of command @param is not found in the argument list of aims::meshWatershed(const AimsSurfaceTriangle &mesh, const std::vector< double > &field, std::vector< int > &idx, std::vector< int > &depth, std::vector< int > &major, std::vector< int > &label, double threshold)
/casa/host/build/include/aims/mesh/meshwatershed.h:48: warning: argument 'lmajor' of command @param is not found in the argument list of aims::meshWatershed(const AimsSurfaceTriangle &mesh, const std::vector< double > &field, std::vector< int > &idx, std::vector< int > &depth, std::vector< int > &major, std::vector< int > &label, double threshold)
/casa/host/build/include/aims/mesh/meshwatershed.h:56: warning: The following parameters of aims::meshWatershed(const AimsSurfaceTriangle &mesh, const std::vector< double > &field, std::vector< int > &idx, std::vector< int > &depth, std::vector< int > &major, std::vector< int > &label, double threshold) are not documented:
parameter 'mesh'
parameter 'field'
parameter 'idx'
parameter 'depth'
parameter 'major'
parameter 'threshold'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:78: warning: argument 'Point4dl' of command @param is not found in the argument list of aims::ImageAlgorithmInterface< T >::getOutputImageDimensions(const Point4dl &dims) const
/casa/host/build/include/aims/algorithm/imagealgorithm.h:84: warning: The following parameter of aims::ImageAlgorithmInterface::getOutputImageDimensions(const Point4dl &dims) const is not documented:
parameter 'dims'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:89: warning: argument 'Point4df' of command @param is not found in the argument list of aims::ImageAlgorithmInterface< T >::getOutputImageVoxelSize(const Point4df &voxelsize) const
/casa/host/build/include/aims/algorithm/imagealgorithm.h:95: warning: The following parameter of aims::ImageAlgorithmInterface::getOutputImageVoxelSize(const Point4df &voxelsize) const is not documented:
parameter 'voxelsize'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:219: warning: argument 'Point4dl' of command @param is not found in the argument list of aims::ImageAlgorithm< T >::getOutputImageDimensions(const Point4dl &dims) const inherited from member getOutputImageDimensions at line 78 in file /casa/host/build/include/aims/algorithm/imagealgorithm.h
/casa/host/build/include/aims/algorithm/imagealgorithm.h:219: warning: The following parameter of aims::ImageAlgorithm::getOutputImageDimensions(const Point4dl &dims) const is not documented:
parameter 'dims'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:223: warning: argument 'Point4df' of command @param is not found in the argument list of aims::ImageAlgorithm< T >::getOutputImageVoxelSize(const Point4df &voxelsize) const inherited from member getOutputImageVoxelSize at line 89 in file /casa/host/build/include/aims/algorithm/imagealgorithm.h
/casa/host/build/include/aims/algorithm/imagealgorithm.h:223: warning: The following parameter of aims::ImageAlgorithm::getOutputImageVoxelSize(const Point4df &voxelsize) const is not documented:
parameter 'voxelsize'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:319: warning: The following parameter of aims::ImageAlgorithmSwitch< T, false >::execute(ImageAlgorithmInterface< T > &algo, const carto::VolumeRef< T > &in, carto::VolumeRef< T > &out, int verbose=carto::verbose) is not documented:
parameter 'verbose'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:350: warning: The following parameter of aims::ImageAlgorithmSwitch< T, true >::execute(ImageAlgorithmInterface< ChannelType > &algo, const carto::VolumeRef< T > &in, carto::VolumeRef< T > &out, int verbose) is not documented:
parameter 'verbose'
r compound MEstimatorFunc...
Generating docs for compound Minimisation...
Generating docs for compound Moment...
Generating docs for compound MomentBase...
Generating docs for compound MomentFactory...
Generating docs for compound MomentIncrementalStrategy...
Generating docs for compound MomentInvariant...
Generating docs for compound MomentNormalStrategy...
Generating docs for compound MomentStrategy...
Generating docs for compound MomentSurfacicStrategy...
Generating docs for compound MomentTriangleFactory...
Generating docs for compound MomentTriangleStrategy...
Generating docs for compound MomentVolumicStrategy...
Generating docs for compound MpiDataTypeCode...
Generating docs for compound MSFunc...
Generating docs for compound NormalDeviates...
Generating docs for compound ObjectiveFunc...
Generating docs for compound Optimizer...
Generating docs for compound OptimizerProbe...
Generating docs for compound PowellOptimizer...
Generating docs for compound PVItem...
Generating docs for compound PVVectorItem...
Generating docs for compound Pyramid...
Generating docs for compound PyramidFunc...
Generating docs for compound RecursiveGaussian...
Generating docs for compound Sampler...
Generating docs for compound ScaleControl...
Generating docs for compound SimpleHistogram...
Generating docs for compound SingleOptimizer...
Generating docs for compound SobelGradient...
Generating docs for compound SobelGradient< T, 2 >...
Generating docs for compound SoftDecisionSimilarComponent...
Generating docs for compound TabulSpline...
Generating docs for compound TalairachACPCNorm...
Generating docs for compound TalairachBoundingBoxPoints...
Generating docs for compound TalairachBox...
Generating docs for compound TalairachBoxBase...
Generating docs for compound TalairachPoints...
Generating docs for compound TalairachReferential...
Generating docs for compound TalairachVolume...
Generating docs for compound TopologicalClassification...
Generating docs for compound TopologicalClassificationBase...
Generating docs for compound TopologicalClassificationMeaning...
Generating docs for compound TopologicalClassifier...
Generating docs for compound TopologicalClassifier< aims::BucketMap< T > >...
Generating docs for compound TopologicalClassifier< carto::VolumeRef< T > >...
Generating docs for compound TopologicalRelation...
Generating docs for compound Topology...
Generating docs for compound TopologyBase...
Generating docs for compound Transformation...
Generating docs for compound TriangulationMoment...
Generating docs for compound UniformDeviates...
Generating docs for compound WLMSEstimator...
Generating namespace index...
Generating docs for namespace aims
Generating docs for compound aims::ImageAlgorithmInterface...
Generating docs for compound aims::ImageAlgorithm...
Generating docs for compound aims::ImageAlgorithmSwitch...
Generating docs for compound aims::ImageAlgorithmSwitch< T, false >...
Generating docs for compound aims::ImageAlgorithmSwitch< T, true >...
Generating docs for compound aims::Individuals...
Generating docs for compound aims::ClassifStrategy...
Generating docs for compound aims::Distance...
Generating docs for compound aims::DynamicStrategy...
Generating docs for compound aims::IterativeClassification...
Generating docs for compound aims::KmeansStrategy...
Generating docs for compound aims::PpcaAnalyserElement...
Generating docs for compound aims::MixtureOfPPCA...
Generating docs for compound aims::PcaStrategy...
Generating docs for compound aims::GradientAdvection...
Generating docs for compound aims::FastMarching...
Generating docs for compound aims::Point3dfCompare...
Generating docs for compound aims::Point3dCompare...
Generating docs for compound aims::PairCompare...
Generating docs for compound aims::SetCompare...
Generating docs for compound aims::RealToRealFunctionTabulation...
Generating docs for compound aims::FoldGraphAttributes...
Generating docs for compound aims::FoldArgOverSegment...
Generating docs for compound aims::GeodesicPath...
Generating docs for compound aims::RegularBinnedHistogram...
Genfor file anatomist/commands/cNewPalette.h...
Generating code for file anatomist/commands/cObjectInfo.h...
Generating code for file anatomist/commands/cOutput.h...
Generating code for file anatomist/commands/cPaintParams.h...
Generating code for file anatomist/commands/cPopupPalette.h...
Generating code for file anatomist/commands/cReloadObject.h...
Generating code for file anatomist/commands/cRemoveObject.h...
Generating code for file anatomist/commands/cSaveObject.h...
Generating code for file anatomist/commands/cSaveTransformation.h...
Generating code for file anatomist/commands/cSaveTransformationGraph.h...
Generating code for file anatomist/commands/cSelect.h...
Generating code for file anatomist/commands/cSelectByHierarchy.h...
Generating code for file anatomist/commands/cServer.h...
Generating code for file anatomist/commands/cSetConnThres.h...
Generating code for file anatomist/commands/cSetControl.h...
Generating code for file anatomist/commands/cSetMaterial.h...
Generating code for file anatomist/commands/cSetObjectPalette.h...
Generating code for file anatomist/commands/cShowObject.h...
Generating code for file anatomist/commands/cSliceParams.h...
Generating code for file anatomist/commands/cTexturingParams.h...
Generating code for file anatomist/commands/cWindowBlock.h...
Generating code for file anatomist/commands/cWindowConfig.h...
Generating code for file anatomist/config/anatomist_config.h...
Generating code for file anatomist/constrainteditor/wConstraintEditor.h...
Generating code for file anatomist/control/abstractMenuHandler.h...
Generating code for file anatomist/control/backPixmap_P.h...
Generating code for file anatomist/control/coloredpixmap.h...
Generating code for file anatomist/control/controlConfig.h...
Generating code for file anatomist/control/controlMenuHandler.h...
Generating code for file anatomist/control/dynsegmentcontrol.h...
Generating code for file anatomist/control/graphParams.h...
Generating code for file anatomist/control/labelnamingcontrol.h...
Generating code for file anatomist/control/levelsetcontrol.h...
Generating code for file anatomist/control/listboxeditor.h...
Generating code for file anatomist/control/nodeselectioncontrol.h...
Generating code for file anatomist/control/objectDrag.h...
Generating code for file anatomist/control/paintcontrol.h...
Generating code for file anatomist/control/qAbout.h...
Generating code for file anatomist/control/qImageLabel.h...
Generating code for file anatomist/control/qObjTree.h...
Generating code for file anatomist/control/qWinTree.h...
Generating code for file anatomist/control/surfpaintcontrol.h...
Generating code for file anatomist/control/toolTips-qt.h...
Generating code for file anatomist/control/wControl.h...
Generating code for file anatomist/control/wcontrolevents.h...
Generating code for file anatomist/control/whatsNew.h...
Generating code for file anatomist/control/winconfigio.h...
Generating code for file anatomist/control/windowdrag.h...
Generating code for file anatomist/control/wPreferences.h...
Generating code for file anatomist/controler/action.h...
Generating code for file anatomist/controler/actiondictionary.h...
Generating code for file anatomist/controler/actionpool.h...
Generating code for file anatomist/controler/control.h...
Generating code for file anatomist/controler/control_d.h...
Generating code for file anatomist/controler/controldictionary.h...
Generating code for file anatomist/controler/controlgroupdictionary.h...
Generating code for file anatomist/controler/controlmanager.h...
Generating code for file anatomist/controler/controlswitch.h...
Generating code for file anatomist/controler/icondictionary.h...
Generating code for file anatomist/controler/view.h...
Generating code for file anatomist/dialogs/colorDialog.h...
Generating code for file anatomist/dialogs/colorWidget.h...
Generating code for file anatomist/dialogs/qclickgraphicsview.h...
Generating code for file anatomist/dialogs/qmagnetslider.h...
Generating code for file anatomist/dialogs/qScopeLineEdit.h...
Generating code for file anatomist/erpio/erpR./casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
erating docs for compound aims::InterpolatedVolume...
Generating docs for compound aims::RoiSelectorReader...
Generating docs for compound aims::RoiGtmReader...
Generating docs for compound aims::RoiGtmWriter...
Generating docs for compound aims::DiscriminantAnalysisElement...
Generating docs for compound aims::DiscriminantAnalysis...
Generating docs for compound aims::BaseHarrisDetector...
Generating docs for compound aims::HarrisDetector...
Generating docs for compound aims::HarrisDetector< T, 2 >...
Generating docs for compound aims::ProbabilisticPcaElement...
Generating docs for compound aims::ProbabilisticPca...
Generating docs for compound aims::BSplineOrder...
Generating docs for compound aims::BSplineOrder< 0 >...
Generating docs for compound aims::BSpline...
Generating docs for compound aims::FastBSpline...
Generating docs for compound aims::TabulBSpline...
Generating docs for compound aims::DiscreteBSpline...
Generating docs for compound aims::GeometricProperties...
Generating docs for compound aims::Curvature...
Generating docs for compound aims::CurvatureFactory...
Generating docs for compound aims::FiniteElementCurvature...
Generating docs for compound aims::BoixCurvature...
Generating docs for compound aims::BarycenterCurvature...
Generating docs for compound aims::BoixGaussianCurvature...
Generating docs for compound aims::GaussianCurvature...
Generating docs for compound aims::VertexRemover...
Generating docs for compound aims::MeshInterpoler...
Generating docs for nested compound aims::MeshInterpoler::Private...
Generating docs for compound aims::CoordinatesFieldMeshInterpoler...
Generating docs for compound aims::MorphoGreyLevel...
Generating docs for compound aims::PointsDistribution...
Generating docs for nested compound aims::PointsDistribution::CoulombAndRestoringForce...
Generating docs for nested compound aims::PointsDistribution::CoulombForce...
Generating docs for nested compound aims::PointsDistribution::ForceFunction...
Generating docs for nested compound aims::PointsDistribution::MoveConstraints...
Generating docs for nested compound aims::PointsDistribution::SphereMove...
Generating docs for compound aims::DericheSmoother...
Generating docs for compound aims::PeronaMalikSmoother...
Generating docs for compound aims::FiniteElementSmoother...
Generating docs for compound aims::ltstr_p3d...
Generating docs for compound aims::ltstr_p3d< Point3d >...
Generating docs for compound aims::ltstr_p3d< std::pair< Point3df, uint > >...
Generating docs for compound aims::MaximumPoint...
Generating docs for compound aims::SaddlePoint...
Generating docs for compound aims::GreyLevelBlob...
Generating docs for compound aims::BlobMeasurements...
Generating docs for compound aims::ExtractGreyLevelBlobs...
Generating docs for compound aims::GreyLevelBlobTools...
Generating docs for compound aims::BaseScaleSpace...
Generating docs for compound aims::ScaleSpace...
Generating docs for nested compound aims::ScaleSpace::BlobDescriptor...
Generating docs for compound aims::ScaleSpace< carto::VolumeRef< T >, carto::VolumeRef< T > >...
Generating docs for compound aims::ScaleSpace< AimsSurface< D, Void >, Texture< T > >...
Generating docs for compound aims::ScaleLevel...
Generating docs for compound aims::ScaleLevel< carto::VolumeRef< T >, carto::VolumeRef< T > >...
Generating docs for compound aims::ScaleLevel< AimsSurface< D, Void >, Texture< T > >...
Generating docs for compound aims::Smoother...
Generating docs for compound aims::Smoother< carto::VolumeRef< T >, carto::VolumeRef< T > >...
Generating docs for compound aims::Smoother< AimsSurface< D, Void >, Texture< T > >...
Generating docs for compound aims::PrimalSketch...
Generating docs for compound aims::ScaleSpaceBlob...
Generating docs for compound aims::Bifurcation...
Generating docs for compound aims::ltstr_blob...
Generating docs for compound aims::Primalsketch2graph...
Generating docs for compound aims::CoupledSmoother...
Generating docs for compound aims::CoupledSmoother< carto::VolumeRef< T >, carto::VolumeRef< T > >...
Generating docs for compound aims:h...
Generating code for file anatomist/erpio/erpWraper.h...
Generating code for file anatomist/fusion/defFusionMethods.h...
Generating code for file anatomist/fusion/fusionChooser.h...
Generating code for file anatomist/fusion/fusionFactory.h...
Generating code for file anatomist/gradientwidget/gradient.h...
Generating code for file anatomist/gradientwidget/gradwidget.h...
Generating code for file anatomist/gradientwidget/spline.h...
Generating code for file anatomist/graph/AGraphIterator.h...
Generating code for file anatomist/graph/attribAObject.h...
Generating code for file anatomist/graph/Graph.h...
Generating code for file anatomist/graph/GraphObject.h...
Generating code for file anatomist/graph/pythonAObject.h...
Generating code for file anatomist/graph/qgraphproperties.h...
Generating code for file anatomist/hierarchy/hierarchy.h...
Generating code for file anatomist/interface/qwSurfMatch.h...
Generating code for file anatomist/interpoler/interpoler.h...
Generating code for file anatomist/interpoler/interpolMethod.h...
Generating code for file anatomist/landmark/graphLandmark.h...
Generating code for file anatomist/landmark/landmFactory.h...
Generating code for file anatomist/landmark/landmPicker.h...
Generating code for file anatomist/landmark/plane.h...
Generating code for file anatomist/misc/error.h...
Generating code for file anatomist/mobject/Fusion2D.h...
Generating code for file anatomist/mobject/Fusion3D.h...
Generating code for file anatomist/mobject/glmobject.h...
Generating code for file anatomist/mobject/globjectlist.h...
Generating code for file anatomist/mobject/globjectvector.h...
Generating code for file anatomist/mobject/MObject.h...
Generating code for file anatomist/mobject/ObjectList.h...
Generating code for file anatomist/mobject/objectVector.h...
Generating code for file anatomist/mobject/wFusion2D.h...
Generating code for file anatomist/mobject/wFusion3D.h...
Generating code for file anatomist/module/anasurfmatch.h...
