Console Output

Skipping 8,973 KB.. Full Log
-- Up-to-date: /casa/host/install/python/morphologist/core/tests/test_runner.py
-- Up-to-date: /casa/host/install/python/morphologist/core/tests/test_runner_find_failed_jobs.py
-- Up-to-date: /casa/host/install/python/morphologist/core/tests/test_runner_on_failed_study.py
-- Up-to-date: /casa/host/install/python/morphologist/core/tests/test_study.py
-- Up-to-date: /casa/host/install/python/morphologist/core/tests/test_subject.py
-- Up-to-date: /casa/host/install/python/morphologist/core/utils/__init__.py
-- Up-to-date: /casa/host/install/python/morphologist/core/utils/design_patterns.py
-- Up-to-date: /casa/host/install/python/morphologist/gui/__init__.py
-- Up-to-date: /casa/host/install/python/morphologist/gui/main_window.py
-- Up-to-date: /casa/host/install/python/morphologist/gui/viewport_widget.py
-- Up-to-date: /casa/host/install/python/morphologist/info.py
-- Up-to-date: /casa/host/install/python/morphologist/intra_analysis/__init__.py
-- Up-to-date: /casa/host/install/python/morphologist/intra_analysis/commands/__init__.py
-- Up-to-date: /casa/host/install/python/morphologist/intra_analysis/commands/morphometry-concat.py
-- Up-to-date: /casa/host/install/python/morphologist/intra_analysis/commands/morphometry.py
-- Up-to-date: /casa/host/install/python/morphologist/intra_analysis/constants.py
-- Up-to-date: /casa/host/install/python/morphologist/intra_analysis/parameters.py
-- Up-to-date: /casa/host/install/python/morphologist/intra_analysis/steps.py
-- Up-to-date: /casa/host/install/python/morphologist/intra_analysis/study.py
-- Up-to-date: /casa/host/install/python/morphologist/tests/gui/__init__.py
-- Up-to-date: /casa/host/install/python/morphologist/tests/gui/test_main_window.py
-- Up-to-date: /casa/host/install/python/morphologist/tests/gui/test_study_editor_widget.py
-- Up-to-date: /casa/host/install/python/morphologist/tests/intra_analysis/__init__.py
-- Up-to-date: /casa/host/install/python/morphologist/tests/intra_analysis/analysis.py
-- Up-to-date: /casa/host/install/python/morphologist/tests/intra_analysis/mocks/__init__.py
-- Up-to-date: /casa/host/install/python/morphologist/tests/intra_analysis/mocks/analysis.py
-- Up-to-date: /casa/host/install/python/morphologist/tests/intra_analysis/mocks/steps.py
-- Up-to-date: /casa/host/install/python/morphologist/tests/intra_analysis/study.py
-- Up-to-date: /casa/host/install/python/morphologist/tests/intra_analysis/test_analysis.py
-- Up-to-date: /casa/host/install/python/morphologist/tests/intra_analysis/test_runner.py
-- Up-to-date: /casa/host/install/python/morphologist/tests/intra_analysis/test_runner_mock_analysis.py
-- Up-to-date: /casa/host/install/python/morphologist/tests/intra_analysis/test_study.py
-- Up-to-date: /casa/host/install/python/morphologist/tests/scripts/run_long.py
-- Up-to-date: /casa/host/install/python/morphologist/tests/scripts/run_mid_long.py
-- Up-to-date: /casa/host/install/python/morphologist/tests/scripts/run_short.py
-- Up-to-date: /casa/host/install/python/morphologist/tests/utils/__init__.py
-- Up-to-date: /casa/host/install/python/morphologist/core/gui/ui/import_subjects_widget.ui
-- Up-to-date: /casa/host/install/python/morphologist/core/gui/ui/rql_subjects_widget.ui
-- Up-to-date: /casa/host/install/python/morphologist/core/gui/ui/runner_settings_widget.ui
-- Up-to-date: /casa/host/install/python/morphologist/core/gui/ui/runner_widget.ui
-- Up-to-date: /casa/host/install/python/morphologist/core/gui/ui/select_organized_directory.ui
-- Up-to-date: /casa/host/install/python/morphologist/core/gui/ui/study_editor_widget.ui
-- Up-to-date: /casa/host/install/python/morphologist/core/gui/ui/subjects_widget.ui
-- Up-to-date: /casa/host/install/python/morphologist/core/gui/ui/viewport_view.ui
-- Up-to-date: /casa/host/install/python/morphologist/core/settings.configspec
-- Up-to-date: /casa/host/install/python/morphologist/gui/ui/main_window.ui
Built target install-morphologist-ui
Built target install-deepsulci-models
Built target morpho-deepsulci_target_3
-- Install configuration: "Release"
-- Install component: "morpho-deepsulci"
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/morphologist/processes/Sulci/Recognition/sulci_deep_labeling.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/morphologist/processes/Sulci/Recognition/sulci_deep_training.py
-- Up-to-date: /casa/host/install/python/deepsulci/__init__.py
-- Up-to-date: /casa/host/install/python/deepsulci/deeptools/__init__.py
-- Up-to-date: /casa/host/install/python/deepsulci/deeptools/dataset.py
-- Up-to-date: /casa/host/install/python/deepsulci/deeptools/early_stopping.py
-- Up-to-date: /casa/host/install/python/deepsulci/deeptools/models.py
-- Up-to-date: /casa/host/install/python/deepsulci/patchtools/__init__.py
-- Up-to-date: /casa/host/install/python/deepsulci/patchtools/optimized_patchmatch.py
-- Up-to-date: /casa/host/install/python/deepsulci/pattern_classification/__init__.py
-- Up-to-date: /casa/host/install/python/deepsulci/pattern_classification/analyse/__init__.py
-- Up-to-date: /casa/host/install/python/deepsulci/pattern_classification/analyse/stats.py
-- Up-to-date: /casa/host/install/python/deepsulci/pattern_classification/capsul/__init__.py
-- Up-to-date: /casa/host/install/python/deepsulci/pattern_classification/capsul/resnet_labeling.py
-- Up-to-date: /casa/host/install/python/deepsulci/pattern_classification/capsul/resnet_training.py
-- Up-to-date: /casa/host/install/python/deepsulci/pattern_classification/capsul/snipe_labeling.py
-- Up-to-date: /casa/host/install/python/deepsulci/pattern_classification/capsul/snipe_training.py
-- Up-to-date: /casa/host/install/python/deepsulci/pattern_classification/capsul/svm_labeling.py
-- Up-to-date: /casa/host/install/python/deepsulci/pattern_classification/capsul/svm_training.py
-- Up-to-date: /casa/host/install/python/deepsulci/pattern_classification/method/__init__.py
-- Up-to-date: /casa/host/install/python/deepsulci/pattern_classification/method/resnet.py
-- Up-to-date: /casa/host/install/python/deepsulci/pattern_classification/method/snipe.py
-- Up-to-date: /casa/host/install/python/deepsulci/pattern_classification/method/svm.py
-- Up-to-date: /casa/host/install/python/deepsulci/sulci_labeling/__init__.py
-- Up-to-date: /casa/host/install/python/deepsulci/sulci_labeling/analyse/__init__.py
-- Up-to-date: /casa/host/install/python/deepsulci/sulci_labeling/analyse/stats.py
-- Up-to-date: /casa/host/install/python/deepsulci/sulci_labeling/capsul/__init__.py
