Started
Running as brainvisa
----------------------------------------
$ /usr/bin/python3 /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/brainvisa-cmake/bin/bv_run_pixi_env.py bv_maker name=soma-env-0.0 -- sources
----------------------------------------


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/aims-free
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/aims-gpl
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/anatomist-free
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/anatomist-gpl
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/axon
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/bioprocessing
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/brainrat-gpl
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/brainrat-private
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/brainvisa-cmake
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.
$ pre-commit install
pre-commit installed at .git/hooks/pre-commit


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/brainvisa-cmake
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.
$ pre-commit install
pre-commit installed at .git/hooks/pre-commit


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/brainvisa-share
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
Depuis https://github.com/brainvisa/brainvisa-share
 ! [rejeté]          6.0.13     -> 6.0.13  (écraserait l'étiquette existante)
 ! [rejeté]          6.0.14     -> 6.0.14  (écraserait l'étiquette existante)
 ! [rejeté]          v5.0.0     -> v5.0.0  (écraserait l'étiquette existante)
 ! [rejeté]          v5.0.1     -> v5.0.1  (écraserait l'étiquette existante)
 ! [rejeté]          v5.0.2     -> v5.0.2  (écraserait l'étiquette existante)
 ! [rejeté]          v5.0.3     -> v5.0.3  (écraserait l'étiquette existante)
 ! [rejeté]          v5.0.4     -> v5.0.4  (écraserait l'étiquette existante)
 ! [rejeté]          v5.1.0     -> v5.1.0  (écraserait l'étiquette existante)
 ! [rejeté]          v5.1.1     -> v5.1.1  (écraserait l'étiquette existante)
 ! [rejeté]          v5.1.2     -> v5.1.2  (écraserait l'étiquette existante)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Fetching failed. Please check your Internet connection and access rights
to the origin repository.
========================================================================


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/brainvisa-spm
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/brainvisa_freesurfer
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/capsul
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.
$ pre-commit install
pre-commit installed at .git/hooks/pre-commit


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/constellation-gpl
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/constellation-nonfree
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/cortical_surface-gpl
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/cortical_surface-nonfree
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/disco
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.
$ pre-commit install
pre-commit installed at .git/hooks/pre-commit


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/highres-cortex
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.
$ pre-commit install
pre-commit installed at .git/hooks/pre-commit


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/morpho-deepsulci
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/morphologist-baby
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/morphologist-gpl
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/morphologist-nonfree
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/morphologist-ui
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/nuclear_imaging-gpl
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/nuclear_imaging-nonfree
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/populse-db
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.
$ pre-commit install
pre-commit installed at .git/hooks/pre-commit


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/primatologist-gpl
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/soma-base
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.
$ pre-commit install
pre-commit installed at .git/hooks/pre-commit


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/soma-io
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/soma-workflow
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.
$ pre-commit install
pre-commit installed at .git/hooks/pre-commit


Updating git repository /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/sulci-nonfree
$ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*'
$ git update-ref --no-deref refs/bv_head refs/remotes/origin/master
$ git -c remote.origin.skipDefaultUpdate remote update
$ git merge --ff-only refs/bv_head
Déjà à jour.

Summary of Git repositories in /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src
========================================================================================
┌───── * uncommitted working tree changes
│┌──── + uncommitted index changes
││┌─── $ stash present
│││┌── % untracked files
││││ ┌ HEAD
││││ │                 ┌ update status
││││ │                 │              ┌ bv_maker upstream state
││││ │                 │              │       ┌ Git upstream state
││││ │                 │              │       │┌ Directory
     master (229d7e8d) ✓              U=       aims-free
     master (bd28573)  ✓              U=       aims-gpl
     master (a7b87c19) ✓              U=       anatomist-free
     master (055a588)  ✓              U=       anatomist-gpl
     master (5213d8cc) ✓              U=       axon
     master (3a5ba4d)  ✓              U=       bioprocessing
     master (67b8d33)  ✓              U=       brainrat-gpl
     master (6a5058d)  ✓              U=       brainrat-private
     master (72ef5c2)  ✓              U=       brainvisa-cmake
     master (72ef5c2)  ✓              U=       brainvisa-cmake
     master (7d96df0)  ✗ fetch failed U+40-44  brainvisa-share
     master (d2087b5)  ✓              U=       brainvisa-spm
     master (1574c5b)  ✓              U=       brainvisa_freesurfer
     master (98232acb) ✓              U=       capsul
     master (110934b)  ✓              U=       constellation-gpl
     master (77484c7)  ✓              U=       constellation-nonfree
     master (50af02f)  ✓              U=       cortical_surface-gpl
     master (f607afc)  ✓              U=       cortical_surface-nonfree
     master (3d2a8d0)  ✓              U=       disco
     master (1bb4c84)  ✓              U=       highres-cortex
     master (87673b9)  ✓              U=       morpho-deepsulci
     master (5dcfbd3)  ✓              U=       morphologist-baby
     master (dcf5113b) ✓              U=       morphologist-gpl
     master (12c73e8)  ✓              U=       morphologist-nonfree
     master (1a2e186)  ✓              U=       morphologist-ui
   % master (24016734) ✓              U=       nuclear_imaging-gpl
     master (86cd122)  ✓              U=       nuclear_imaging-nonfree
     master (74153c0)  ✓              U=       populse-db
     master (705fda1)  ✓              U=       primatologist-gpl
     master (5ae5773)  ✓              U=       soma-base
     master (a983555)  ✓              U=       soma-io
     master (fb22b4e)  ✓              U=       soma-workflow
     master (e13410a)  ✓              U=       sulci-nonfree
Traceback (most recent call last):
  File "/home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/brainvisa-cmake/python/brainvisa_cmake/commands.py", line 92, in process
    logs = getattr(o, method)(*meth_args,
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/brainvisa-cmake/python/brainvisa_cmake/sources.py", line 441, in process
    raise RuntimeError("Error updating one or more Git repositories")
RuntimeError: Error updating one or more Git repositories

bv_maker summary:
FAILED      step sources: /home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src, started: 2026/04/04 03:47, stopped: 2026/04/04 03:47
There were errors.
Traceback (most recent call last):
  File "/home_local/a-sac-ns-brainvisa/bbi-daily/soma-env-0.0/src/brainvisa-cmake/bin/bv_run_pixi_env.py", line 75, in <module>
    subprocess.check_call(cmd, cwd=wd, env=env)
  File "/usr/lib/python3.12/subprocess.py", line 413, in check_call
    raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['pixi', 'run', '--frozen', 'bv_maker', 'sources']' returned non-zero exit status 1.

Finished: FAILURE