Generating code for file anatomist/module/histogram.h...
Generating code for file anatomist/module/profile.h...
Generating code for file anatomist/module/surfpaintmodule.h...
Generating code for file anatomist/module/surfpainttools.h...
Generating code for file anatomist/module/volrenderfusionmethod.h...
Generating code for file anatomist/module/volrendermodule.h...
Generating code for file anatomist/object/actions.h...
Generating code for file anatomist/object/clippedobject.h...
Generating code for file anatomist/object/loadevent.h...
Generating code for file anatomist/object/mobjectio.h...
Generating code for file anatomist/object/Object.h...
Generating code for file anatomist/object/objectConverter.h...
Generating code for file anatomist/object/objectmenu.h...
Generating code for file anatomist/object/objectmenuCallbacks.h...
Generating code for file anatomist/object/objectparamselect.h...
Generating code for file anatomist/object/objectutils.h...
Generating code for file anatomist/object/objectutils_d.h...
Generating code for file anatomist/object/optionMatcher.h...
Generating code for file anatomist/object/oReader.h...
Generating code for file anatomist/object/qtextureparams.h...
Generating code for file anatomist/object/selfsliceable.h...
Generating code for file anatomist/object/sliceable.h...
Generating code for file anatomist/object/texturepanel.h...
Generating code for file anatomist/object/texturewin.h...
Generating code for file anatomist/object/volrender.h...
Generating code for file anatomist/object/volrenderpanel.h...
Generating code for file anatomist/object/volrendershader.h...
Generating code for file anatomist/observer/Observable.h...
Generating code for file anatomist/observer/observcreat.h...
Generating code for file anatomist/observer/Observer.h...
Generating code for file anatomist/primitive/primitive.h...
Generating code for file anatomist/processor/Command.h...
Generating code for file anatomist/processor/context.h...
Generating code for file anatomist/processor/errormessage.h...
Generating code for file anatomist/processor/event.h...
Generating code f/casa/host/build/include/aims/resampling/resampler.h:228: warning: argument 'transform' of command @param is not found in the argument list of aims::Resampler< T >::resample_inv(const carto::Volume< T > &input_data, const soma::Transformation3d &inverse_transform_to_mm, const T &background, carto::Volume< T > &output_data, bool verbose=false) const
/casa/host/build/include/aims/resampling/resampler.h:247: warning: The following parameter of aims::Resampler::resample_inv(const carto::Volume< T > &input_data, const soma::Transformation3d &inverse_transform_to_mm, const T &background, carto::Volume< T > &output_data, bool verbose=false) const is not documented:
parameter 'inverse_transform_to_mm'
/casa/host/build/include/aims/resampling/resampler.h:205: warning: argument 'inverse_transform' of command @param is not found in the argument list of aims::Resampler< T >::resample_inv(const carto::Volume< T > &input_data, const soma::Transformation3d &inverse_transform_to_mm, const T &background, const Point3df &output_location, T &output_value, int timestep) const
/casa/host/build/include/aims/resampling/resampler.h:221: warning: The following parameter of aims::Resampler::resample_inv(const carto::Volume< T > &input_data, const soma::Transformation3d &inverse_transform_to_mm, const T &background, const Point3df &output_location, T &output_value, int timestep) const is not documented:
parameter 'inverse_transform_to_mm'
or file anatomist/processor/event_doc.h...
Generating code for file anatomist/processor/pipeReader.h...
Generating code for file anatomist/processor/pipeReaderP.h...
Generating code for file anatomist/processor/Processor.h...
Generating code for file anatomist/processor/Reader.h...
Generating code for file anatomist/processor/Registry.h...
Generating code for file anatomist/processor/Serializer.h...
Generating code for file anatomist/processor/server.h...
Generating code for file anatomist/processor/unserializer.h...
Generating code for file anatomist/processor/Writer.h...
Generating code for file anatomist/qtvr3/creator.h...
Generating code for file anatomist/qtvr3/cubeZbuffer.h...
Generating code for file anatomist/qtvr3/mipShader.h...
Generating code for file anatomist/qtvr3/mpvrShader.h...
Generating code for file anatomist/qtvr3/rfmtShader.h...
Generating code for file anatomist/qtvr3/shader.h...
Generating code for file anatomist/qtvr3/shaderFactory.h...
Generating code for file anatomist/qtvr3/slicing.h...
Generating code for file anatomist/qtvr3/sumShader.h...
Generating code for file anatomist/qtvr3/vector3d.h...
Generating code for file anatomist/qtvr3/vrShader.h...
Generating code for file anatomist/qtvr3/vrsingleton.h...
Generating code for file anatomist/reference/Geometry.h...
Generating code for file anatomist/reference/Referential.h...
Generating code for file anatomist/reference/refobserver.h...
Generating code for file anatomist/reference/refpixmap.h...
Generating code for file anatomist/reference/Transformation.h...
Generating code for file anatomist/reference/transformobserver.h...
Generating code for file anatomist/reference/transfSet.h...
Generating code for file anatomist/reference/wChooseReferential.h...
Generating code for file anatomist/reference/wReferential.h...
Generating code for file anatomist/reference/wReferential_3d.h...
Generating code for file anatomist/selection/postSelector.h...
Generating code for file anatomist/selection/qSelectFactory.h...
Generating code for file anatomist/selection/qSelectWid.h...
Generating code for file anatomist/selection/qSelMenu.h...
Generating code for file anatomist/selection/qwSelAttrib.h...
Generating code for file anatomist/selection/selectFactory.h...
Generating code for file anatomist/selection/selector.h...
Generating code for file anatomist/selection/wSelChooser.h...
Generating code for file anatomist/sparsematrix/connectivitymatrix.h...
Generating code for file anatomist/sparsematrix/sparsematrix.h...
Generating code for file anatomist/stdmod/stdmod.h...
Generating code for file anatomist/surface/cutmesh.h...
Generating code for file anatomist/surface/fusion2Dmesh.h...
Generating code for file anatomist/surface/fusiontexsurf.h...
Generating code for file anatomist/surface/glcomponent.h...
Generating code for file anatomist/surface/glcomponent_internals.h...
Generating code for file anatomist/surface/globject.h...
Generating code for file anatomist/surface/mtexture.h...
Generating code for file anatomist/surface/planarfusion3d.h...
Generating code for file anatomist/surface/Shader.h...
Generating code for file anatomist/surface/shownormals.h...
Generating code for file anatomist/surface/shownormalsgui.h...
Generating code for file anatomist/surface/surface.h...
Generating code for file anatomist/surface/surface_d.h...
Generating code for file anatomist/surface/tesselatedmesh.h...
Generating code for file anatomist/surface/texsurface.h...
Generating code for file anatomist/surface/textobject.h...
Generating code for file anatomist/surface/texture.h...
Generating code for file anatomist/surface/transformedobject.h...
Generating code for file anatomist/surface/triangulated.h...
Generating code for file anatomist/surface/vectorfield.h...
Generating code for file anatomist/surface/wvectorfield.h...
Generating code for file anatomist/surfmatcher/surfMatcher.h...
Generating code for file anatomist/surfmatcher/surfMatchMethod.h...
Generating code for file anatomist/volume/slice.h...
Generating code for file anatomist/volume/Volume.h...
Generating code for writing output... [ 66%] pyanatomist_addons
/casa/host/build/include/aims/scalespace/meshDiffuse.h:69: warning: The following parameters of aims::TextureSmoothing::surfaceBlockSmooth(const std::string &latt_filename, const std::string *val_filename, const std::string &path_name, unsigned nscans, float dt, unsigned iter, unsigned scans_block, unsigned nodes_block, unsigned nnodes, unsigned ncolPINV, const std::string *outfiles, const float HMAX, const float Umax) are not documented:
parameter 'HMAX'
parameter 'Umax'
writing output... [ 69%] pyanatomist_base
/casa/host/build/include/aims/signalfilter/filteringfunction_element.h:74: warning: The following parameter of aims::ElementFilteringFunction::execute(const carto::VolumeRef< T > &in, const carto::rc_ptr< StructuringElement > &se) const=0 is not documented:
parameter 'se'
:CoupledDiffusion2DSmoother...
Generating docs for compound aims::ConvolutionSubSampler...
Generating docs for compound aims::DirectBSplineSubSampler...
Generating docs for compound aims::MovingAverageSubSampler...
Generating docs for compound aims::MovingAverageCascadeSubSampler...
Generating docs for compound aims::SplinePyramid...
Generating docs for compound aims::SplinePyramidBuilder...
Generating docs for compound aims::DiscreteU...
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Generating docs for compound aims::SubSamplingPyramidBuilder...
Generating docs for compound aims::FfdTransformation...
Generating docs for compound aims::SplineFfd...
Generating docs for compound aims::TrilinearFfd...
Generating docs for compound aims::Writer< aims::FfdTransformation >...
Generating docs for compound aims::CubicResampler...
Generating docs for compound aims::HarmonicCageMeshResampler...
Generating docs for compound aims::LinearResampler...
Generating docs for compound aims::MajorityLabelResampler...
Generating docs for compound aims::MeshToVoxelsResampler...
Generating docs for compound aims::NearestNeighborResampler...
Generating docs for compound aims::QuadraticResampler...
Generating docs for compound aims::QuarticResampler...
Generating docs for compound aims::QuinticResampler...
Generating docs for compound aims::Resampler...
Generating docs for compound aims::ResamplerFactory...
Generating docs for compound aims::ExtremaDifferenceSubSampling...
Generating docs for compound aims::MajoritySubSampling...
Generating docs for compound aims::MaxSubSampling...
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Generating docs for compound aims::MedianResampler...
Generating docs for compound aims::MedianSubSampling...
Generating docs for compound aims::MinSubSampling...
Generating docs for compound aims::NotNullMeanSubSampling...
Generating docs for compound aims::NotNullMedianSubSampling...
Generating docs for compound aims::SumSubSampling...
Generating docs for compound aims::ConeSamplable...
Generating docs for compound aims::SphereSamplable...
Generating docs for compound aims::SixthOrderResampler...
Generating docs for compound aims::SeventhOrderResampler...
Generating docs for compound aims::MultiChannelResamplerSwitch...
Generating docs for compound aims::SplineResampler...
Generating docs for compound aims::MultiChannelResamplerSwitch< false, T >...
Generating docs for compound aims::MultiChannelResamplerSwitch< true, T >...
Generating docs for compound aims::SubSamplingImageAlgorithm...
Generating docs for compound aims::ClusterArgMaker...
Generating docs for compound aims::RoiGtm...
Generating docs for compound aims::RoiStats...
Generating docs for compound aims::RoiSelector...
Generating docs for compound aims::BucketBlobExtractor...
Generating docs for nested compound aims::BucketBlobExtractor::BlobsMerger...
Generating docs for nested compound aims::BucketBlobExtractor::BlobStruct...
Generating docs for nested compound aims::BucketBlobExtractor::GLBlobsMerger...
Generating docs for nested compound aims::BucketBlobExtractor::NoStopCriterion...
Generating docs for nested compound aims::BucketBlobExtractor::OneComponentStopCriterion...
Generating docs for nested compound aims::BucketBlobExtractor::StopCriterion...
Generating docs for compound aims::TextureSmoothing...
Generating docs for compound aims::ConvolutionFilter...
Generating docs for compound aims::ExtremaDifferenceFilter...
Generating docs for compound aims::BaseDiffusionSmoother...
Generating docs for compound aims::DiffusionSmoother...
Generating docs for compound aims::BaseMaskedDiffusionSmoother...
Generating docs for compound aims::MaskedDiffusionSmoother...
Generating docs for compound aims::MaskedDiffusionSmoother< T, std::vector< Point3df > >...
Generating docs for compound aims::MaskedDiffusionSmoother< T, carto::VolumeRef< short > >...
Generating docs for compound aims::FilteringFunctionInterface...
Generating docs for compound aims::ElementFilteringFunction...
Generating docs for compound aims::ElementFilteringFunctionFactory...
Generatin[ 91%] Generating AimsComposeTransformation help file ...
file anatomist/volume/volumeview.h...
Generating code for file anatomist/window/colorstyle.h...
Generating code for file anatomist/window/controlledWindow.h...
Generating code for file anatomist/window/glcaps.h...
Generating code for file anatomist/window/glcontext.h...
Generating code for file anatomist/window/glwidget.h...
Generating code for file anatomist/window/glwidgetmanager.h...
Generating code for file anatomist/window/qwinblock.h...
Generating code for file anatomist/window/qwindow.h...
Generating code for file anatomist/window/qWinFactory.h...
Generating code for file anatomist/window/viewstate.h...
Generating code for file anatomist/window/Window.h...
Generating code for file anatomist/window/winFactory.h...
Generating code for file anatomist/window3D/agraphicsview_p.h...
Generating code for file anatomist/window3D/annotedgraph.h...
Generating code for file anatomist/window3D/boxviewslice.h...
Generating code for file anatomist/window3D/connmatrixcontrol.h...
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Generating code for file anatomist/window3D/cursor.h...
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Generating code for file anatomist/window3D/labeleditaction.h...
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Generating code for file anatomist/window3D/trackball.h...
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Generating code for file anatomist/window3D/trackOblique.h...
Generating code for file anatomist/window3D/trackObliqueSlice.h...
Generating code for file anatomist/window3D/transformer.h...
Generating code for file anatomist/window3D/wFixedPointOfView.h...
Generating code for file anatomist/window3D/window3D.h...
Generating code for file anatomist/window3D/window3D_private.h...
Generating code for file anatomist/window3D/wLightModel.h...
Generating code for file anatomist/window3D/wTools3D.h...
Generating code for file anatomist/window3D/zoomDialog.h...
Generating code for file anatomist/winhisto/histo.h...
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Generating code for file anatomist/winprof/profFactory.h...
Generating code for file anatomist/winprof/profStrategy.h...
Generating code for file anatomist/winprof/profT.h...
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Generating code for file anatomist/winprof/profX.h...
Generating code for file anatomist/winprof/profY.h...
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Generating file documentation...
Generating docs for file anatomist/action/blobsegmentation.h...
Generating docs for file anatomist/action/dynsegmentaction.h...
Generating docs for file anatomist/action/histoplot.h...
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Generating docs for file anatomist/action/roimanagementaction.h...
Generating docs for file anatomist/action/surfpaintaction.h...
Generating docs for file anatomist/application/Anatomist.h...
Generating docs for file anatomist/application/anatomist_doc.h...
Generating docs for file anatomist/application/anatomistinfo.h...
Generating docs for file anatomist/application/fileDialog.h...
Generating docs for file anatomist/application/filedialogextension.h...
Generating docs for file anatomist/application/globalConfig.h...
Generating docs for file anatomist/application/hierarchyeditor.h...
Generating docs for file anatomist/application/listDir.h...
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Generating docs for file anatomist/application/roialgomodule.h...
Generating docs for file anatomist/application/roibasemodule.h...
Generating docs for file anatomist/application/settings.h...
Generating docs for file anatomist/application/syntax.h...
Generating docs for file anatomist/browser/attDescr.h...
Generating docs for file anatomist/browser/attributedchooser.h...
Generating docs for file anatomist/browser/browsercontrol.h...
Generating docs for file anatomist/browser/labeledit.h...
Generating docs for file anatomist/browser/qObjBrowserWid.h...
Generating docs for file anatomist/browser/qwObjectBrowser.h...
Generating docs for file anatomist/browser/stringEdit.h...
Generating docs for file anatomist/bucket/Bucket.h...
Generating docs for file anatomist/color/colortraits.h...
Generating docs for file anatomist/color/Light.h...
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Generating docs for file anatomist/color/palette.h...
Generating docs for file anatomist/color/paletteList.h...
Generating docs for file anatomist/color/paletteselectwidget.h...
Generating docs for file anatomist/color/qwObjPalette.h...
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Generating docs for file anatomist/color/wObjPalette.h...
Generating docs for file anatomist/color/wRendering.h...
Generating docs for file anatomist/commands/cActivateAction.h...
Generating docs for file anatomist/commands/cAddNode.h...
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Generating docs for file anatomist/commands/cApplyBuiltinReferential.h...
Generating docs for file anatomist/commands/cAskTexExtrema.h...
Generating docs for file anatomist/commands/cAssignReferential.h...
Generating docs for file anatomist/commands/cCamera.h...
Generating docs for file anatomist/commands/cChangePalette.h...
Generating docs for file anatomist/commands/cClosePipe.h...
Generating docs for file anatomist/commands/cCloseWindow.h...
Generating docs for file anatomist/commands/cControlsParams.h...
Generating docs for file anatomist/commands/cCreateControlWindow.h...
Generating docs for file anatomist/commands/cCreateGraph.h...
Generating docs for file anatomist/commands/cCreateWindow.h...
Generating docs for file anatomist/commands/cCreateWindowsBlock.h...
Generating docs for file anatomist/commands/cDeleteAll.h...
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Generating docs for file anatomist/commands/cExportTexture.h...
Generating docs for file anatomist/commands/cExternalReference.h...
Generating docs for file anatomist/commands/cExtractTexture.h...
Generating docs for file anatomist/commands/cFusion2DParams.h...