-- Up-to-date: /casa/host/install/python/deepsulci/sulci_labeling/capsul/error_computation.py
-- Up-to-date: /casa/host/install/python/deepsulci/sulci_labeling/capsul/labeling.py
-- Up-to-date: /casa/host/install/python/deepsulci/sulci_labeling/capsul/training.py
-- Up-to-date: /casa/host/install/python/deepsulci/sulci_labeling/method/__init__.py
-- Up-to-date: /casa/host/install/python/deepsulci/sulci_labeling/method/cutting.py
-- Up-to-date: /casa/host/install/python/deepsulci/sulci_labeling/method/unet.py
Built target install-morpho-deepsulci
Built target brainrat-gpl_target_3
-- Install configuration: "Release"
-- Install component: "brainrat-gpl"
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/brainrat.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/2d-3dpmi/HistologicalPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/2d-3dpmi/IndividualizingAndStackingMultipleSlices.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/2d-3dpmi/InterVolumesSliceCoregistration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/2d-3dpmi/InterVolumesSliceCoregistrationParallel.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/2d-3dpmi/IntraVolumePropagativeSliceRegistration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/2d-3dpmi/IntraVolumePropagativeSliceRegistrationParallel.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/2d-3dpmi/MultipleHistologicalPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/2d-3dpmi/StackingIndividualSlices.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/Histological3dAnalysisPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/agregatesegmentation/SegmentationModelClassSelection.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/agregatesegmentation/SegmentationModelClassification.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/agregatesegmentation/SegmentationModelLearning.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/agregatesegmentation/SegmentationModelVisualization.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/photoreference/BlockFacePhotographyPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/photoreference/Calibration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/pmianalysis/GreyLevelConversionToActivity.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/pmianalysis/MultipleVolume3DHierarchicalStatisticGeneration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/pmianalysis/Volume3DHierarchicalStatisticGeneration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/pmianalysis/VolumeHeatMapGeneration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/pmianalysis/VolumeROIAnalysis.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/ASFMorpho.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/AxialInterleavedVolumeExtraction.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/AxialSliceDeletion.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/AxialSliceReplacement.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/AxialSlicesPermutation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/BorderGeneration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/ConnectedComponentExtraction.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/FeatureExtraction.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/FlipApplication.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/FlipApplicationOnASlice.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/FovAdaptation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/GradientGeneration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/IntensityVolumeNormalization.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/InteractiveSubvolumeExtraction.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/MaskApplication.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/MaskGeneration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/RenameImageSeries.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/Stacking.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/SubvolumeStacking.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/registration/BMTransformationEstimation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/registration/FFDRegistrationPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/registration/FFDTransformationEstimation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/registration/LinearRegistrationPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/registration/LinearTransformationApplication.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/registration/MITransformationEstimation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/registration/RegistrationPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/registration/RegistrationPipeline_v2.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/registration/TransformationApplication.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/types/brainrat.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/brainrat.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/brainrat.png
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/2d-3dpmi/IndividualizingAndStackingMultipleSlices.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/2d-3dpmi/InterVolumesSliceCoregistration.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/2d-3dpmi/IntraVolumePropagativeSliceRegistration.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/2d-3dpmi/StackingIndividualSlices.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/2d-3dpmi/category_documentation.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/category_documentation.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/pmianalysis/GreyLevelConversionToActivity.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/pmianalysis/VolumeROIAnalysis.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/pmianalysis/category_documentation.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/AxialInterleavedVolumeExtraction.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/AxialSliceDeletion.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/AxialSliceReplacement.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/AxialSlicesPermutation.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/FlipApplication.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/FlipApplicationOnASlice.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/IntensityVolumeNormalization.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/InteractiveSubvolumeExtraction.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/RenameImageSeries.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/SubvolumeStacking.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/brainrat/processes/toolbox/category_documentation.minf