Generating docs for file anatomist/commands/cFusion3DParams.h...
Generating docs for file anatomist/commands/cFusionInfo.h...
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Generating docs for file anatomist/commands/cGenerateTexture.h...
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Generating docs for file anatomist/commands/cGraphDisplayProperties.h...
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Generating docs for file anatomist/commands/cLinkedCursor.h...
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Generating docs for file anatomist/commands/cLoadGraphSubObjects.h...
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Generating docs for file anatomist/commands/cLoadTransformation.h...
Generating docs for file anatomist/commands/cLoadTransformationGraph.h...
Generating docs for file anatomist/commands/cNewId.h...
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Generating docs for file anatomist/commands/cPopupPalette.h...
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Generating docs for file anatomist/commands/cSelect.h...
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Generating docs for file anatomist/commands/cServer.h...
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Generating docs for file anatomist/config/anatomist_config.h...
Generating docs for file anatomist/constrainteditor/wConstraintEditor.h...
Generating docs for file anatomist/control/abstractMenuHandler.h...
Generating docs for file anatomist/control/backPixmap_P.h...
Generating docs for file anatomist/control/coloredpixmap.h...
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Generating docs for file anatomist/control/dynsegmentcontrol.h...
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Generating docs for file anatomist/control/labelnamingcontrol.h...
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Generating docs for file anatomist/control/paintcontrol.h...
Generating docs for file anatomist/control/qAbout.h...
Generating docs for file anatomist/control/qImageLabel.h...
Generating docs for file anatomist/control/qObjTree.h...
Generating docs for file anatomist/control/qWinTree.h...
Generating docs for file anatomist/control/surfpaintcontrol.h...
Generating docs for file anatomist/control/toolTips-qt.h...
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Generating docs for file anatomist/control/wcontrolevents.h...
Generating docs for file anatomist/control/whatsNew.h...
Generating docs for file anatomist/control/winconfigio.h...
Generating docs for file anatomist/control/windowdrag.h...
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Generating docs for file anatomist/controler/action.h...
Generating docs for file anatomist/controler/actiondictionary.h...
Generating docs for file anatomist/controler/actionpool.h...
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Generating docs for file anatomist/controler/control_d.h...
Generating docs for file anatomist/controler/controldictionary.h...
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Generating docs for file anatomist/controler/controlswitch.h...
Generating docs for file anatomist/controler/icondictionary.h...
Generating docs for file anatomist/controler/view.h...
Generating docs for file anatomist/dialogs/colorDialog.h...
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Generating docs for file anatomist/dialogs/qclickgraphicsview.h...
Generating docs for file anatomist/dialogs/qmagnetslider.h...
Generating docs for file anatomist/dialogs/qScopeLineEdit.h...
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Generating docs for file anatomist/fusion/defFusionMethods.h...
Generating docs for file anatomist/fusion/fusionChooser.h...
Generating docs for file anatomistwarning: Included by graph for 'Command.h' not generated, too many nodes (65), threshold is 50. Consider increasing DOT_GRAPH_MAX_NODES.
/fusion/fusionFactory.h...
Generating docs for file anatomist/gradientwidget/gradient.h...
Generating docs for file anatomist/gradientwidget/gradwidget.h...
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Generating docs for file anatomist/object/clippedobject.h...
Generating docs for file anatomist/object/loadevent.h...
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Generating docs for file anatomist/object/Object.h...
Generating docs for file anatomist/object/objectConverter.h...
Generating docs for file anatomist/object/objectmenu.h...
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Generating docs for file anatomist/object/optionMatcher.h...
Generating docs for file anatomist/object/oReader.h...
Generating docs for file anatomist/object/qtextureparams.h...
Generating docs for file anatomist/object/selfsliceable.h...
Generating docs for file anatomist/object/sliceable.h...
Generating docs for file anatomist/object/texturepanel.h...
Generating docs for file anatomist/object/texturewin.h...
Generating docs for file anatomist/object/volrender.h...
Generating docs for file anatomist/object/volrenderpanel.h...
Generating docs for file anatomist/object/volrendershader.h...
Generating docs for file anatomist/observer/Observable.h...
Generating docs for file anatomist/observer/observcreat.h...
Generating docs for file anatomist/observer/Observer.h...
Generating docs for file anatomist/primitive/primitive.h...
Generating docs for file anatomist/processor/Command.h...
Generating docs for file anatomist/processor/context.h...
Generating docs for file anatomist/processor/errormessage.h...
Generating docs for file anatomist/processor/event.h...
Generating docs for file anatomist/processor/event_doc.h...
Generating docs for file anatomist/processor/pipeReader.h...
Generating docs for file anatomist/processor/pipeReaderP.h...
Generating docs for file anatomist/processor/Processor/casa/host/build/include/aims/distancemap/meshdistance.h:86: warning: The following parameter of aims::meshdistance::pairwiseDistanceMaps(const AimsSurface< 3, Void > &mesh, MapType &distmaps, const Texture< T > &inittex, float max_dist=FLT_MAX) is not documented:
parameter 'mesh'
/casa/host/build/include/aims/distancemap/meshdistance.h:99: warning: The following parameter of aims::meshdistance::pairwiseDistanceMaps(const AimsSurface< 3, Void > &mesh, MapType &distmaps, float max_dist=FLT_MAX) is not documented:
parameter 'mesh'
g docs for compound aims::LinearFilteringFunction...
Generating docs for compound aims::LinearFilteringFunctionFactory...
Generating docs for compound aims::FilteringImageAlgorithmInterface...
Generating docs for compound aims::LinearFilteringImageAlgorithm...
Generating docs for compound aims::ElementFilteringImageAlgorithm...
Generating docs for compound aims::GaborFilter...
Generating docs for compound aims::MedianFilter...
Generating docs for compound aims::NotNullMedianFilter...
Generating docs for compound aims::MeanFilter...
Generating docs for compound aims::NotNullMeanFilter...
Generating docs for compound aims::MinFilter...
Generating docs for compound aims::MaxFilter...
Generating docs for compound aims::MajorityFilter...
Generating docs for compound aims::NotNullMajorityFilter...
Generating docs for compound aims::MovingAverageKernel...
Generating docs for compound aims::MovingAverageCascadeKernel...
Generating docs for compound aims::MovingAverageFilter...
Generating docs for compound aims::MovingAverageCascadeFilter...
Generating docs for compound aims::SumFilter...
Generating docs for compound aims::VarFilter...
Generating docs for compound aims::StDevFilter...
Generating docs for compound aims::IIRFilterBase...
Generating docs for compound aims::CausalSinglePoleIIRFilter...
Generating docs for compound aims::SymAllPoleIIRFilter...
Generating docs for compound aims::InverseBSplineFilter...
Generating docs for compound aims::DirectBSplineFilter...
Generating docs for compound aims::FilterType...
Generating docs for compound aims::SpamBase...
Generating docs for compound aims::SpamFromLikelihood...
Generating docs for compound aims::Spam...
Generating docs for compound aims::TransformLeastSquareEstimation...
Generating docs for compound aims::AffineLeastSquareEstimation...
Generating docs for compound aims::RigidLeastSquareEstimation...
Generating docs for compound aims::TranslationLeastSquareEstimation...
Generating docs for compound aims::SimiLeastSquareEstimation...
Generating docs for compound aims::RigidTransformEstimation...
Generating docs for compound aims::BundleTransformer...
Generating docs for namespace aims::convolutionfilter
Generating docs for namespace aims::convolutionsubsampler
Generating docs for namespace aims::internal
Generating docs for namespace aims::internal::fastmarching
Generating docs for compound aims::internal::fastmarching::StorageTrait...
Generating docs for compound aims::internal::fastmarching::StorageTrait< carto::Volume< T > >...
Generating docs for compound aims::internal::fastmarching::StorageTrait< BucketMap< T > >...
Generating docs for namespace aims::knn
Generating docs for compound aims::knn::Distance...
Generating docs for compound aims::knn::EuclidianDistance...
Generating docs for compound aims::knn::SquaredEuclidianDistance...
Generating docs for compound aims::knn::ManhattanDistance...
Generating docs for compound aims::knn::TchebychevDistance...
Generating docs for compound aims::knn::Database...
Generating docs for nested compound aims::knn::Database::DatabaseCompare...
Generating docs for nested compound aims::knn::Database::iterator...
Generating docs for nested compound aims::knn::Database::Vector...
Generating docs for compound aims::knn::MultiDatabase...
Generating docs for compound aims::knn::Heap...
Generating docs for nested compound aims::knn::Heap::MiniHeap...
Generating docs for compound aims::knn::Knn...
Generating docs for compound aims::knn::KnnBruteForce...
Generating docs for compound aims::knn::KnnFriedman...
Generating docs for compound aims::knn::KnnGlobalFriedman...
Generating docs for namespace aims::meshdistance
Generating docs for compound aims::meshdistance::DistMapMatrixTraits...
Generating docs for compound aims::meshdistance::DistMapMatrixTraits< std::vector< T > >...
Generating docs for compound aims::meshdistance::DistMapMatrixTraits< std::map< T, U > >...
Generating docs for namespace aims::meshgraph
Generating docs for compound aims::meshgraph::MeshFaceNode...
Generating docs for compound aims::meshgraph::MeshVertexNode...
Gene/casa/host/build/include/aims/mesh/mesh_graph.h:122: warning: The following parameters of aims::meshgraph::List2GraphMeshConvertor::operator()(TVertexCollection const &vertices, TFaceCollection const &faceIndices, std::vector< std::list< std::size_t > > const &invertedFaceIndices, TNeighborCollection const &neighbors, std::list< TVertexNode > &graph_vertices, std::list< TFaceNode > &graph_faces) are not documented:
parameter 'graph_vertices'
parameter 'graph_faces'
/casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h:137: warning: argument 'Point4dl' of command @param is not found in the argument list of aims::singlechannel::SubSamplingImageAlgorithm< T >::getOutputImageDimensions(const Point4dl &dims) const inherited from member getOutputImageDimensions at line 78 in file /casa/host/build/include/aims/algorithm/imagealgorithm.h
/casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h:137: warning: The following parameter of aims::singlechannel::SubSamplingImageAlgorithm::getOutputImageDimensions(const Point4dl &dims) const is not documented:
parameter 'dims'
/casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h:144: warning: argument 'Point4df' of command @param is not found in the argument list of aims::singlechannel::SubSamplingImageAlgorithm< T >::getOutputImageVoxelSize(const Point4df &voxelsize) const inherited from member getOutputImageVoxelSize at line 89 in file /casa/host/build/include/aims/algorithm/imagealgorithm.h
/casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h:144: warning: The following parameter of aims::singlechannel::SubSamplingImageAlgorithm::getOutputImageVoxelSize(const Point4df &voxelsize) const is not documented:
parameter 'voxelsize'
.h...
Generating docs for file anatomist/processor/Reader.h...
Generating docs for file anatomist/processor/Registry.h...
Generating docs for file anatomist/processor/Serializer.h...
Generating docs for file anatomist/processor/server.h...
Generating docs for file anatomist/processor/unserializer.h...
Generating docs for file anatomist/processor/Writer.h...
Generating docs for file anatomist/qtvr3/creator.h...
Generating docs for file anatomist/qtvr3/cubeZbuffer.h...
Generating docs for file anatomist/qtvr3/mipShader.h...
Generating docs for file anatomist/qtvr3/mpvrShader.h...
Generating docs for file anatomist/qtvr3/rfmtShader.h...
Generating docs for file anatomist/qtvr3/shader.h...
Generating docs for file anatomist/qtvr3/shaderFactory.h...
Generating docs for file anatomist/qtvr3/slicing.h...
Generating docs for file anatomist/qtvr3/sumShader.h...
Generating docs for file anatomist/qtvr3/vector3d.h...
Generating docs for file anatomist/qtvr3/vrShader.h...
Generating docs for file anatomist/qtvr3/vrsingleton.h...
Generating docs for file anatomist/reference/Geometry.h...
Generating docs for file anatomist/reference/Referential.h...
Generating docs for file anatomist/reference/refobserver.h...
Generating docs for file anatomist/reference/refpixmap.h...
Generating docs for file anatomist/reference/Transformation.h...
Generating docs for file anatomist/reference/transformobserver.h...
Generating docs for file anatomist/reference/transfSet.h...
Generating docs for file anatomist/reference/wChooseReferential.h...
Generating docs for file anatomist/reference/wReferential.h...
Generating docs for file anatomist/reference/wReferential_3d.h...
Generating docs for file anatomist/selection/postSelector.h...
Generating docs for file anatomist/selection/qSelectFactory.h...
Generating docs for file anatomist/selection/qSelectWid.h...
Generating docs for file anatomist/selection/qSelMenu.h...
Generating docs for file anatomist/selection/qwSelAttrib.h...
Generating docs for file anatomist/selection/selectFactory.h...
Generating docs for file anatomist/selection/selector.h...
Generating docs for file anatomist/selection/wSelChooser.h...
Generating docs for file anatomist/sparsematrix/connectivitymatrix.h...
Generating docs for file anatomist/sparsematrix/sparsematrix.h...
Generating docs for file anatomist/stdmod/stdmod.h...
Generating docs for file anatomist/surface/cutmesh.h...
Generating docs for file anatomist/surface/fusion2Dmesh.h...
Generating docs for file anatomist/surface/fusiontexsurf.h...
Generating docs for file anatomist/surface/glcomponent.h...
Generating docs for file anatomist/surface/glcomponent_internals.h...
Generating docs for file anatomist/surface/globject.h...
Generating docs for file anatomist/surface/mtexture.h...
Generating docs for file anatomist/surface/planarfusion3d.h...
Generating docs for file anatomist/surface/Shader.h...
Generating docs for file anatomist/surface/shownormals.h...
Generating docs for file anatomist/surface/shownormalsgui.h...
Generating docs for file anatomist/surface/surface.h...
Generating docs for file anatomist/surface/surface_d.h...
Generating docs for file anatomist/surface/tesselatedmesh.h...
Generating docs for file anatomist/surface/texsurface.h...
Generating docs for file anatomist/surface/textobject.h...
Generating docs for file anatomist/surface/texture.h...
Generating docs for file anatomist/surface/transformedobject.h...
Generating docs for file anatomist/surface/triangulated.h...
Generating docs for file anatomist/surface/vectorfield.h...
Generating docs for file anatomist/surface/wvectorfield.h...
Generating docs for file anatomist/surfmatcher/surfMatcher.h...
Generating docs for file anatomist/surfmatcher/surfMatchMethod.h...
Generating docs for file anatomist/volume/slice.h...
Generating docs for file anatomist/volume/Volume.h...
Generating docs for file anatomist/volume/volumeview.h...
Generating docs for file anatomist/window/colorstyle.h...
Generating docs for file anatomist/window/controlledWindow.h...
Generating docs for file anatomist/window/glcaps.h...
Genera/casa/host/build/include/aims/resampling/bucketmapsampler.h:67: warning: argument 'object' of command @param is not found in the argument list of aimsalgo::BucketMapSampler< T, D >::sample(Samplable< T, D > *data, unsigned dimensionIndex, AimsVector< short, D > &partialCoords, aims::BucketMap< Void > &result)
/casa/host/build/include/aims/resampling/bucketmapsampler.h:73: warning: The following parameter of aimsalgo::BucketMapSampler::sample(Samplable< T, D > *data, unsigned dimensionIndex, AimsVector< short, D > &partialCoords, aims::BucketMap< Void > &result) is not documented:
parameter 'data'
/casa/host/build/include/anatomist/landmark/landmPicker.h:80: warning: The following parameter of ALandmarkPicker::nearestEuclidian(anatomist::GLComponent *obj, const Point3df &pt, unsigned &index, Point3df &vpos) is not documented:
parameter 'vpos'
/casa/host/build/include/anatomist/landmark/landmPicker.h:65: warning: The following parameter of ALandmarkPicker::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/reference/wChooseReferential.h:71: warning: The following parameter of ChooseReferentialWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
reading sources... [ 75%] python_bv_processing
/casa/host/build/include/anatomist/erpio/erpWraper.h:71: warning: The following parameter of ErpWraper::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/window3D/wFixedPointOfView.h:57: warning: The following parameter of FixedPointOfViewWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/mobject/wFusion2D.h:56: warning: The following parameter of Fusion2DWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/mobject/wFusion3D.h:57: warning: The following parameter of Fusion3DWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/landmark/graphLandmark.h:74: warning: The following parameter of GraphLandmarkPicker::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
rating docs for compound aims::meshgraph::List2GraphMeshConvertor...
Generating docs for compound aims::meshgraph::Graph2ListMeshConvertor...
Generating docs for namespace aims::singlechannel
Generating docs for compound aims::singlechannel::SubSamplingImageAlgorithm...
Generating docs for compound aims::singlechannel::LinearFilteringImageAlgorithm...
Generating docs for compound aims::singlechannel::ElementFilteringImageAlgorithm...
Generating docs for namespace aims::strel
Generating docs for namespace aims::util
Generating docs for namespace aimsalgo
Generating docs for compound aimsalgo::BucketMapSampler...
Generating docs for compound aimsalgo::GeneralSampler...
Generating docs for compound aimsalgo::Samplable...
Generating docs for compound aimsalgo::Polynomial...
Generating docs for namespace carto
Generating docs for namespace geodesic
Generating docs for compound geodesic::GeodesicAlgorithmBase...
Generating docs for compound geodesic::SubdivisionNode...
Generating docs for compound geodesic::GeodesicAlgorithmSubdivision...
Generating docs for compound geodesic::DijkstraNode1...
Generating docs for compound geodesic::GeodesicAlgorithmDijkstraAlternative...
Generating docs for compound geodesic::DijkstraNode...
Generating docs for compound geodesic::GeodesicAlgorithmDijkstra...
Generating docs for compound geodesic::SimlpeMemoryAllocator...
Generating docs for compound geodesic::MemoryAllocator...
Generating docs for compound geodesic::OutputBuffer...
Generating docs for compound geodesic::Interval...
Generating docs for compound geodesic::IntervalWithStop...
Generating docs for compound geodesic::IntervalList...
Generating docs for compound geodesic::SurfacePointWithIndex...
Generating docs for compound geodesic::SortedSources...
Generating docs for compound geodesic::SimpleVector...
Generating docs for compound geodesic::MeshElementBase...
Generating docs for compound geodesic::Point3D...
Generating docs for compound geodesic::Vertex...
Generating docs for compound geodesic::Face...
Generating docs for compound geodesic::Edge...
Generating docs for compound geodesic::SurfacePoint...
Generating docs for compound geodesic::HalfEdge...
Generating docs for compound geodesic::GeodesicAlgorithmExact...
Generating docs for compound geodesic::edge_visible_from_source...
Generating docs for compound geodesic::Mesh...
Generating docs for compound geodesic::GeodesicAlgorithmGraphBase...
Generating docs for namespace soma
Generating graph info page...
Generating directory documentation...
Generating dependency graph for directory aims
Generating dependency graph for directory aims/classification
Generating dependency graph for directory aims/compression
Generating dependency graph for directory aims/connectivity
Generating dependency graph for directory aims/distancemap
Generating dependency graph for directory aims/estimation
Generating dependency graph for directory aims/ffd
Generating dependency graph for directory aims/foldgraph
Generating dependency graph for directory aims/geodesicpath
Generating dependency graph for directory aims/information
Generating dependency graph for directory aims/interpolation
Generating dependency graph for directory aims/io
Generating dependency graph for directory aims/math
Generating dependency graph for directory aims/mesh
Generating dependency graph for directory aims/moment
Generating dependency graph for directory aims/morphology
Generating dependency graph for directory aims/optimization
Generating dependency graph for directory aims/primalsketch
Generating dependency graph for directory aims/pyramid
Generating dependency graph for directory aims/registration
Generating dependency graph for directory aims/resampling
Generating dependency graph for directory aims/roi
Generating dependency graph for directory aims/scalespace
Generating dependency graph for directory aims/signalfilter
Generating dependency graph for directory aims/threshold
Generating dependency graph for directory aims/transform
Generating index page...
Generating page index...
Generating module index...
Generating n/casa/host/build/include/anatomist/window3D/wLightModel.h:57: warning: The following parameter of LightModelWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/anatomist/color/wMaterial.h:64: warning: The following parameter of MaterialWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/action/paintaction.h:78: warning: The following parameter of PaintActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
ting docs for file anatomist/window/glcontext.h...
Generating docs for file anatomist/window/glwidget.h...
Generating docs for file anatomist/window/glwidgetmanager.h...
Generating docs for file anatomist/window/qwinblock.h...
Generating docs for file anatomist/window/qwindow.h...
Generating docs for file anatomist/window/qWinFactory.h...
Generating docs for file anatomist/window/viewstate.h...
Generating docs for file anatomist/window/Window.h...
Generating docs for file anatomist/window/winFactory.h...
Generating docs for file anatomist/window3D/agraphicsview_p.h...
Generating docs for file anatomist/window3D/annotedgraph.h...
Generating docs for file anatomist/window3D/boxviewslice.h...
Generating docs for file anatomist/window3D/connmatrixcontrol.h...
Generating docs for file anatomist/window3D/control3D.h...
Generating docs for file anatomist/window3D/cursor.h...
Generating docs for file anatomist/window3D/glwidget3D.h...
Generating docs for file anatomist/window3D/labeleditaction.h...
Generating docs for file anatomist/window3D/orientationAnnotation.h...
Generating docs for file anatomist/window3D/trackball.h...
Generating docs for file anatomist/window3D/trackcut.h...
Generating docs for file anatomist/window3D/trackOblique.h...
Generating docs for file anatomist/window3D/trackObliqueSlice.h...
Generating docs for file anatomist/window3D/transformer.h...
Generating docs for file anatomist/window3D/wFixedPointOfView.h...
Generating docs for file anatomist/window3D/window3D.h...
Generating docs for file anatomist/window3D/window3D_private.h...
Generating docs for file anatomist/window3D/wLightModel.h...
Generating docs for file anatomist/window3D/wTools3D.h...
Generating docs for file anatomist/window3D/zoomDialog.h...
Generating docs for file anatomist/winhisto/histo.h...
Generating docs for file anatomist/winhisto/histoWin.h...
Generating docs for file anatomist/winprof/profFactory.h...
Generating docs for file anatomist/winprof/profStrategy.h...
Generating docs for file anatomist/winprof/profT.h...
Generating docs for file anatomist/winprof/profWin.h...
Generating docs for file anatomist/winprof/profX.h...
Generating docs for file anatomist/winprof/profY.h...
Generating docs for file anatomist/winprof/profZ.h...
Generating page documentation...
Generating docs for page objects_opengl...
Generating group documentation...
Generating class documentation...
Generating docs for compound AimsFileDialog...
Generating docs for compound AimsFileDialogExtension...
Generating docs for compound ALandmarkPicker...
Generating docs for compound APipeReader_Bridge...
Generating docs for compound AttributedChooser...
Generating docs for compound AWindow3D...
Generating docs for nested compound AWindow3D::ObjectModifier...
Generating docs for compound ChooseReferentialWindow...
Generating docs for compound ControlledWindow...
Generating docs for compound ControlSwitch...
Generating docs for compound ControlWindow...
Generating docs for compound ErpWraper...
Generating docs for compound FixedPointOfViewWindow...
Generating docs for compound Fusion2DWindow...
Generating docs for compound Fusion3DWindow...
Generating docs for compound FusionChooser...
Generating docs for compound GLWidgetManager_Private_QObject...
Generating docs for compound Gradient...
Generating docs for compound GradientWidget...
Generating docs for compound GraphLandmarkPicker...
Generating docs for compound KeyRepetitiveEvent...
Generating docs for compound LightModelWindow...
Generating docs for compound listboxeditor...
Generating docs for compound MaterialWindow...
Generating docs for compound MenuCallback...
Generating docs for compound ObjectChooseDialog...
Generating docs for compound ObjectParamSelect...
Generating docs for compound PaintActionView...
Generating docs for compound PreferencesWindow...
Generating docs for compound QAbout...
Generating docs for compound QAColorDialog...
Generating docs for compound QAColorWidget...
Generating docs for compound QAGLWidget...
Generating docs for compound QAGLWidget3D...
Generating docs for compound QAHistogra/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/anatomist/color/qwObjPalette.h:62: warning: The following parameter of QAPaletteWin::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/anatomist/window/qwinblock.h:71: warning: The following parameter of QAWindowBlock::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/graph/qgraphproperties.h:59: warning: The following parameter of QGraphProperties::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/selection/qSelectFactory.h:70: warning: The following parameters of QSelectFactory::handleSelectionMenu(anatomist::AWindow *win, int x, int y, const Tree *specific=0) are not documented:
parameter 'win'
parameter 'x'
parameter 'y'
writing output... [ 71%] pyanatomist_cpp
/casa/host/build/include/anatomist/interface/qwSurfMatch.h:60: warning: The following parameter of QSurfMatchWin::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/object/texturepanel.h:75: warning: The following parameter of QTexturePanel::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/object/texturewin.h:62: warning: The following parameter of QTextureWin::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/color/wRendering.h:67: warning: The following parameter of RenderingWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/action/dynsegmentaction.h:227: warning: The following parameter of RoiDynSegmentActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/action/histoplot.h:55: warning: The following parameter of RoiHistoPlot::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/action/levelsetaction.h:187: warning: The following parameter of RoiLevelSetActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/action/roimanagementaction.h:98: warning: The following parameter of RoiManagementActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/action/morphomath.h:113: warning: The following parameter of RoiMorphoMathActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/gradientwidget/spline.h:62: warning: argument 'ptSize' of command @param is not found in the argument list of Spline::findSegment(QSize gradSize, QPoint ptPos, int &p1, int &p2) const
/casa/host/build/include/anatomist/window3D/wTools3D.h:54: warning: The following parameter of Tools3DWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/surface/wvectorfield.h:62: warning: The following parameter of VectorFieldEditionWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/object/volrenderpanel.h:68: warning: The following parameter of VolRenderPanel::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/color/minipalette.h:67: warning: The following parameter of anatomist::MiniPaletteGraphics::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/color/minipalette.h:248: warning: The following parameter of anatomist::MiniPaletteWidgetEdit::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/color/minipalette.h:283: warning: Unsupported xml/html tag <tab> found
m...
Generating docs for compound QAHistogramWindow...
Generating docs for compound QANumSlider...
Generating docs for compound QAOptionMenuCallback...
Generating docs for compound QAPaletteWin...
Generating docs for compound QAProfileFactory...
Generating docs for compound QAProfileStrategy...
Generating docs for compound QAProfileT...
Generating docs for compound QAProfileWindow...
Generating docs for compound QAProfileX...
Generating docs for compound QAProfileY...
Generating docs for compound QAProfileZ...
Generating docs for compound QAViewToolTip...
Generating docs for compound QAWindow...
Generating docs for compound QAWindowBlock...
Generating docs for compound QAWindowFactory...
Generating docs for nested compound QAWindowFactory::Descrip...
Generating docs for nested compound QAWindowFactory::PixList...
Generating docs for compound QCancelLineEdit...
Generating docs for compound QClickGraphicsView...
Generating docs for compound QGraphParam...
Generating docs for compound QGraphProperties...
Generating docs for compound QImageLabel...
Generating docs for compound QLabelEdit...
Generating docs for compound QObjectBrowser...
Generating docs for compound QObjectBrowserWidget...
Generating docs for nested compound QObjectBrowserWidget::ItemDescr...
Generating docs for compound QObjectTree...
Generating docs for compound QScopeLineEdit...
Generating docs for compound QSelAttrib...
Generating docs for compound QSelectFactory...
Generating docs for compound QSelectMenu...
Generating docs for compound QStringEdit...
Generating docs for compound QSurfMatchWin...
Generating docs for compound QSurfMatchWin_AttEdit...
Generating docs for compound QTexturePanel...
Generating docs for compound QTextureParams...
Generating docs for compound QTextureVectorEditor...
Generating docs for compound QTextureWin...
Generating docs for compound QVectorCompEditor...
Generating docs for compound QWindowTree...
Generating docs for compound ReferentialWindow...
Generating docs for compound ReferentialWindow_TransCallback...
Generating docs for compound RegionsFusionWindow...
Generating docs for compound RenderingWindow...
Generating docs for compound RoiDynSegmentActionView...
Generating docs for compound RoiHistoPlot...
Generating docs for compound RoiLevelSetActionView...
Generating docs for compound RoiManagementActionView...
Generating docs for compound RoiMorphoMathActionView...
Generating docs for compound Spline...
Generating docs for compound ToolBox...
Generating docs for compound Tools3DWindow...
Generating docs for compound VectorFieldEditionWindow...
Generating docs for compound VolRenderPanel...
Generating docs for compound ZoomDialog...
Generating namespace index...
Generating docs for namespace aims
Generating docs for namespace anatomist
Generating docs for compound anatomist::AnatomistInfo...
Generating docs for compound anatomist::Anatomist...
Generating docs for compound anatomist::GlobalConfiguration...
Generating docs for compound anatomist::LocalConfiguration...
Generating docs for compound anatomist::Settings...
Generating docs for compound anatomist::Module...
Generating docs for compound anatomist::ModuleManager...
Generating docs for compound anatomist::ModuleObserver...
Generating docs for compound anatomist::ModuleInterface...
Generating docs for compound anatomist::SyntaxRepository...
Generating docs for compound anatomist::SelectBrowserControl...
Generating docs for compound anatomist::AttDescr...
Generating docs for compound anatomist::Bucket...
Generating docs for compound anatomist::ColorScalarPaletteTraits...
Generating docs for compound anatomist::ColorNoPaletteTraits...
Generating docs for compound anatomist::ColorTraits...
Generating docs for compound anatomist::MiniPaletteGraphics...
Generating docs for compound anatomist::MiniPaletteWidget...
Generating docs for compound anatomist::MiniPaletteWidgetEdit...
Generating docs for compound anatomist::MiniPaletteWidgetTranscient...
Generating docs for compound anatomist::APaletteExtensionAction...
Generating docs for compound anatomist::AObjectPalette...
G/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/commands/cAssignReferential.h:56: warning: argument 'unser' of command @param is not found in the argument list of anatomist::AssignReferentialCommand::AssignReferentialCommand(Referential *ref, const std::set< AObject * > &obj, const std::set< AWindow * > &win, int refId=-1, CommandContext *context=0, const std::string &filename="", const std::string &uuid="")
/casa/host/build/include/anatomist/commands/cAssignReferential.h:66: warning: The following parameters of anatomist::AssignReferentialCommand::AssignReferentialCommand(Referential *ref, const std::set< AObject * > &obj, const std::set< AWindow * > &win, int refId=-1, CommandContext *context=0, const std::string &filename="", const std::string &uuid="") are not documented:
parameter 'context'
parameter 'filename'
parameter 'uuid'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
amespace index...
Generating namespace member index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating graphical class hierarchy...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Running plantuml with JAVA...
Running dot...
lookup cache used 14734/65536 hits=131946 misses=17807
finished...
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
[ 91%] Built target aimsalgo-doxygen
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
enerating docs for compound anatomist::APalette...
Generating docs for compound anatomist::PaletteList...
Generating docs for compound anatomist::PaletteSelectWidget...
Generating docs for compound anatomist::Material...
Generating docs for compound anatomist::Light...
Generating docs for compound anatomist::APaletteWin...
Generating docs for compound anatomist::APaletteWinFactory...
Generating docs for compound anatomist::ActivateActionCommand...
Generating docs for compound anatomist::AddObjectCommand...
Generating docs for compound anatomist::ApplyBuiltinReferentialCommand...
Generating docs for compound anatomist::AskTexExtremaCommand...
Generating docs for compound anatomist::AssignReferentialCommand...
Generating docs for compound anatomist::CameraCommand...
Generating docs for compound anatomist::ChangePaletteCommand...
Generating docs for compound anatomist::ControlsParamsCommand...
Generating docs for compound anatomist::ClosePipeCommand...
Generating docs for compound anatomist::CloseWindowCommand...
Generating docs for compound anatomist::CreateControlWindowCommand...
Generating docs for compound anatomist::CreateWindowCommand...
Generating docs for compound anatomist::CreateWindowsBlockCommand...
Generating docs for compound anatomist::DeleteAllCommand...
Generating docs for compound anatomist::DeleteElementCommand...
Generating docs for compound anatomist::DeleteObjectCommand...
Generating docs for compound anatomist::DuplicateObjectCommand...
Generating docs for compound anatomist::EventFilterCommand...
Generating docs for compound anatomist::ExitCommand...
Generating docs for compound anatomist::ExportTextureCommand...
Generating docs for compound anatomist::ExternalReferenceCommand...
Generating docs for compound anatomist::ExtractTextureCommand...
Generating docs for compound anatomist::Fusion2DParamsCommand...
Generating docs for compound anatomist::Fusion3DParamsCommand...
Generating docs for compound anatomist::FusionInfoCommand...
Generating docs for compound anatomist::FusionObjectsCommand...
Generating docs for compound anatomist::GenerateTextureCommand...
Generating docs for compound anatomist::GetInfoCommand...
Generating docs for compound anatomist::GraphDisplayPropertiesCommand...
Generating docs for compound anatomist::GraphParamsCommand...
Generating docs for compound anatomist::GroupObjectsCommand...
Generating docs for compound anatomist::LinkedCursorCommand...
Generating docs for compound anatomist::LinkWindowsCommand...
Generating docs for compound anatomist::LoadGraphSubObjectsCommand...
Generating docs for compound anatomist::LoadObjectCommand...
Generating docs for compound anatomist::LoadObjectsCommand...
Generating docs for compound anatomist::LoadTransformationCommand...
Generating docs for compound anatomist::LoadTransformationGraphCommand...
Generating docs for compound anatomist::NewIdCommand...
Generating docs for compound anatomist::NewPaletteCommand...
Generating docs for compound anatomist::ObjectInfoCommand...
Generating docs for compound anatomist::OutputCommand...
Generating docs for compound anatomist::PopupPaletteCommand...
Generating docs for compound anatomist::ReloadObjectCommand...