-- Up-to-date: /casa/host/install/python/brainrat/__init__.py
-- Up-to-date: /casa/host/install/python/brainrat/api.py
-- Up-to-date: /casa/host/install/python/brainrat/deeplearning/__init__.py
-- Up-to-date: /casa/host/install/python/brainrat/deeplearning/__main__.py
-- Up-to-date: /casa/host/install/python/brainrat/imaging/__init__.py
-- Up-to-date: /casa/host/install/python/brainrat/imaging/__main__.py
-- Up-to-date: /casa/host/install/python/brainrat/info.py
-- Up-to-date: /casa/host/install/python/brainrat/iosupport.py
-- Up-to-date: /casa/host/install/python/brainrat/mpisupport.py
-- Up-to-date: /casa/host/install/python/brainrat/tests/__init__.py
-- Up-to-date: /casa/host/install/python/brainrat/tests/brainvisa/__init__.py
-- Up-to-date: /casa/host/install/python/brainrat/tests/brainvisa/test_brainrat.py
-- Up-to-date: /casa/host/install/python/brainrat/tiling.py
-- Up-to-date: /casa/host/install/python/brainrat/uicheck.py
-- Up-to-date: /casa/host/install/python/brainrat/uihelpers.py
-- Up-to-date: /casa/host/install/python/brainrat/utils/__init__.py
-- Up-to-date: /casa/host/install/python/brainrat/utils/path.py
-- Up-to-date: /casa/host/install/python/brainrat/utils/soma_workflow.py
Built target install-brainrat-gpl
Built target brainrat-private_target_4
Built target brainrat-private_target_2
-- Install configuration: "Release"
-- Install component: "brainrat-private"
-- Up-to-date: /casa/host/install/python/brainrat/config.py
-- Up-to-date: /casa/host/install/lib/libbrainrat.so.5.2.0
-- Up-to-date: /casa/host/install/lib/libbrainrat.so
-- Up-to-date: /casa/host/install/lib/libbiodpy.so.5.2.0
-- Up-to-date: /casa/host/install/lib/libbiodpy.so
-- Up-to-date: /casa/host/install/bin/AimsReadDpy
-- Up-to-date: /casa/host/install/bin/bioReadDpy
-- Up-to-date: /casa/host/install/bin/AimsAdaptiveSelVoxel
-- Up-to-date: /casa/host/install/bin/AimsAxialProjection
-- Up-to-date: /casa/host/install/bin/AimsBorderGenerate
-- Up-to-date: /casa/host/install/bin/AimsBorderInfo
-- Up-to-date: /casa/host/install/bin/AimsCenterSlices
-- Up-to-date: /casa/host/install/bin/AimsFeaturesExtraction
-- Up-to-date: /casa/host/install/bin/AimsFovAdapt
-- Up-to-date: /casa/host/install/bin/AimsGL2Activity
-- Up-to-date: /casa/host/install/bin/AimsIndividStackSlices
-- Up-to-date: /casa/host/install/bin/AimsInterSliceNormalize
-- Up-to-date: /casa/host/install/bin/AimsManualRegistration
-- Up-to-date: /casa/host/install/bin/AimsMidPlaneAlign
-- Up-to-date: /casa/host/install/bin/bioDetectSlices
-- Up-to-date: /casa/host/install/bin/bioModelClassify
-- Up-to-date: /casa/host/install/bin/bioModelGenerate
Built target install-brainrat-private
Built target bioprocessing_target_7
Built target bioprocessing_target_1
Built target bioprocessing_target_5
-- Install configuration: "Release"
-- Install component: "bioprocessing"
-- Up-to-date: /casa/host/install/python/bioprocessing/info.py
-- Up-to-date: /casa/host/install/python/bioprocessing/config.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/bioprocessing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/hierarchies/brainvisa-3.0/biology.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/hierarchies/brainvisa-3.1.0/biology.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/hierarchies/brainvisa-3.2.0/biology.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/import/ImportScan.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/platform/MIRCen/analysis/HierarchicalRoiFeatures.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/platform/MIRCen/mri-processing/BrukerSequencePreprocess.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/platform/MIRCen/mri-processing/VarianSequencePreprocess.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/platform/MIRCen/registration/ApplyTransformationInReferential.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/platform/MIRCen/registration/MRIPETRegistration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/2d-3dpmi/3DHistoProcess.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/2d-3dpmi/IndividualizingSlices.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/agregatesegmentation/bioAggregateDiceCartography.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/agregatesegmentation/bioGenerateDiceCartography.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/agregatesegmentation/bioModelTestParameters.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/agregatesegmentation/obsolete_components/ApplyFastMarching.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/agregatesegmentation/obsolete_components/FastMarching_AP_Segmentation2D.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/agregatesegmentation/obsolete_components/FastMarching_AP_Segmentation3D.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/digitalatlas/DigitalAtlasHierarchyApply.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/digitalatlas/DigitalAtlasHierarchyGenerate.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/digitalatlas/DigitalAtlasPreparePipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/digitalatlas/PETScanAtlasAnalysis.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/digitalatlas/obsolete_components/DigitalAtlasRegistrationOnVolume.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/digitalatlas/obsolete_components/DigitalAtlasRegistrationOnVolumeParallel.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/digitalatlas/obsolete_components/NonLinearVolumeRegistration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/photoreference/PhotoPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/photoreference/PhotographicVolumePreprocessing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/photoreference/RGBComponentsIntensityNormalization.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/photoreference/obsolete_components/PixelSizeCalibration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/photoreference/obsolete_components/StackingPhotographs.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/pmianalysis/GenerateROIAnalysisFiles.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/pmianalysis/ROISymetrizationAnd3DAnalysis.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/pmianalysis/TemplateGenerationPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/pmianalysis/TemplateRegistrationPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/astrocytes/AstrocyteThresholdSegmentation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/clearmap/ClearMapConvert.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/clearmap/ClearMapResampling.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/clearmap/ElastixRegistration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/clearmap/ElastixTransformationEstimation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/color_normalization/SPCN-01-model_estimation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/color_normalization/SPCN-02-model_application.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/color_normalization/SPCN.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/color_normalization/color_normalization_GAN.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/color_normalization/define_discriminator.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/color_normalization/define_generator.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/color_normalization/patch_assembling.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/color_normalization/patch_generation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/color_normalization/training_GAN.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/nsa/ImportScans.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/nsa/MultiBrainVolumeToIndividualVolume.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/nsa/RGB_roi_fill.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/nsa/SeriesConverter.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/nsa/VolumePreprocess.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/segmentation/DLSegmentationModelInference.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/segmentation/DLSegmentationPostProcessing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/segmentation/DLSegmentationPostProcessingParallel.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/segmentation/DLSegmentationPrepareData.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/segmentation/FeaturesMapProcessing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/segmentation/FeaturesProcessingParallel.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/wip/cttimeseriesregistration/CTTimeSeriesFfdRegistration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/wip/cttimeseriesregistration/CTTimeSeriesPreprocessing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/wip/cttimeseriesregistration/CTTimeSeriesReconstruction.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/wip/cttimeseriesregistration/CTTimeSeriesRegistration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/ApplyFFDOnLabel.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/ApplyMask.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/ColorCombinator.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/DiceOnMasks.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/DicesTableGenerator.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/FFDonKnotGridChange.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/FFDonKnotGridChangeBatch.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/FFDonKnotGridMove.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/FFDonKnotGridMoveBatch.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/FFDvsColorCombination.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/FFDvsColorCombinationBatch.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/FFDvsMedianSubsampling.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/FFDvsMedianSubsamplingBatch.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/FFDvsSplSeg.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/FFDvsSplSegBatch.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/LabelExtraction.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/MedianSubSampling.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/TransformationCompose.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/TransformationsEvaluation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/TransformationsEvaluationBatch.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/FFD-validation/VolumeResampling.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/MultipleRegistrationPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/ParallelRegistration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/ReferenceRegistrationPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/antsApplyTransforms.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/antsRegistrationSimplified.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/obsolete_components/3DFFDTransformationApplication.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/registration/obsolete_components/3DFFDTransformationEstimation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/AxialSliceListReplacement.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/BoundingBoxTransformationApplication.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/ComputeBoundingBoxFromBinary.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/ComputeBoundingBoxFromLabel.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/CorrectShiftStack.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/CorrelationProcessing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/CropListOfImage.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/ExtractComponentsInOrder.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/ExtractList.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/ExtractSubListOfImage.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/FovPreprocessing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/GaussianSmoothing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/GaussianSmoothingPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/GreyLevelReplacement.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/GridGeneration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/IndividualizeLabeledImage.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/InterhemisphericPlaneCorrection.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/KMeansStack.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/ListSubSampling.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/MeanVolumeGeneration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/MorphologicalOperatorsApplication.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/MorphologicalReconstruction.