Generating docs for compound anatomist::RemoveObjectCommand...
Generating docs for compound anatomist::SaveObjectCommand...
Generating docs for compound anatomist::SaveTransformationCommand...
Generating docs for compound anatomist::SaveTransformationGraphCommand...
Generating docs for compound anatomist::SelectCommand...
Generating docs for compound anatomist::SelectByHierarchyCommand...
Generating docs for compound anatomist::ServerCommand...
Generating docs for compound anatomist::SetControlCommand...
Generating docs for compound anatomist::SetMaterialCommand...
Generating docs for compound anatomist::SetObjectPaletteCommand...
Generating docs for compound anatomist::ShowObjectCommand...
Generating docs for compound anatomist::SliceParamsCommand...
Generating docs for compound anatomist::TexturingParamsCommand...
Generating docs for compound anatomist::WindowBlockCommand...
Generating d/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/control/controlMenuHandler.h:57: warning: The following parameter of anatomist::AControlMenuHandler::AControlMenuHandler(QMenuBar *menubar, QObject *receiver) is not documented:
parameter 'menubar'
ocs for compound anatomist::WindowConfigCommand...
Generating docs for compound anatomist::AbstractMenuHandler...
Generating docs for compound anatomist::ColoredPixmapCache...
Generating docs for compound anatomist::ControlConfiguration...
Generating docs for compound anatomist::AControlMenuHandler...
Generating docs for compound anatomist::GraphParams...
Generating docs for compound anatomist::QAObjectDrag...
Generating docs for compound anatomist::MapObjectEvent...
Generating docs for compound anatomist::UnmapObjectEvent...
Generating docs for compound anatomist::UpdateControlWindowEvent...
Generating docs for compound anatomist::AWinConfigIO...
Generating docs for compound anatomist::WhatsNew...
Generating docs for compound anatomist::Action...
Generating docs for compound anatomist::ActionDictionary...
Generating docs for nested compound anatomist::ActionDictionary::ActionCreatorBase...
Generating docs for nested compound anatomist::ActionDictionary::ActionCreatorFunc...
Generating docs for compound anatomist::ControlDictionary...
Generating docs for nested compound anatomist::ControlDictionary::ControlCreatorBase...
Generating docs for nested compound anatomist::ControlDictionary::ControlCreatorFunc...
Generating docs for compound anatomist::ControlGroupDictionary...
Generating docs for compound anatomist::IconDictionary...
Generating docs for compound anatomist::ActionPool...
Generating docs for compound anatomist::ControlMapEntry...
Generating docs for compound anatomist::LessControlMap...
Generating docs for compound anatomist::ControlManager...
Generating docs for compound anatomist::Control...
Generating docs for nested compound anatomist::Control::DropActionLink...
Generating docs for nested compound anatomist::Control::DropActionLinkOf...
Generating docs for nested compound anatomist::Control::EnterLeaveActionLink...
Generating docs for nested compound anatomist::Control::EnterLeaveActionLinkOf...
Generating docs for nested compound anatomist::Control::FocusActionLink...
Generating docs for nested compound anatomist::Control::FocusActionLinkOf...
Generating docs for nested compound anatomist::Control::KeyActionLink...
Generating docs for nested compound anatomist::Control::KeyActionLinkOf...
Generating docs for nested compound anatomist::Control::KeyMapKey...
Generating docs for nested compound anatomist::Control::LessKeyMap...
Generating docs for nested compound anatomist::Control::LessMouseMap...
Generating docs for nested compound anatomist::Control::MouseActionLink...
Generating docs for nested compound anatomist::Control::MouseActionLinkOf...
Generating docs for nested compound anatomist::Control::MouseButtonMapKey...
Generating docs for nested compound anatomist::Control::MoveOrDragActionLink...
Generating docs for nested compound anatomist::Control::MoveOrDragActionLinkOf...
Generating docs for nested compound anatomist::Control::PaintActionLink...
Generating docs for nested compound anatomist::Control::PaintActionLinkOf...
Generating docs for nested compound anatomist::Control::PanActionLink...
Generating docs for nested compound anatomist::Control::PanActionLinkOf...
Generating docs for nested compound anatomist::Control::PinchActionLink...
Generating docs for nested compound anatomist::Control::PinchActionLinkOf...
Generating docs for nested compound anatomist::Control::ResizeActionLink...
Generating docs for nested compound anatomist::Control::ResizeActionLinkOf...
Generating docs for nested compound anatomist::Control::SelectionChangedActionLink...
Generating docs for nested compound anatomist::Control::SelectionChangedActionLinkOf...
Generating docs for nested compound anatomist::Control::ShowHideActionLink...
Generating docs for nested compound anatomist::Control::ShowHideActionLinkOf...
Generating docs for nested compound anatomist::Control::SwipeActionLink...
Generating docs for nested compound anatomist::Control::SwipeActionLinkOf...
Generating docs for nested compound anatomist::Control::TapActionLink...
Generating docs for nested compound anatomist::Control::TapActionLinkOf...
Generating do/casa/host/build/include/anatomist/hierarchy/hierarchy.h:83: warning: The following parameter of anatomist::Hierarchy::findMatchingNomenclature(const AObject *obj, const AGraph **ag=0) is not documented:
parameter 'obj'
/casa/host/build/include/anatomist/selection/selectFactory.h:134: warning: The following parameters of anatomist::SelectFactory::handleSelectionMenu(AWindow *win, int x, int y, const Tree *specific=0) are not documented:
parameter 'win'
parameter 'x'
parameter 'y'
/casa/host/build/include/anatomist/observer/Observer.h:66: warning: The following parameter of anatomist::Observer::update(const Observable *observable, void *arg)=0 is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/reference/refobserver.h:70: warning: The following parameter of anatomist::ReferentialObserver::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/surface/glcomponent.h:149: warning: explicit link request to 'texnum' could not be resolved
/casa/host/build/include/anatomist/surface/glcomponent.h:152: warning: explicit link request to 'texnum' could not be resolved
/casa/host/build/include/anatomist/surface/glcomponent.h:324: warning: The following parameters of anatomist::GLComponent::glBuildTexImage(const ViewState &state, unsigned tex, int dimx=-1, int dimy=-1, bool useTexScale=true) const are not documented:
parameter 'state'
parameter 'tex'
parameter 'dimy'
Process2 execution, a: 0.000000, b: blop
/casa/host/build/include/anatomist/surface/planarfusion3d.h:103: warning: The following parameters of anatomist::PlanarFusion3D::glBuildTexImage(const ViewState &state, unsigned tex, int dimx=-1, int dimy=-1, bool useTexScale=true) const are not documented:
parameter 'state'
parameter 'tex'
parameter 'dimy'
/casa/host/build/include/anatomist/surface/texture.h:91: warning: The following parameter of anatomist::ATexture::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
Process2 execution, a: 0.000000, b: yup
/casa/host/build/include/anatomist/surface/shownormalsgui.h:72: warning: The following parameter of anatomist::NormalsSettingsPanel::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
[ 91%] Generating AimsFiberOversampler help file ...
/casa/host/build/include/anatomist/surface/shownormalsgui.h:62: warning: The following parameter of anatomist::NormalsSettingsPanel::NormalsObserver::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
cs for nested compound anatomist::Control::TapAndHoldActionLink...
Generating docs for nested compound anatomist::Control::TapAndHoldActionLinkOf...
Generating docs for nested compound anatomist::Control::TouchActionLink...
Generating docs for nested compound anatomist::Control::TouchActionLinkOf...
Generating docs for nested compound anatomist::Control::WheelActionLink...
Generating docs for nested compound anatomist::Control::WheelActionLinkOf...
Generating docs for compound anatomist::KeyAndMouseLongEvent...
Generating docs for compound anatomist::MouseLongEvent...
Generating docs for compound anatomist::LongActions...
Generating docs for compound anatomist::ControlSwitchObserver...
Generating docs for compound anatomist::View...
Generating docs for compound anatomist::QAWindowDrag...
Generating docs for compound anatomist::QMagnetSlider...
Generating docs for compound anatomist::Hierarchy...
Generating docs for compound anatomist::QSelectWidget...
Generating docs for compound anatomist::WSelectChooser...
Generating docs for compound anatomist::SelectFactory...
Generating docs for nested compound anatomist::SelectFactory::HColor...
Generating docs for compound anatomist::Selector...
Generating docs for compound anatomist::LowestLevelSelector...
Generating docs for compound anatomist::PostSelector...
Generating docs for compound anatomist::Observer...
Generating docs for compound anatomist::Observable...
Generating docs for compound anatomist::ObservableCreatedNotifier...
Generating docs for compound anatomist::Transformation...
Generating docs for compound anatomist::Referential...
Generating docs for compound anatomist::Geometry...
Generating docs for compound anatomist::Referentiable...
Generating docs for compound anatomist::ReferentialObserver...
Generating docs for compound anatomist::ReferencePixmap...
Generating docs for compound anatomist::TransformationObserver...
Generating docs for compound anatomist::ATransformSet...
Generating docs for compound anatomist::RefWindow...
Generating docs for compound anatomist::CutMesh...
Generating docs for compound anatomist::Fusion2DMesh...
Generating docs for compound anatomist::FusionTexSurfMethod...
Generating docs for compound anatomist::GLComponent...
Generating docs for nested compound anatomist::GLComponent::TexExtrema...
Generating docs for nested compound anatomist::GLComponent::TexInfo...
Generating docs for compound anatomist::AGLObject...
Generating docs for compound anatomist::AMTexture...
Generating docs for compound anatomist::PlanarFusion3D...
Generating docs for compound anatomist::ASurface...
Generating docs for compound anatomist::TesselatedMesh...
Generating docs for compound anatomist::ATexSurfaceIterator...
Generating docs for compound anatomist::const_ATexSurfaceIterator...
Generating docs for compound anatomist::ATexSurface...
Generating docs for compound anatomist::TextObject...
Generating docs for compound anatomist::ATexture...
Generating docs for compound anatomist::TransformedObject...
Generating docs for compound anatomist::Shader...
Generating docs for nested compound anatomist::Shader::ColoringModel_...
Generating docs for nested compound anatomist::Shader::InterpolationModel_...
Generating docs for nested compound anatomist::Shader::LightingModel_...
Generating docs for nested compound anatomist::Shader::MaterialModel_...
Generating docs for compound anatomist::ANormalsMesh...
Generating docs for compound anatomist::NormalsFusionMethod...
Generating docs for compound anatomist::NormalsSettingsPanel...
Generating docs for nested compound anatomist::NormalsSettingsPanel::NormalsObserver...
Generating docs for compound anatomist::VectorField...
Generating docs for compound anatomist::AGraphIterator...
Generating docs for compound anatomist::const_AGraphIterator...
Generating docs for compound anatomist::PythonAObject...
Generating docs for compound anatomist::AGraphObject...
Generating docs for compound anatomist::AGraph...
Generating docs for compound anatomist::ObjectActions...
Generating docs for compound anatomist::ClippedObject...
Generat/casa/host/build/include/anatomist/object/oReader.h:86: warning: The following parameter of anatomist::ObjectReader::registerLoader(const std::string &extension, LoadFunctionClass *newFunc) is not documented:
parameter 'extension'
/casa/host/build/include/anatomist/object/Object.h:415: warning: Unsupported xml/html tag <T> found
/casa/host/build/include/anatomist/object/Object.h:449: warning: The following parameter of anatomist::AObject::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/object/sliceable.h:80: warning: The following parameters of anatomist::Sliceable::glBuildTexImage(const ViewState &state, unsigned tex, int dimx=-1, int dimy=-1, bool useTexScale=true) const are not documented:
parameter 'state'
parameter 'tex'
parameter 'dimy'
/casa/host/build/include/anatomist/window/Window.h:224: warning: The following parameter of anatomist::AWindow::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
ing docs for compound anatomist::AObjectLoadEvent...
Generating docs for compound anatomist::ObjectReaderNotifier...
Generating docs for compound anatomist::MObjectIO...
Generating docs for compound anatomist::ObjectMenuCallback...
Generating docs for compound anatomist::ObjectMenuCallbackFunc...
Generating docs for compound anatomist::ObjectMenu...
Generating docs for compound anatomist::ObjectMenuRegistrerClass...
Generating docs for compound anatomist::ObjectMenuRegistrerFuncClass...
Generating docs for compound anatomist::ObjectUtils...
Generating docs for compound anatomist::OptionMatcher...
Generating docs for compound anatomist::ObjectReader...
Generating docs for nested compound anatomist::ObjectReader::LoadFunctionClass...
Generating docs for compound anatomist::AImage...
Generating docs for compound anatomist::AObject...
Generating docs for compound anatomist::ObjectConverter...
Generating docs for compound anatomist::SelfSliceable...
Generating docs for compound anatomist::Sliceable...
Generating docs for compound anatomist::SliceableObject...
Generating docs for compound anatomist::GLCaps...
Generating docs for compound anatomist::GLWidgetManager...
Generating docs for compound anatomist::BlockBorderWidget...
Generating docs for compound anatomist::DraggableWrapper...
Generating docs for compound anatomist::ViewState...
Generating docs for compound anatomist::SliceViewState...
Generating docs for compound anatomist::AWindowCreator...
Generating docs for compound anatomist::AWindowFactory...
Generating docs for compound anatomist::AWindowCreatorFunc...
Generating docs for compound anatomist::AWindow...
Generating docs for compound anatomist::AnnotationAction...
Generating docs for compound anatomist::BoxViewSlice...
Generating docs for compound anatomist::ConnectivityMatrixAction...
Generating docs for compound anatomist::ConnectivityMatrixControl...
Generating docs for compound anatomist::OrientationAnnotation...
Generating docs for compound anatomist::Cursor...
Generating docs for compound anatomist::Control3D...
Generating docs for compound anatomist::Select3DControl...
Generating docs for compound anatomist::FlightControl...
Generating docs for compound anatomist::ObliqueControl...
Generating docs for compound anatomist::TransformControl...
Generating docs for compound anatomist::CutControl...
Generating docs for compound anatomist::WindowActions...
Generating docs for compound anatomist::LinkAction...
Generating docs for compound anatomist::MenuAction...
Generating docs for compound anatomist::SelectAction...
Generating docs for compound anatomist::Zoom3DAction...
Generating docs for compound anatomist::Translate3DAction...
Generating docs for compound anatomist::Sync3DAction...
Generating docs for compound anatomist::MovieAction...
Generating docs for compound anatomist::SliceAction...
Generating docs for compound anatomist::DragObjectAction...
Generating docs for compound anatomist::SortMeshesPolygonsAction...
Generating docs for compound anatomist::ObjectStatAction...
Generating docs for compound anatomist::PinchZoomAction...
Generating docs for compound anatomist::TouchRotateAction...
Generating docs for compound anatomist::LabelEditAction...
Generating docs for compound anatomist::Trackball...
Generating docs for compound anatomist::ContinuousTrackball...
Generating docs for compound anatomist::KeyFlightAction...
Generating docs for compound anatomist::TrackCutAction...
Generating docs for compound anatomist::CutSliceAction...
Generating docs for compound anatomist::TrackOblique...
Generating docs for compound anatomist::TrackObliqueSlice...
Generating docs for compound anatomist::Transformer...
Generating docs for compound anatomist::TranslaterAction...
Generating docs for compound anatomist::PlanarTransformer...
Generating docs for compound anatomist::ResizerAction...
Generating docs for compound anatomist::GLObjectList...
Generating docs for compound anatomist::GLObjectVector...
Generating docs for compound anatomist::GLMObject...
Generating docs for compound anatomist::ObjectVectorIterator...
Gen/casa/host/build/include/anatomist/object/Object.h:415: warning: Unsupported xml/html tag <T> found
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
warning: Inheritance graph for 'anatomist::RegularCommand' not generated, too many nodes (57), threshold is 50. Consider increasing DOT_GRAPH_MAX_NODES.
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Registry.h:80: warning: Found unknown command '\Ref'
/casa/host/build/include/anatomist/processor/Registry.h:60: warning: Found unknown command '\URL'
/casa/host/build/include/anatomist/processor/Registry.h:80: warning: Found unknown command '\Ref'
/casa/host/build/include/anatomist/processor/Registry.h:85: warning: The following parameters of anatomist::Registry::add(const std::string &command, Command::Reader function, const carto::SyntaxSet &syntax) are not documented:
parameter 'function'
parameter 'syntax'
/casa/host/build/include/anatomist/processor/Reader.h:64: warning: The following parameter of anatomist::CommandReader::CommandReader(const std::string &filename, carto::MutexRcPtr< CommandContext > &context) is not documented:
parameter 'context'
/casa/host/build/include/anatomist/constrainteditor/wConstraintEditor.h:61: warning: The following parameter of anatomist::ConstraintEditorWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
erating docs for compound anatomist::const_ObjectVectorIterator...
Generating docs for compound anatomist::ObjectVector...
Generating docs for compound anatomist::BaseIterator...
Generating docs for compound anatomist::AIterator...
Generating docs for compound anatomist::MObject...
Generating docs for compound anatomist::Fusion2D...
Generating docs for compound anatomist::Fusion3D...