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/MultipleChannelVolumePreprocessing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/OutlineGeneration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/ParallelIndividualizeLabeledImage.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/PostProcessingPhotos.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/RGBVolumeCreation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/ROIGraphMeshRendering.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/Smoothing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/Unstacking.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/VolumeInterlace.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/VolumeResizing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/VolumeStackSlices.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/VolumeUnstack.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/atlas/GraphMergeLabels.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/atlas/download_allen_atlas.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicClosing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicConnectComp.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicFlip.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicLinearComb.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicMask.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicOpening.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicReplaceLevel.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicResample.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicSmoothing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicSubSampling.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicSubVolume.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicThreshold.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/Multiple/MultipleOpening.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/Parallel/ParallelConnectComp.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/Parallel/ParallelFlip.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/Parallel/ParallelLinearComb.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/Parallel/ParallelMask.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/Parallel/ParallelReplaceLevel.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/Parallel/ParallelSmoothing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/Parallel/ParallelSubSampling.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/Parallel/ParallelThreshold.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/Parallel/ParallelVolumeConvert.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/Parallel/ParallelVolumeSplit.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Bio/BasicBinaryBoundingBox.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Bio/BasicBlockMatching.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Bio/BasicBoundingBoxCalculation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Bio/BasicInterSliceNormalize.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Bio/BasicMacGetSingleBrain.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/datasets/CellPoseConversion.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_Logit.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_SVM.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_evaluation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_fast_modeling.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_generate_thumbnails.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_nearest_neighbors.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_optimal_threshold.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_random_forest_pipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_segmentation_pipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_toolbox/class_selection/ml_evaluation_select.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_toolbox/ml_Adaboost_CV.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_toolbox/ml_Logit_select.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_toolbox/ml_PCA_visu.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_toolbox/ml_RandomForest.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_toolbox/ml_RandomForest_CV.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_toolbox/ml_biovision_validation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_toolbox/ml_classify.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_toolbox/ml_dictionary_learn.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_toolbox/ml_factorial_design.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_toolbox/ml_features_extract.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_toolbox/ml_multi_images_features_extract.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_toolbox/ml_parallel_classify.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_toolbox/ml_parallel_features_extract.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_toolbox/ml_random_forest_CV_pipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_toolbox/ml_reshape.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/machine_learning/ml_toolbox/ml_weighting_random_forest.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/microscopy/BoundingBoxCziGeneration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/microscopy/BoundingBoxDrawing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/microscopy/BoundingBoxGenerationPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/microscopy/BoundingBoxHistologicalDetection.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/microscopy/BoundingBoxHistologicalSpatialReorganization.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/microscopy/BoundingBoxManualGeneration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/microscopy/BoundingBoxMerging.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/microscopy/MultipleBoundingBoxManualGeneration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/microscopy/SimpleRoiEditor.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/microscopy/SubvolumeExtraction.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/obsolete_components/GenerateBorder.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/obsolete_components/GenerateMask.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/resample.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/voxelwise_statistics/permutations_test.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/voxelwise_statistics/voxelwise_t-test.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/voxelwise_statistics/vw_toolbox/adaptive-filter.