Generating docs for compound anatomist::ObjectListIterator...
Generating docs for compound anatomist::const_ObjectListIterator...
Generating docs for compound anatomist::ObjectList...
Generating docs for compound anatomist::Slice...
Generating docs for compound anatomist::AVolumeBase...
Generating docs for compound anatomist::AVolume...
Generating docs for compound anatomist::AVolumeView...
Generating docs for compound anatomist::CommandContext...
Generating docs for compound anatomist::ErrorMessage...
Generating docs for compound anatomist::OutputEvent...
Generating docs for compound anatomist::OutputEventFilter...
Generating docs for compound anatomist::EventHandler...
Generating docs for compound anatomist::APipeReader...
Generating docs for compound anatomist::Unserializer...
Generating docs for compound anatomist::CommandServer...
Generating docs for compound anatomist::Command...
Generating docs for compound anatomist::RegularCommand...
Generating docs for compound anatomist::SerializingCommand...
Generating docs for compound anatomist::WaitCommand...
Generating docs for compound anatomist::Processor...
Generating docs for nested compound anatomist::Processor::Memo...
Generating docs for compound anatomist::Registry...
Generating docs for compound anatomist::CommandReader...
Generating docs for compound anatomist::CommandWriter...
Generating docs for compound anatomist::Serializer...
Generating docs for compound anatomist::Fusion2dMethod...
Generating docs for compound anatomist::Fusion3dMethod...
Generating docs for compound anatomist::PlanarFusion3dMethod...
Generating docs for compound anatomist::FusionTextureMethod...
Generating docs for compound anatomist::FusionMultiTextureMethod...
Generating docs for compound anatomist::FusionCutMeshMethod...
Generating docs for compound anatomist::Fusion2DMeshMethod...
Generating docs for compound anatomist::FusionSliceMethod...
Generating docs for compound anatomist::FusionRGBAVolumeMethod...
Generating docs for compound anatomist::FusionClipMethod...
Generating docs for compound anatomist::FusionTesselationMethod...
Generating docs for compound anatomist::ConnectivityMatrixFusionMethod...
Generating docs for compound anatomist::VectorFieldFusionMethod...
Generating docs for compound anatomist::FusionMethod...
Generating docs for compound anatomist::FusionFactory...
Generating docs for compound anatomist::StdModule...
Generating docs for compound anatomist::AConnectivityMatrix...
Generating docs for compound anatomist::ASparseMatrix...
Generating docs for compound anatomist::GLItem...
Generating docs for compound anatomist::Primitive...
Generating docs for compound anatomist::GLList...
Generating docs for compound anatomist::GLTexture...
Generating docs for compound anatomist::GLItemList...
Generating docs for compound anatomist::GLNoExecItemList...
Generating docs for compound anatomist::ConstraintEditorWindow...
Generating docs for compound anatomist::NodeSelectionAction...
Generating docs for compound anatomist::NodeSelectionControl...
Generating docs for compound anatomist::HierarchyEditor...
Generating docs for compound anatomist::ErpReader...
Generating docs for compound anatomist::AInterpolerMethod...
Generating docs for compound anatomist::AInterpoler...
Generating docs for compound anatomist::ALandmarkFactory...
Generating docs for compound anatomist::PlaneFusionMethod...
Generating docs for compound anatomist::CylinderFusionMethod...
Generating docs for compound anatomist::ASurfMatchMethod...
Generating docs for compound anatomist::ASurfMatcher...
Generating docs for compound anatomist::AnaSurfMatch...
Generating docs for compound anatomist::SurfpaintModule...
Generating docs for co/casa/host/build/include/anatomist/action/levelsetaction.h:64: warning: The following parameter of anatomist::RoiLevelSetActionSharedData::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/action/paintaction.h:124: warning: The following parameters of anatomist::PaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef< AObject * > &volumeOfLabels, const Point3df &vlOffset, aims::BucketMap< Void >::Bucket &deltaModifications, std::list< std::pair< Point3d, ChangesItem > > &changes, const Point3df &voxelSize, bool line, bool replace, bool mm)=0 are not documented:
parameter 'win'
parameter 'transf'
parameter 'point'
parameter 'originalLabel'
parameter 'finalLabel'
parameter 'brushSize'
parameter 'lineMode'
parameter 'volumeOfLabels'
parameter 'deltaModifications'
parameter 'changes'
parameter 'voxelSize'
parameter 'line'
parameter 'replace'
parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:177: warning: The following parameters of anatomist::PointPaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef< AObject * > &volumeOfLabels, const Point3df &vlOffset, aims::BucketMap< Void >::Bucket &deltaModifications, std::list< std::pair< Point3d, ChangesItem > > &changes, const Point3df &voxelSize, bool line, bool replace, bool mm) are not documented:
parameter 'win'
parameter 'transf'
parameter 'point'
parameter 'originalLabel'
parameter 'finalLabel'
parameter 'brushSize'
parameter 'lineMode'
parameter 'volumeOfLabels'
parameter 'deltaModifications'
parameter 'changes'
parameter 'voxelSize'
parameter 'line'
parameter 'replace'
parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:200: warning: The following parameters of anatomist::SquarePaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef< AObject * > &volumeOfLabels, const Point3df &vlOffset, aims::BucketMap< Void >::Bucket &deltaModifications, std::list< std::pair< Point3d, ChangesItem > > &changes, const Point3df &voxelSize, bool line, bool replace, bool mm) are not documented:
parameter 'win'
parameter 'transf'
parameter 'point'
parameter 'originalLabel'
parameter 'finalLabel'
parameter 'brushSize'
parameter 'lineMode'
parameter 'volumeOfLabels'
parameter 'deltaModifications'
parameter 'changes'
parameter 'voxelSize'
parameter 'line'
parameter 'replace'
parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:224: warning: The following parameters of anatomist::DiskPaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef< AObject * > &volumeOfLabels, const Point3df &vlOffset, aims::BucketMap< Void >::Bucket &deltaModifications, std::list< std::pair< Point3d, ChangesItem > > &changes, const Point3df &voxelSize, bool line, bool replace, bool mm) are not documented:
parameter 'win'
parameter 'transf'
parameter 'point'
parameter 'originalLabel'
parameter 'finalLabel'
parameter 'brushSize'
parameter 'lineMode'
parameter 'volumeOfLabels'
parameter 'deltaModifications'
parameter 'changes'
parameter 'voxelSize'
parameter 'line'
parameter 'replace'
parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:259: warning: The following parameters of anatomist::BallPaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef< AObject * > &volumeOfLabels, const Point3df &vlOffset, aims::BucketMap< Void >::Bucket &deltaModifications, std::list< std::pair< Point3d, ChangesItem > > &changes, const Point3df &voxelSize, bool line, bool replace, bool mm) are not documented:
parameter 'win'
parameter 'transf'
parameter 'point'
parameter 'originalLabel'
parameter 'finalLabel'
parameter 'brushSize'
parameter 'lineMode'
parameter 'volumeOfLabels'
parameter 'deltaModifications'
parameter 'changes'
parameter 'voxelSize'
parameter 'line'
parameter 'replace'
parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:296: warning: The following parameter of anatomist::PaintActionSharedData::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/action/roimanagementaction.h:203: warning: The following parameter of anatomist::RoiManagementActionSharedData::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/commands/cGetConnThres.h:58: warning: argument 'ref' of command @param is not found in the argument list of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &requestid, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cGetConnThres.h:58: warning: argument 'obj' of command @param is not found in the argument list of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &requestid, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cGetConnThres.h:58: warning: argument 'refId' of command @param is not found in the argument list of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &requestid, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cGetConnThres.h:58: warning: argument 'unser' of command @param is not found in the argument list of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &requestid, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cGetConnThres.h:68: warning: The following parameters of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &requestid, CommandContext *context=0) are not documented:
parameter 'image'
parameter 'requestid'
parameter 'context'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/commands/cSetConnThres.h:56: warning: argument 'ref' of command @param is not found in the argument list of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cSetConnThres.h:56: warning: argument 'obj' of command @param is not found in the argument list of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cSetConnThres.h:56: warning: argument 'refId' of command @param is not found in the argument list of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cSetConnThres.h:56: warning: argument 'unser' of command @param is not found in the argument list of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cSetConnThres.h:66: warning: The following parameters of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0) are not documented:
parameter 'image'
parameter 'assignLowThreshold'
parameter 'lowThres'
parameter 'assignHighThreshold'
parameter 'highThres'
parameter 'context'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/action/dynsegmentaction.h:65: warning: The following parameter of anatomist::RoiDynSegmentAction::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
mpound anatomist::SurfpaintTools...
Generating docs for compound anatomist::SurfpaintToolsAction...
Generating docs for compound anatomist::SurfpaintToolsControl...
Generating docs for compound anatomist::VolRenderFusionMethod...
Generating docs for compound anatomist::VolRenderShaderFusionMethod...
Generating docs for compound anatomist::VolRenderModule...
Generating docs for compound anatomist::VolRender...
Generating docs for compound anatomist::VolRenderShader...
Generating docs for compound anatomist::ProfileModule...
Generating docs for compound anatomist::RoiLevelSetActionSharedData...
Generating docs for compound anatomist::RoiLevelSetAction...
Generating docs for compound anatomist::RoiLabelNamingAction...
Generating docs for compound anatomist::ChangesItem...
Generating docs for compound anatomist::ChangedBucketsItem...
Generating docs for compound anatomist::RoiChangeProcessor...
Generating docs for compound anatomist::PaintStrategy...
Generating docs for compound anatomist::PointPaintStrategy...
Generating docs for compound anatomist::SquarePaintStrategy...
Generating docs for compound anatomist::DiskPaintStrategy...
Generating docs for compound anatomist::BallPaintStrategy...
Generating docs for compound anatomist::PaintActionSharedData...
Generating docs for compound anatomist::PaintAction...
Generating docs for compound anatomist::RoiBlobSegmentationAction...
Generating docs for compound anatomist::PaintControl...
Generating docs for compound anatomist::RoiLevelSetControl...
Generating docs for compound anatomist::RoiLabelNamingControl...
Generating docs for compound anatomist::RoiManagementActionSharedData...
Generating docs for compound anatomist::RoiManagementAction...
Generating docs for compound anatomist::RoiBaseModule...
Generating docs for compound anatomist::CreateGraphCommand...
Generating docs for compound anatomist::GetConnThresholdCommand...
Generating docs for compound anatomist::SetConnThresholdCommand...
Generating docs for compound anatomist::AddNodeCommand...
Generating docs for compound anatomist::PaintParamsCommand...
Generating docs for compound anatomist::RoiDynSegmentAction...
Generating docs for compound anatomist::RoiMorphoMathAction...
Generating docs for compound anatomist::RoiDynSegmentControl...
Generating docs for compound anatomist::RoiAlgoModule...
Generating docs for compound anatomist::HistogramModule...
Generating docs for namespace anatomist::internal
Generating docs for compound anatomist::internal::ColorTraitsType...
Generating docs for compound anatomist::internal::PaletteWinExtensionActions...
Generating docs for compound anatomist::internal::VectorFieldCoordSpinBox...
Generating docs for compound anatomist::internal::AGraphicsView...
Generating docs for compound anatomist::internal::AGraphicsScene...
Generating docs for compound anatomist::internal::TransformerActionData...
Generating docs for compound anatomist::internal::NoDragSlider...
Generating docs for compound anatomist::internal::CommandReader_Bridge...
Generating docs for namespace carto
Generating docs for compound carto::GLWidget...
Generating docs for namespace Vr
Generating docs for compound Vr::Creator...
Generating docs for compound Vr::CubeZBuffer...
Generating docs for compound Vr::MIPShader...
Generating docs for compound Vr::MPVRShader...
Generating docs for compound Vr::RfmtShader...
Generating docs for compound Vr::Shader...
Generating docs for compound Vr::ShaderFactory...
Generating docs for compound Vr::Slicing...
Generating docs for compound Vr::SumShader...
Generating docs for compound Vr::Vector3d...
Generating docs for compound Vr::VRShader...
Generating docs for compound Vr::VrSingleton...
Generating graph info page...
Generating directory documentation...
Generating dependency graph for directory anatomist/action
Generating dependency graph for directory anatomist
Generating dependency graph for directory anatomist/application
Generating dependency graph for directory anatomist/browser
Generating dependency graph for directory anatomist/bucket
Generating dependency graph for directory a/casa/host/build/include/anatomist/application/anatomist_doc.h:41: warning: image file anatomist.png is not found in IMAGE_PATH: assuming external image.
/casa/host/build/include/anatomist/application/anatomist_doc.h:41: warning: image file anatomist.png is not found in IMAGE_PATH: assuming external image.
writing output... [ 73%] pyanatomist_direct
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:14,816::INFO::Found '0' pipeline(s) in 'deepsulci.sulci_labeling.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:14,816::INFO::Found '3' process(es) in 'deepsulci.sulci_labeling.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:14,816::INFO::Processing pipeline 'deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:14,817::INFO::Processing pipeline 'deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:14,818::INFO::Processing pipeline 'deepsulci.sulci_labeling.capsul.training.SulciDeepTraining'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:14,819::INFO::Writing index at location '/casa/host/src/morphologist/morpho-deepsulci/master/sphinx/process_docs/deepsulci/sulci_labeling/process/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:14,819::INFO::process: '3' files written for module 'sulci_labeling' at location /casa/host/src/morphologist/morpho-deepsulci/master/sphinx/process_docs/deepsulci/sulci_labeling/process.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:14,819::INFO::Writing module 'sulci_labeling' index at location '/casa/host/src/morphologist/morpho-deepsulci/master/sphinx/process_docs/deepsulci/sulci_labeling/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:14,819::INFO::Index: an index has been written for module 'sulci_labeling' at location /casa/host/src/morphologist/morpho-deepsulci/master/sphinx/process_docs/deepsulci/sulci_labeling.
[ 91%] Generating AimsConnectComp help file ...
writing output... [ 76%] pyanatomist_examples
natomist/color
Generating dependency graph for directory anatomist/commands
Generating dependency graph for directory anatomist/constrainteditor
Generating dependency graph for directory anatomist/control
Generating dependency graph for directory anatomist/controler
Generating dependency graph for directory anatomist/erpio
Generating dependency graph for directory anatomist/graph
Generating dependency graph for directory anatomist/hierarchy
Generating dependency graph for directory anatomist/interface
Generating dependency graph for directory anatomist/interpoler
Generating dependency graph for directory anatomist/landmark
Generating dependency graph for directory anatomist/mobject
Generating dependency graph for directory anatomist/module
Generating dependency graph for directory anatomist/object
Generating dependency graph for directory anatomist/processor
Generating dependency graph for directory anatomist/reference
Generating dependency graph for directory anatomist/selection
Generating dependency graph for directory anatomist/sparsematrix
Generating dependency graph for directory anatomist/stdmod
Generating dependency graph for directory anatomist/surface
Generating dependency graph for directory anatomist/surfmatcher
Generating dependency graph for directory anatomist/volume
Generating dependency graph for directory anatomist/window
Generating dependency graph for directory anatomist/window3D
Generating dependency graph for directory anatomist/winhisto
Generating dependency graph for directory anatomist/winprof
Generating index page...
Generating page index...
Generating module index...
Generating namespace index...
Generating namespace member index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating graphical class hierarchy...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Running plantuml with JAVA...
Running dot...
lookup cache used 18506/65536 hits=113143 misses=22562
finished...
[ 91%] Built target anatomist-doxygen
writing output... [ 78%] pyanatomist_headless
writing output... [ 80%] pyanatomist_howto
writing output... [ 83%] pyanatomist_notebook
writing output... [ 85%] pyanatomist_pyaims_tutorial
writing output... [ 88%] pyanatomist_socket
writing output... [ 90%] pyanatomist_threaded
[ 91%] Generating AimsFileConvert help file ...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:16,160::INFO::Pipeline 'morphologist.capsul.morphologist.Morphologist' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.morphologist.Morphologist.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:16,268::INFO::Pipeline 'morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:16,331::INFO::Pipeline 'morphologist.capsul.morphologist.Morphologist' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.morphologist.Morphologist.png'.
writing output... [ 92%] pyanatomist_tutorial
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:16,368::INFO::Pipeline 'morphologist.capsul.spmnormalization.SPMNormalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMNormalization.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:16,368::INFO::Summary: '15' files written for module 'capsul'.
Process2 execution, a: 0.000000, b: blop
writing output... [ 95%] pyanatomist_tutorial_nb
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:16,420::INFO::Pipeline 'morphologist.capsul.axon.normalization.Normalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalization.Normalization.png'.