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/voxelwise_statistics/vw_toolbox/cluster_detection.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/voxelwise_statistics/vw_toolbox/compute_Tstat.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/voxelwise_statistics/vw_toolbox/delta-permutation_inference.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/voxelwise_statistics/vw_toolbox/delta-permutation_null.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/voxelwise_statistics/vw_toolbox/loocv.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/voxelwise_statistics/vw_toolbox/parallel-delta-permutations.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/voxelwise_statistics/vw_toolbox/parallel-permutations.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/voxelwise_statistics/vw_toolbox/permutations_synthesis.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/voxelwise_statistics/vw_toolbox/single-delta-permutation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/voxelwise_statistics/vw_toolbox/single-permutation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/voxelwise_statistics/vw_toolbox/voxel-wise-adaptive_heatmap.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/voxelwise_statistics/vw_toolbox/voxel-wise-bandwidth.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/voxelwise_statistics/vw_toolbox/voxel-wise-delta.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/voxelwise_statistics/vw_toolbox/voxel-wise-descriptive-stats.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/viewers/AnatomistShowVolumesGrid.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/viewers/ComponentPlotHistogram.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/viewers/VolumeAxisPlot.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/types/ants.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/types/biology.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/types/biovirtualmicroscopy.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/bioprocessing.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/bioprocessing.png
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/category_documentation.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/2d-3dpmi/IndividualizingSlices.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/photoreference/PhotoPipeline.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/clearmap/ClearMapConvert.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/clearmap/ClearMapResampling.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/clearmap/ElastixRegistration.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/projects/clearmap/ElastixTransformationEstimation.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/ASFMorpho.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/BoundingBoxTransformationApplication.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/ComputeBoundingBoxFromLabel.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/ConnectedComponentExtraction.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/CropListOfImage.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/ExtractComponentsInOrder.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/FovPreprocessing.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/IndividualizeLabeledImage.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/MorphologicalOperatorsApplication.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/ROIGraphMeshRendering.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/Smoothing.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/SubSampling.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicClosing.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicConnectComp.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicFlip.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicLinearComb.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicMask.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicOpening.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicReplaceLevel.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicResample.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicSubSampling.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicThreshold.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/toolbox/resample.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/bioprocessing/processes/research/viewers/AnatomistShowVolumesGrid.procdoc
-- Up-to-date: /casa/host/install/python/bioprocessing/__init__.py
-- Up-to-date: /casa/host/install/python/bioprocessing/boundingbox.py
-- Up-to-date: /casa/host/install/python/bioprocessing/clearmap/__init__.py
-- Up-to-date: /casa/host/install/python/bioprocessing/clearmap/io.py
-- Up-to-date: /casa/host/install/python/bioprocessing/ml_utils.py
-- Up-to-date: /casa/host/install/python/bioprocessing/qtgui/__init__.py
-- Up-to-date: /casa/host/install/python/bioprocessing/qtgui/data.py
-- Up-to-date: /casa/host/install/python/soma/aims/multires.py
-- Up-to-date: /casa/host/install/lib/libbioprocessing.so.5.2.0
-- Up-to-date: /casa/host/install/lib/libbioprocessing.so
-- Up-to-date: /casa/host/install/bin/AimsAffineRegister
-- Up-to-date: /casa/host/install/bin/AimsAmyloidDensity
-- Up-to-date: /casa/host/install/bin/AimsAmyloidLoadAvgDistNeigh
-- Up-to-date: /casa/host/install/bin/AimsAmyloidLoadInvSurfVor
-- Up-to-date: /casa/host/install/bin/AimsAmyloidDetection
-- Up-to-date: /casa/host/install/bin/AimsAmyloidFiltering
-- Up-to-date: /casa/host/install/bin/AimsAmyloidMRIDetection
-- Up-to-date: /casa/host/install/bin/AimsAreaNbConnectCompRatio
-- Up-to-date: /casa/host/install/bin/AimsBinaryBoundingBox
-- Up-to-date: /casa/host/install/bin/AimsBorderCrop
-- Up-to-date: /casa/host/install/bin/AimsBorderLineProj
-- Up-to-date: /casa/host/install/bin/AimsBinaryBorder
-- Up-to-date: /casa/host/install/bin/AimsBoundingBoxCalculation
-- Up-to-date: /casa/host/install/bin/AimsBoundingBoxExtraction
-- Up-to-date: /casa/host/install/bin/AimsComponentFeaturesProcess
-- Up-to-date: /casa/host/install/bin/AimsComponentFeaturesVisualize
-- Up-to-date: /casa/host/install/bin/AimsComponentFeaturesMapGenerate
-- Up-to-date: /casa/host/install/bin/AimsCorrectImages
-- Up-to-date: /casa/host/install/bin/AimsChannelProcess
-- Up-to-date: /casa/host/install/bin/AimsCreateFieldsFromMotion
-- Up-to-date: /casa/host/install/bin/AimsEntropicThresholding
-- Up-to-date: /casa/host/install/bin/AimsEqualizer
-- Up-to-date: /casa/host/install/bin/AimsFovCentering