[ 91%] Generating AimsFileInfo help file ...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:16,529::INFO::Pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.brainorientation.BrainOrientation.png'.
writing output... [ 42%] pyaims_api_aimsalgo
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:16,628::INFO::Pipeline 'morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:16,710::INFO::Pipeline 'morphologist.capsul.fslnormalization.FSLnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:16,802::INFO::Pipeline 'morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.png'.
reading sources... [100%] python_bv_tools
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:16,894::INFO::Pipeline 'morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:16,924::INFO::Pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:16,977::INFO::Pipeline 'morphologist.capsul.axon.corticalfoldsgraphupgradefromold.CorticalFoldsGraphUpgradeFromOld' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.corticalfoldsgraphupgradefromold.CorticalFoldsGraphUpgradeFromOld.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:16,986::INFO::Found '15' pipeline(s) in 'morphologist.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:16,986::INFO::Found '44' process(es) in 'morphologist.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:16,986::INFO::Processing pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist'...
writing output... [ 97%] pyanatomist_wip
/casa/host/build/python/brainvisa/data/neuroDiskItems.py:docstring of brainvisa.data.neuroDiskItems.DiskItem.setResolutionLevel:7: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/data/databaseCheck.py:docstring of brainvisa.data.databaseCheck.T1MriConverter:5: WARNING: Bullet list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/data/databaseCheck.py:docstring of brainvisa.data.databaseCheck.T1MriConverter:10: ERROR: Unexpected indentation.
/casa/host/build/python/brainvisa/data/qt4gui/history.py:docstring of brainvisa.data.qt4gui.history.DataHistoryWindow.show_log:5: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/data/qt4gui/readdiskitemGUI.py:docstring of brainvisa.data.qt4gui.readdiskitemGUI.ComboBoxAction.triggered:1: WARNING: Inline emphasis start-string without end-string.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DiskItemConversionInfo:13: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DiskItemConversionInfo.converter:5: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DiskItemConversionInfo.distance:7: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DiskItemConversionInfo.distance:17: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DiskItemConversionInfo.exactDestTypeConverter:5: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DiskItemConversionInfo.exists:6: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DiskItemConversionInfo.exists:17: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DistributedProcess:1: WARNING: duplicate object description of brainvisa.processes.DistributedProcess, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DistributedProcess.initialization:1: WARNING: duplicate object description of brainvisa.processes.DistributedProcess.initialization, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DistributedProcess.pipelineStructure:1: WARNING: duplicate object description of brainvisa.processes.DistributedProcess.pipelineStructure, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.UserInterruption:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.UserInterruption, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.UserInterruptionStep:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.UserInterruptionStep, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.ask:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.ask, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.checkInterruption:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.checkInterruption, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.dialog:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.dialog, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.error:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.error, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.getConverter:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.getConverter, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.getProgressInfo:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.getProgressInfo, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.log:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.log, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.progress:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.progress, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.pythonSystem:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.pythonSystem, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.runInteractiveProcess:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.runInteractiveProcess, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.runProcess:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.runProcess, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.showException:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.showException, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.showProgress:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.showProgress, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.system:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.system, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.temporary:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.temporary, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.warning:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.warning, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.write:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.write, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.addChild:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.addChild, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.addDoubleLink:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.addDoubleLink, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.addExecutionDependencies:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.addExecutionDependencies, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.addLink:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.addLink, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.allParameterFiles:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.allParameterFiles, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.child:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.child, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.children:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.children, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.childrenNames:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.childrenNames, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.gui:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.gui, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.hasChildren:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.hasChildren, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.isSelected:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.isSelected, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.name:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.name, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.parameterized:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.parameterized, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.parent_node:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.parent_node, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.parent_pipeline:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.parent_pipeline, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.parseParameterString:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.parseParameterString, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.removeChild:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.removeChild, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.removeDoubleLink:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.removeDoubleLink, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.removeLink:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.removeLink, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.run:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.run, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.setNodeHidden:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.setNodeHidden, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.setSelected:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.setSelected, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.IterationProcess:1: WARNING: duplicate object description of brainvisa.processes.IterationProcess, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.IterationProcess.initialization:1: WARNING: duplicate object description of brainvisa.processes.IterationProcess.initialization, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.IterationProcess.pipelineStructure:1: WARNING: duplicate object description of brainvisa.processes.IterationProcess.pipelineStructure, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ListOfIterationProcess:1: WARNING: duplicate object description of brainvisa.processes.ListOfIterationProcess, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ParallelExecutionNode:1: WARNING: duplicate object description of brainvisa.processes.ParallelExecutionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Parameterized:1: WARNING: duplicate object description of brainvisa.processes.Parameterized, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Parameterized:10: WARNING: duplicate object description of brainvisa.processes.Parameterized.signature, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Parameterized:14: WARNING: duplicate object description of brainvisa.processes.Parameterized.signatureChangeNotifier, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Parameterized.linkParameters:31: WARNING: Definition list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process:1: WARNING: duplicate object description of brainvisa.processes.Process, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process:8: WARNING: duplicate object description of brainvisa.processes.Process.signature, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process:12: WARNING: duplicate object description of brainvisa.processes.Process.category, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process:16: WARNING: duplicate object description of brainvisa.processes.Process.userLevel, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process:21: WARNING: duplicate object description of brainvisa.processes.Process.showMaximized, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.id:1: WARNING: duplicate object description of brainvisa.processes.Process.id, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.validation:1: WARNING: duplicate object description of brainvisa.processes.Process.validation, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.execution:1: WARNING: duplicate object description of brainvisa.processes.Process.execution, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.executionNode:1: WARNING: duplicate object description of brainvisa.processes.Process.executionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.setExecutionNode:1: WARNING: duplicate object description of brainvisa.processes.Process.setExecutionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.getAllParameters:1: WARNING: duplicate object description of brainvisa.processes.Process.getAllParameters, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.allProcesses:1: WARNING: duplicate object description of brainvisa.processes.Process.allProcesses, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.pipelineStructure:1: WARNING: duplicate object description of brainvisa.processes.Process.pipelineStructure, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.sourceFile:1: WARNING: duplicate object description of brainvisa.processes.Process.sourceFile, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.sourcePath:1: WARNING: duplicate object description of brainvisa.processes.Process.sourcePath, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.inlineGUI:1: WARNING: duplicate object description of brainvisa.processes.Process.inlineGUI, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process._iterate:1: WARNING: duplicate object description of brainvisa.processes.Process._iterate, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process._copy:1: WARNING: duplicate object description of brainvisa.processes.Process._copy, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.allProcesses:1: WARNING: duplicate object description of brainvisa.processes.Process.allProcesses, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.execution:1: WARNING: duplicate object description of brainvisa.processes.Process.execution, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.executionNode:1: WARNING: duplicate object description of brainvisa.processes.Process.executionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.getAllParameters:1: WARNING: duplicate object description of brainvisa.processes.Process.getAllParameters, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.id:1: WARNING: duplicate object description of brainvisa.processes.Process.id, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.inlineGUI:1: WARNING: duplicate object description of brainvisa.processes.Process.inlineGUI, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.pipelineStructure:1: WARNING: duplicate object description of brainvisa.processes.Process.pipelineStructure, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.setExecutionNode:1: WARNING: duplicate object description of brainvisa.processes.Process.setExecutionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.sourceFile:1: WARNING: duplicate object description of brainvisa.processes.Process.sourceFile, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.sourcePath:1: WARNING: duplicate object description of brainvisa.processes.Process.sourcePath, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.validation:1: WARNING: duplicate object description of brainvisa.processes.Process.validation, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessExecutionNode:1: WARNING: duplicate object description of brainvisa.processes.ProcessExecutionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessExecutionNode.addChild:1: WARNING: duplicate object description of brainvisa.processes.ProcessExecutionNode.addChild, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessExecutionNode.addExecutionDependencies:1: WARNING: duplicate object description of brainvisa.processes.ProcessExecutionNode.addExecutionDependencies, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessExecutionNode.child:1: WARNING: duplicate object description of brainvisa.processes.ProcessExecutionNode.child, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessExecutionNode.children:1: WARNING: duplicate object description of brainvisa.processes.ProcessExecutionNode.children, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessExecutionNode.childrenNames:1: WARNING: duplicate object description of brainvisa.processes.ProcessExecutionNode.childrenNames, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessExecutionNode.gui:1: WARNING: duplicate object description of brainvisa.processes.ProcessExecutionNode.gui, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessExecutionNode.processReloaded:1: WARNING: duplicate object description of brainvisa.processes.ProcessExecutionNode.processReloaded, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:1: WARNING: duplicate object description of brainvisa.processes.ProcessInfo, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:3: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.id, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:7: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.name, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:11: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.signature, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:15: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.userLevel, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:19: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.category, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:23: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.showMaximized, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:27: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.fileName, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:31: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.roles, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:35: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.valid, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:39: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.procdoc, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:43: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.toolbox, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:47: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.module, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo.html:1: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.html, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessSet.accept:5: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessSet.accept:14: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessSet.processes:5: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessSet.processes:8: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessSet.source:2: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.Branch:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.Branch, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.Branch.setVisible:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.Branch.setVisible, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.Branch.update:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.Branch.update, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.Leaf:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.Leaf, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.Leaf.setVisible:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.Leaf.setVisible, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.Leaf.update:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.Leaf.update, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.addDir:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.addDir, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.setEditable:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.setEditable, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.setName:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.setName, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.setVisible:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.setVisible, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.update:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.update, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.updateName:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.updateName, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTrees:1: WARNING: duplicate object description of brainvisa.processes.ProcessTrees, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTrees:11: WARNING: duplicate object description of brainvisa.processes.ProcessTrees.name, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTrees:15: WARNING: duplicate object description of brainvisa.processes.ProcessTrees.userProcessTreeMinfFile, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTrees:20: WARNING: duplicate object description of brainvisa.processes.ProcessTrees.selectedTree, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTrees.add:1: WARNING: duplicate object description of brainvisa.processes.ProcessTrees.add, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTrees.load:1: WARNING: duplicate object description of brainvisa.processes.ProcessTrees.load, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTrees.save:1: WARNING: duplicate object description of brainvisa.processes.ProcessTrees.save, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTrees.update:1: WARNING: duplicate object description of brainvisa.processes.ProcessTrees.update, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SelectionExecutionNode:1: WARNING: duplicate object description of brainvisa.processes.SelectionExecutionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SelectionExecutionNode.addChild:1: WARNING: duplicate object description of brainvisa.processes.SelectionExecutionNode.addChild, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SelectionExecutionNode.addExecutionDependencies:1: WARNING: duplicate object description of brainvisa.processes.SelectionExecutionNode.addExecutionDependencies, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SelectionExecutionNode.childSelectionChange:1: WARNING: duplicate object description of brainvisa.processes.SelectionExecutionNode.childSelectionChange, other instance in python_bv_processing, use :noindex: for one of them
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/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SelectionProcess.initialization:1: WARNING: duplicate object description of brainvisa.processes.SelectionProcess.initialization, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SelectionProcess.pipelineStructure:1: WARNING: duplicate object description of brainvisa.processes.SelectionProcess.pipelineStructure, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SerialExecutionNode:1: WARNING: duplicate object description of brainvisa.processes.SerialExecutionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SerialExecutionNode.addChild:1: WARNING: duplicate object description of brainvisa.processes.SerialExecutionNode.addChild, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SerialExecutionNode.removeChild:1: WARNING: duplicate object description of brainvisa.processes.SerialExecutionNode.removeChild, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.addProcessInfo:1: WARNING: duplicate object description of brainvisa.processes.addProcessInfo, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.allProcessesInfo:1: WARNING: duplicate object description of brainvisa.processes.allProcessesInfo, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.allProcessesTree:1: WARNING: duplicate object description of brainvisa.processes.allProcessesTree, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.cleanupProcesses:1: WARNING: duplicate object description of brainvisa.processes.cleanupProcesses, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.convertSpecialLinks:8: WARNING: Inline emphasis start-string without end-string.
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/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getConversionInfo:6: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getConverter:1: WARNING: duplicate object description of brainvisa.processes.getConverter, other instance in python_bv_processing, use :noindex: for one of them
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/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.readProcess:1: WARNING: duplicate object description of brainvisa.processes.readProcess, other instance in python_bv_processing, use :noindex: for one of them
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build succeeded, 4 warnings.
The HTML pages are in ../../../share/doc/pyanatomist-5.2/sphinx.
PyAnatomist Module present
PythonLauncher::runModules()
done
checking consistency... /casa/host/src/axon/master/sphinxdoc/dev_doc/python_bv_configuration.rst: WARNING: document isn't included in any toctree
/casa/host/src/axon/master/sphinxdoc/dev_doc/python_bv_tools.rst: WARNING: document isn't included in any toctree
done
preparing documents... done
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:17,566::INFO::Pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.png'.
writing output... [ 25%] index
writing output... [ 33%] python
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:17,656::INFO::Pipeline 'morphologist.capsul.axon.sulcilabelling.SulciLabelling' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabelling.SulciLabelling.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:17,713::INFO::Pipeline 'morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM.png'.
writing output... [ 41%] python_bv_configuration
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:17,762::INFO::Pipeline 'morphologist.capsul.fslnormalization.FSLNormalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLNormalization.png'.
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:17,847::INFO::Pipeline 'morphologist.capsul.spmnormalization.SPMNormalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMNormalization.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:17,937::INFO::Pipeline 'morphologist.capsul.spmnormalization.SPMnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:17,937::INFO::Summary: '15' files written for module 'capsul'.
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[ 91%] Generating AimsGraphComplete help file ...
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[ 91%] Built target anatomist-gpl-sphinx
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:18,520::INFO::Found '15' pipeline(s) in 'morphologist.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:18,520::INFO::Found '44' process(es) in 'morphologist.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:18,520::INFO::Processing pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist'...
writing output... [ 78%] pyaims_modules_api
[ 91%] Generating AimsGraphConvert help file ...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 05:54:19,132::INFO::Found '0' pipeline(s) in 'deepsulci.pattern_classification.capsul'.
writing output... [ 85%] pyaims_tutorial
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:19,419::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:19,424::INFO::Processing pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:19,475::INFO::Processing pipeline 'morphologist.capsul.axon.corticalfoldsgraphupgradefromold.CorticalFoldsGraphUpgradeFromOld'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:19,482::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:19,490::INFO::Processing pipeline 'morphologist.capsul.axon.normalization.Normalization'...
writing output... [ 75%] python_bv_processing_gui
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:19,529::INFO::Processing pipeline 'morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:19,577::INFO::Processing pipeline 'morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline'...
writing output... [ 83%] python_bv_tools
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:19,588::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabelling.SulciLabelling'...
writing output... [ 91%] usecases
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:19,610::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:19,621::INFO::Processing pipeline 'morphologist.capsul.fslnormalization.FSLNormalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:19,629::INFO::Processing pipeline 'morphologist.capsul.fslnormalization.FSLnormalizationPipeline'...
writing output... [100%] usecases_nb
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:19,636::INFO::Processing pipeline 'morphologist.capsul.morphologist.Morphologist'...
[ 91%] Generating AimsGraphExtractTransformation help file ...
generating indices... genindex py-modindex done
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dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 197 warnings.
The HTML pages are in ../../share/doc/axon-5.2/dev_doc.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,370::INFO::Processing pipeline 'morphologist.capsul.spmnormalization.SPMNormalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,382::INFO::Processing pipeline 'morphologist.capsul.spmnormalization.SPMnormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,392::INFO::Writing index at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,393::INFO::pipeline: '15' files written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/pipeline.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,393::INFO::Processing pipeline 'morphologist.capsul.axon.acpcorientation.AcpcOrientation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,394::INFO::Processing pipeline 'morphologist.capsul.axon.aimsconverter.AimsConverter'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,394::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationtoaims.BaladinNormalizationToAims'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,395::INFO::Processing pipeline 'morphologist.capsul.axon.brainsegmentation.BrainSegmentation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,396::INFO::Processing pipeline 'morphologist.capsul.axon.brainvolumes.brainvolumes'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,397::INFO::Processing pipeline 'morphologist.capsul.axon.corticalfoldsgraphthickness.CorticalFoldsGraphThickness'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,397::INFO::Processing pipeline 'morphologist.capsul.axon.foldgraphupgradestructure.foldgraphupgradestructure'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,398::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationtoaims.FSLnormalizationToAims'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,398::INFO::Processing pipeline 'morphologist.capsul.axon.greywhiteclassificationhemi.GreyWhiteClassificationHemi'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,399::INFO::Processing pipeline 'morphologist.capsul.axon.greywhitemesh.GreyWhiteMesh'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,400::INFO::Processing pipeline 'morphologist.capsul.axon.greywhitetopology.GreyWhiteTopology'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,400::INFO::Processing pipeline 'morphologist.capsul.axon.histoanalysis.HistoAnalysis'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,401::INFO::Processing pipeline 'morphologist.capsul.axon.importt1mri.ImportT1MRI'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,401::INFO::Processing pipeline 'morphologist.capsul.axon.morpho_report.morpho_report'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,402::INFO::Processing pipeline 'morphologist.capsul.axon.morphologistprocess.morphologistProcess'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,406::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_aimsmiregister.normalization_aimsmiregister'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,407::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_baladin.Normalization_Baladin'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,408::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_fsl_reinit.Normalization_FSL_reinit'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,408::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_spm_reinit.Normalization_SPM_reinit'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,410::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_t1_spm12_reinit.normalization_t1_spm12_reinit'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,412::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_t1_spm8_reinit.normalization_t1_spm8_reinit'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,413::INFO::Processing pipeline 'morphologist.capsul.axon.pialmesh.PialMesh'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,415::INFO::Processing pipeline 'morphologist.capsul.axon.reorientanatomy.ReorientAnatomy'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,416::INFO::Processing pipeline 'morphologist.capsul.axon.scalpmesh.ScalpMesh'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,418::INFO::Processing pipeline 'morphologist.capsul.axon.skullstripping.skullstripping'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,419::INFO::Processing pipeline 'morphologist.capsul.axon.splitbrain.SplitBrain'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,422::INFO::Processing pipeline 'morphologist.capsul.axon.spmsn3dtoaims.SPMsn3dToAims'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,423::INFO::Processing pipeline 'morphologist.capsul.axon.sulcigraph.SulciGraph'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,425::INFO::Processing pipeline 'morphologist.capsul.axon.sulcigraphmorphometrybysubject.sulcigraphmorphometrybysubject'...
[ 91%] Generating AimsGraphMerge help file ...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,426::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingann.SulciLabellingANN'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,427::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamglobal.SulciLabellingSPAMGlobal'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,428::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamlocal.SulciLabellingSPAMLocal'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,430::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,431::INFO::Processing pipeline 'morphologist.capsul.axon.sulciskeleton.SulciSkeleton'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,432::INFO::Processing pipeline 'morphologist.capsul.axon.sulcivoronoi.sulcivoronoi'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,433::INFO::Processing pipeline 'morphologist.capsul.axon.t1biascorrection.T1BiasCorrection'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,435::INFO::Processing pipeline 'morphologist.capsul.axon.talairachtransformation.TalairachTransformation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,435::INFO::Processing pipeline 'morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,436::INFO::Processing pipeline 'morphologist.capsul.import_t1_mri.ImportT1Mri'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,437::INFO::Processing pipeline 'morphologist.capsul.morpho_intersubject_status.MorphoInterSubjectStatus'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,438::INFO::Processing pipeline 'morphologist.capsul.morphologist_simple.MorphologistSimple'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,443::INFO::Processing pipeline 'morphologist.capsul.morphologist_viewer.MorphologistView'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,444::INFO::Processing pipeline 'morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,444::INFO::Processing pipeline 'morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,445::INFO::Writing index at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/process/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,445::INFO::process: '44' files written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/process.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,445::INFO::Writing module 'capsul' index at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,446::INFO::Index: an index has been written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul.
writing output... [100%] volume_orientation
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,966::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:20,972::INFO::Processing pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:21,024::INFO::Processing pipeline 'morphologist.capsul.axon.corticalfoldsgraphupgradefromold.CorticalFoldsGraphUpgradeFromOld'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:21,031::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:21,039::INFO::Processing pipeline 'morphologist.capsul.axon.normalization.Normalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:21,075::INFO::Processing pipeline 'morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped'...
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.doit:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.doit:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.ref:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.setRef:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.ref:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.setRef:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.ref:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.setRef:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.ref:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.setRef:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.ref:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.setRef:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.ref:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.setRef:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.ref:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.setRef:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.ref:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.setRef:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_DOUBLE.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_DOUBLE.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_FLOAT.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_HSV.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_POINT3DF.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGB.reset:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGB.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGBA.reset:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGBA.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S16.reset:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S16.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S32.reset:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S32.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U16.reset:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U16.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U32.reset:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U32.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U8.reset:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U8.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.doit:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.doit:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.ref:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.setRef:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.ref:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.setRef:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.ref:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.setRef:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.ref:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.setRef:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.ref:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.setRef:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.ref:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.setRef:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.ref:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.setRef:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.ref:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.Transformation3d, soma.aims.soma.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.setRef:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_DOUBLE.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_DOUBLE.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_FLOAT.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_HSV.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_POINT3DF.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGB.reset:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGB.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGBA.reset:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGBA.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S16.reset:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
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/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U16.reset:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U16.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U32.reset:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U32.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U8.reset:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U8.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aims/lazy_read_data.py:docstring of soma.aims.lazy_read_data.LazyReadData:1: WARNING: more than one target found for cross-reference 'AllocatorContext': soma.aims.carto.AllocatorContext, soma.aims.carto.carto.AllocatorContext
/casa/host/build/python/soma/aimsalgo/lazy_resample_volume.py:docstring of soma.aimsalgo.lazy_resample_volume.LazyResampleVolume:1: WARNING: more than one target found for cross-reference 'aims.AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/sulci/graph_pointcloud.py:docstring of soma.aimsalgo.sulci.graph_pointcloud.build_split_graph:1: WARNING: more than one target found for cross-reference 'aims.Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/sulci/graph_pointcloud.py:docstring of soma.aimsalgo.sulci.graph_pointcloud.build_split_graph:1: WARNING: more than one target found for cross-reference 'aims.Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
generating indices... /casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:21,122::INFO::Processing pipeline 'morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline'...
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generating CAPSUL processes docs...
['/usr/bin/python3.10', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'morphologist.capsul', '-o', '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist', '--schema']
loading pickled environment... /casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:21,155::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM'...
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genindex [ 91%] Generating AimsInvertTransformation help file ...
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build succeeded, 351 warnings.
The HTML pages are in ../../../../share/doc/pyaims-5.2/sphinx.
[autosummary] generating autosummary for: index.rst, process_docs/morphologist/capsul/index.rst, process_docs/morphologist/capsul/pipeline/index.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.corticalfoldsgraphupgradefromold.CorticalFoldsGraphUpgradeFromOld.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.rst, ..., process_docs/morphologist/capsul/process/morphologist.capsul.axon.t1biascorrection.T1BiasCorrection.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformation.TalairachTransformation.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst, process_docs/morphologist/capsul/process/morphologist.capsul.import_t1_mri.ImportT1Mri.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morpho_intersubject_status.MorphoInterSubjectStatus.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_simple.MorphologistSimple.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_viewer.MorphologistView.rst, process_docs/morphologist/capsul/process/morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel.rst, process_docs/morphologist/capsul/process/morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst, sulpated.rst
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:21,925::INFO::pipeline: '15' files written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline.
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['/usr/bin/python3.10', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'morphologist.capsul', '-o', '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist', '--schema']
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/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst:30: WARNING: duplicate label morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_inputs, other instance in /casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst
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/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst:70: WARNING: duplicate label morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_outputs, other instance in /casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst
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/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/index.rst:118: WARNING: Citation [PERROT2009] is not referenced.
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/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/index.rst:139: WARNING: Citation [VAROQUAUX2010] is not referenced.
done
preparing documents... [autosummary] generating autosummary for: index.rst, process_docs/morphologist/capsul/index.rst, process_docs/morphologist/capsul/pipeline/index.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.corticalfoldsgraphupgradefromold.CorticalFoldsGraphUpgradeFromOld.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.rst, ..., process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcivoronoi.sulcivoronoi.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.t1biascorrection.T1BiasCorrection.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformation.TalairachTransformation.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst, process_docs/morphologist/capsul/process/morphologist.capsul.import_t1_mri.ImportT1Mri.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morpho_intersubject_status.MorphoInterSubjectStatus.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_simple.MorphologistSimple.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_viewer.MorphologistView.rst, process_docs/morphologist/capsul/process/morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel.rst, process_docs/morphologist/capsul/process/morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst
done
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:23,709::INFO::Processing pipeline 'deepsulci.pattern_classification.capsul.resnet_labeling.PatternDeepLabeling'...
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:23,711::INFO::Processing pipeline 'deepsulci.pattern_classification.capsul.snipe_training.PatternSnipeTraining'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:23,711::INFO::Processing pipeline 'deepsulci.pattern_classification.capsul.svm_labeling.PatternSVMLabeling'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:23,712::INFO::Processing pipeline 'deepsulci.pattern_classification.capsul.svm_training.PatternSVMTraining'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:23,713::INFO::Writing index at location '/casa/host/src/morphologist/morpho-deepsulci/master/sphinx/process_docs/deepsulci/pattern_classification/process/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 05:54:23,713::INFO::process: '6' files written for module 'pattern_classification' at location /casa/host/src/morphologist/morpho-deepsulci/master/sphinx/process_docs/deepsulci/pattern_classification/process.
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['/usr/bin/python3.10', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'deepsulci.sulci_labeling.capsul', '-o', '/casa/host/src/morphologist/morpho-deepsulci/master/sphinx/process_docs/deepsulci', '--schema']
['/usr/bin/python3.10', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'deepsulci.pattern_classification.capsul', '-o', '/casa/host/src/morphologist/morpho-deepsulci/master/sphinx/process_docs/deepsulci', '--schema']
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/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst:66: WARNING: duplicate label morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_outputs, other instance in /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst:30: WARNING: duplicate label morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_inputs, other instance in /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst:70: WARNING: duplicate label morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_outputs, other instance in /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst:30: WARNING: duplicate label morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_inputs, other instance in /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst:66: WARNING: duplicate label morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_outputs, other instance in /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst:30: WARNING: duplicate label morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_inputs, other instance in /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst:70: WARNING: duplicate label morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_outputs, other instance in /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst
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[autosummary] generating autosummary for: api.rst, index.rst, process_docs/deepsulci/pattern_classification/index.rst, process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_labeling.PatternDeepLabeling.rst, process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_training.PatternDeepTraining.rst, process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_labeling.PatternSnipeLabeling.rst, process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_training.PatternSnipeTraining.rst, process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.svm_labeling.PatternSVMLabeling.rst, process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.svm_training.PatternSVMTraining.rst, process_docs/deepsulci/pattern_classification/process/index.rst, process_docs/deepsulci/sulci_labeling/index.rst, process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation.rst, process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling.rst, process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.training.SulciDeepTraining.rst, process_docs/deepsulci/sulci_labeling/process/index.rst
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/casa/host/src/capsul/master/capsul/pipeline/pipeline_nodes.py:docstring of capsul.pipeline.pipeline_nodes.ProcessNode.check_requirements:6: ERROR: Unknown directive type "see".
.. see:: :meth:`capsul.process.process.check_requirements`
/casa/host/src/capsul/master/capsul/pipeline/pipeline_nodes.py:docstring of capsul.pipeline.pipeline_nodes.ProcessNode.get_plug_value:1: WARNING: duplicate object description of capsul.pipeline.pipeline_nodes.ProcessNode.get_plug_value, other instance in api/pipeline, use :noindex: for one of them
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/casa/host/src/capsul/master/capsul/pipeline/pipeline_nodes.py:docstring of capsul.pipeline.pipeline_nodes.ProcessNode.set_callback_on_plug:1: WARNING: duplicate object description of capsul.pipeline.pipeline_nodes.ProcessNode.set_callback_on_plug, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/pipeline/pipeline_nodes.py:docstring of capsul.pipeline.pipeline_nodes.ProcessNode.set_plug_value:1: WARNING: duplicate object description of capsul.pipeline.pipeline_nodes.ProcessNode.set_plug_value, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/pipeline/pipeline_tools.py:docstring of capsul.pipeline.pipeline_tools.write_fake_pipeline:8: ERROR: Unknown interpreted text role "warning".
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/casa/host/src/capsul/master/capsul/pipeline/topological_sort.py:docstring of capsul.pipeline.topological_sort.GraphNode.add_link_from:1: WARNING: duplicate object description of capsul.pipeline.topological_sort.GraphNode.add_link_from, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/pipeline/topological_sort.py:docstring of capsul.pipeline.topological_sort.GraphNode.add_link_to:1: WARNING: duplicate object description of capsul.pipeline.topological_sort.GraphNode.add_link_to, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/pipeline/topological_sort.py:docstring of capsul.pipeline.topological_sort.GraphNode.remove_link_from:1: WARNING: duplicate object description of capsul.pipeline.topological_sort.GraphNode.remove_link_from, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/pipeline/topological_sort.py:docstring of capsul.pipeline.topological_sort.GraphNode.remove_link_to:1: WARNING: duplicate object description of capsul.pipeline.topological_sort.GraphNode.remove_link_to, other instance in api/pipeline, use :noindex: for one of them
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/casa/host/src/capsul/master/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.add_embedded_subpipeline:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.add_embedded_subpipeline, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.auto_dot_node_positions:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.auto_dot_node_positions, other instance in api/qt_gui, use :noindex: for one of them
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/casa/host/src/capsul/master/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.is_logical_view:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.is_logical_view, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.link_right_clicked:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.link_right_clicked, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.node_clicked:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.node_clicked, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.node_clicked_ctrl:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.node_clicked_ctrl, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.node_right_clicked:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.node_right_clicked, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.onLoadSubPipelineClicked:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.onLoadSubPipelineClicked, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.onOpenProcessController:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.onOpenProcessController, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.plug_clicked:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.plug_clicked, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.plug_right_clicked:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.plug_right_clicked, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.reset_initial_nodes_positions:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.reset_initial_nodes_positions, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.save_dot_image_ui:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.save_dot_image_ui, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.scene:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.scene, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.set_logical_view:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.set_logical_view, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/master/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.set_pipeline:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.set_pipeline, other instance in api/qt_gui, use :noindex: for one of them
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[ 95%] Generating bioRenumberConnectComp help file ...
[ 95%] Generating bioStatDominanceAppli help file ...
[ 95%] Generating bioVoxelFeatures help file ...
[ 95%] Generating AimsAdaptiveGaussianSmoothing help file ...
[ 95%] Generating AimsEdgeExtract help file ...
[ 95%] Generating AimsExtremaMap help file ...
[ 95%] Generating AimsRegionGrowingExtrema help file ...
[ 95%] Generating AimsSigmaImageCalculate help file ...
[ 95%] Generating bioVoxelWiseStatistics help file ...
[ 95%] Generating AimsSegmentationEM help file ...
[ 95%] Generating AimsSelectGradPoints help file ...
[ 95%] Generating AimsRegisterQNEstimate help file ...
[ 95%] Generating bioKMeans help file ...
[ 95%] Generating constelBundlesFiltering help file ...
[ 95%] Generating AimsSparseMatrixSmoothing help file ...
[ 95%] Generating constelConnectionDensityTexture help file ...
[ 95%] Generating constelConnectivityMatrix help file ...
[ 95%] Generating constelFibersLengths help file ...
[ 95%] Generating constelMeanConnectivityProfileFromMatrix help file ...
[ 95%] Generating constelSelectBundlesFromNames help file ...
[ 95%] Generating constelSelectFibersFromMesh help file ...
[ 95%] Generating AimsConstraintCleaner help file ...
[ 95%] Generating AimsGyriStuff help file ...
[ 95%] Generating AimsFlattenCortex help file ...
[ 95%] Generating AimsParameterizeGyri help file ...
[ 95%] Generating AimsParameterizeSulcus help file ...
[ 95%] Generating AimsPlotOnSPhericalAtlas help file ...
[ 95%] Generating AimsSulcusCorticalSnake help file ...
[ 95%] Generating AimsTextureToAtlas help file ...
[ 95%] Generating surfTexActivationSimulation help file ...
[ 95%] Generating surfStructuralAnalysis help file ...
[ 95%] Generating AimsCheck2DCoordinates help file ...
[ 95%] Generating AimsMeshToAtlas help file ...
[ 95%] Generating AimsSulcusNormalizeDepthProfile help file ...
[ 95%] Generating AimsConformalMapping help file ...
[ 95%] Generating AimsMeshCoordinatesToDecimated help file ...
[ 95%] Generating AimsExtractGyrus help file ...
[ 95%] Generating AimsMeshToMeshPoint help file ...
[ 95%] Generating AimsPlotCoordinatesOnMesh help file ...
[ 95%] Generating PlotFociForValidation help file ...
[ 95%] Generating AimsCoordinatesToIndex help file ...
[ 95%] Generating AimsGyriRegularization help file ...
[ 95%] Generating AimsGroupGyri help file ...
[ 95%] Generating AimsGeodesicPath help file ...
[ 95%] Generating AimsInterpolateVolumeToSurface help file ...
[100%] Generating AimsSulcalLines help file ...
[100%] Generating AimsTextureCompare help file ...
[100%] Generating AimsExactDepthArea help file ...
[100%] Generating AimsCoordinatesToTexture help file ...
[100%] Generating AimsCoordinatesTextureToMesh help file ...
[100%] Generating AimsCoordinateGridMesh help file ...
[100%] Generating AimsMeshMedianSurface help file ...
[100%] Generating AimsFunctionProjection help file ...
[100%] Generating AimsCorticalThickness help file ...
[100%] Generating AimsMeshIsoLine help file ...
[100%] Generating AimsCorticalReferential help file ...
[100%] Generating documentation commands help index ...
[100%] Built target bv_commands_doc
[100%] Create "share/doc/2.6"
[100%] Built target capsul-devdoc
[100%] Built target devdoc
[100%] Built target capsul-doc
Generating BrainVISA processes documentation
[100%] Built target bv_ontology_doc
[100%] Built target bv_doc_index
[100%] Built target axon-doc
[100%] Built target doc
bv_maker summary:
OK step doc: /casa/host/build, started: 2025/11/19 05:54, stopped: 2025/11/19 05:56
All went good.
Finished: SUCCESS
![[Jenkins]](/builds/static/478a8f5f/images/svgs/logo.svg){kind=logo}