-- Up-to-date: /casa/host/install/bin/AimsGenerateVolume
-- Up-to-date: /casa/host/install/bin/AimsGridCalibrate
-- Up-to-date: /casa/host/install/bin/AimsGridGenerate
-- Up-to-date: /casa/host/install/bin/AimsHeightFiltering
-- Up-to-date: /casa/host/install/bin/AimsIndexCluster
-- Up-to-date: /casa/host/install/bin/AimsIndividSlices
-- Up-to-date: /casa/host/install/bin/AimsInterlaceVolumes
-- Up-to-date: /casa/host/install/bin/AimsInterpolate
-- Up-to-date: /casa/host/install/bin/AimsLabelReorder
-- Up-to-date: /casa/host/install/bin/AimsMaskContour
-- Up-to-date: /casa/host/install/bin/AimsMergeFFDLabels
-- Up-to-date: /casa/host/install/bin/AimsMeshMatching
-- Up-to-date: /casa/host/install/bin/AimsMIBucketRegister
-- Up-to-date: /casa/host/install/bin/AimsMidPlaneMask
-- Up-to-date: /casa/host/install/bin/AimsMosaic
-- Up-to-date: /casa/host/install/bin/AimsMultiRecal
-- Up-to-date: /casa/host/install/bin/AimsOverlapInfo
-- Up-to-date: /casa/host/install/bin/AimsRebuildComp
-- Up-to-date: /casa/host/install/bin/AimsResampleFromFieldsData
-- Up-to-date: /casa/host/install/bin/AimsRgbToHsv
-- Up-to-date: /casa/host/install/bin/AimsRoiOverlap
-- Up-to-date: /casa/host/install/bin/AimsSamplingInfo
-- Up-to-date: /casa/host/install/bin/AimsSegment2Modes
-- Up-to-date: /casa/host/install/bin/AimsSeparateComp
-- Up-to-date: /casa/host/install/bin/AimsStereologySampling
-- Up-to-date: /casa/host/install/bin/AimsStereotaxy
-- Up-to-date: /casa/host/install/bin/AimsSubSamplingConservative
-- Up-to-date: /casa/host/install/bin/AimsWatershed
-- Up-to-date: /casa/host/install/bin/AimsSeededWatershed
-- Up-to-date: /casa/host/install/bin/bioCellBoundingBoxesGenerate
-- Up-to-date: /casa/host/install/bin/bioCellEvaluate
-- Up-to-date: /casa/host/install/bin/bioClusterStatistics
-- Up-to-date: /casa/host/install/bin/bioComponentConnexe
-- Up-to-date: /casa/host/install/bin/bioCorrectMissingLabels
-- Up-to-date: /casa/host/install/bin/bioExtractAmyloidLoad
-- Up-to-date: /casa/host/install/bin/bioExtractDice
-- Up-to-date: /casa/host/install/bin/bioFindCellSeeds
-- Up-to-date: /casa/host/install/bin/bioMacGetSingleBrain
-- Up-to-date: /casa/host/install/bin/bioPrepareData4DlIndiv
-- Up-to-date: /casa/host/install/bin/bioRenumberConnectComp
-- Up-to-date: /casa/host/install/bin/bioStatDominanceAppli
-- Up-to-date: /casa/host/install/bin/bioVoxelFeatures
-- Up-to-date: /casa/host/install/bin/AimsAdaptiveGaussianSmoothing
-- Up-to-date: /casa/host/install/bin/AimsEdgeExtract
-- Up-to-date: /casa/host/install/bin/AimsExtremaMap
-- Up-to-date: /casa/host/install/bin/AimsRegionGrowingExtrema
-- Up-to-date: /casa/host/install/bin/AimsSigmaImageCalculate
-- Up-to-date: /casa/host/install/bin/bioVoxelWiseStatistics
Built target install-bioprocessing
Built target primatologist-gpl_target_8
Built target primatologist-gpl_target_3
Built target primatologist-gpl_target_5
-- Install configuration: "Release"
-- Install component: "primatologist-gpl"
-- Up-to-date: /casa/host/install/python/primatologist/config.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/hierarchies/brainvisa-3.2.0/primatologist.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/hierarchies/shared/atlas.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/primatologist.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/analysis/HierarchicalRoiAnalysis.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/atlases/AtlasComputeCliqueFromLabels.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/atlases/AtlasHierarchyTools.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/atlases/AtlasVolumeToGraph.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_AtlasAffineMI.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_AtlasApply.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_AtlasFFD.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_BasicMixture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_BiasCorrection.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_BrainSegmentation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_CorticalFoldsGraph.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_CorticalFoldsThickness.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_GreyWhiteClassif.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_GreyWhiteMesh.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_GreyWhiteTopology.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_InvertT2.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_MaskForRegistration.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_Parcellation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_PialMesh.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_Prepare.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_QuickHistoAnalysis.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_Resample.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_SelectEvalPoints.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_SulciSkeleton.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_SulciVoronoi.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_TalairachTransform.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/import/ImportMRI.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/pipelines/Primatologist.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/pipelines/primate_AtlasRegistrationPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/pipelines/primate_HemiSurfacesAndSulciPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/pipelines/primate_PrepareForMorphologistPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/pipelines/primate_SegmentationPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/pipelines/primate_SurfacesAndSulciPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/tools/GrayLevelToTimeSeries.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/tools/convertAndMergeReference.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/tools/probaToColorMap.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/tools/segmentationScores.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewAffineReg.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewAllSulci.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewAtlasRawLabels.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewAtlasRawLat.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewAtlasRawPrior.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewBasicMixture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewBrainMask.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewEvalPoints.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewFFDReg.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewFFDRegLabels.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewFFDRegLat.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewFFDRegTemplate.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewGreyWhiteMask.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewMidInterface.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewNoBias.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewParcellation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewProbaVolume.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewRoots.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewSkeleton.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewSkullStrip.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewSplitBrainMask.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewSulciVoronoi.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/primate_ViewTopology.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/types/primatologist.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/primatologist.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/primatologist.png
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/analysis/HierarchicalRoiAnalysis.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/analysis/category_documentation.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/atlases/AtlasComputeCliqueFromLabels.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/atlases/AtlasHierarchyTools.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/atlases/AtlasVolumeToGraph.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/atlases/category_documentation.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/category_documentation.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_AtlasAffineMI.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_AtlasApply.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_AtlasFFD.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_BasicMixture.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_BiasCorrection.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_MaskForRegistration.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_Parcellation.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_Prepare.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_Resample.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/blocks/primate_SelectEvalPoints.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/category_documentation.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/import/ImportMRI.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/import/category_documentation.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/pipelines/Primatologist.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/pipelines/category_documentation.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/pipelines/primate_AtlasRegistrationPipeline.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/pipelines/primate_SegmentationPipeline.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/pipelines/primate_SurfacesAndSulciPipeline.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/tools/GrayLevelToTimeSeries.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/tools/category_documentation.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/tools/probaToColorMap.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/tools/segmentationScores.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/primatologist/processes/viewers/category_documentation.minf
-- Up-to-date: /casa/host/install/python/primatologist/__init__.py
-- Up-to-date: /casa/host/install/python/primatologist/atlas.py
-- Up-to-date: /casa/host/install/python/primatologist/harray.py
-- Up-to-date: /casa/host/install/python/primatologist/info.py
-- Up-to-date: /casa/host/install/python/primatologist/io.py
-- Up-to-date: /casa/host/install/python/primatologist/morphology.py
-- Up-to-date: /casa/host/install/python/primatologist/stat.py
-- Up-to-date: /casa/host/install/python/primatologist/utils.py
-- Up-to-date: /casa/host/install/lib/libprimatologist.so.5.2.0
-- Up-to-date: /casa/host/install/lib/libprimatologist.so
-- Up-to-date: /casa/host/install/bin/AimsSegmentationEM
-- Up-to-date: /casa/host/install/bin/AimsSelectGradPoints
-- Up-to-date: /casa/host/install/bin/AimsRegisterQNEstimate
-- Up-to-date: /casa/host/install/bin/bioKMeans
Built target install-primatologist-gpl
Built target install-constel-atlas
Built target constellation-gpl_target_2
Built target constellation-gpl_target_5
Built target constellation-gpl_target_7
-- Install configuration: "Release"
-- Install component: "constellation-gpl"
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/constellation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/hierarchies/brainvisa-3.2.0/constellation_hie.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/hierarchies/brainvisa-3.2.0/diffusion.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/hierarchies/connectomist-1.0/connectomist.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/hierarchies/shared/constellation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/clustering_evaluation/cluster_validity/average_silhouette_width.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/clustering_evaluation/cluster_validity/clustering_scores.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/clustering_evaluation/cluster_validity/constel_dice_index.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/clustering_evaluation/cluster_validity/validity_indexes.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/clustering_evaluation/clustering_techniques/dendrogram.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/constel_indiv_clusters_from_atlas_pipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/constel_indiv_clusters_from_atlas_pipeline_mrtrix.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/database_manipulation/constel_group_qc_table.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/database_manipulation/constel_individual_qc_table.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/database_manipulation/tools/constel_check_files_in_database.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/database_manipulation/tools/constel_delete_files_in_database.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/group_pipeline/constel_group_pipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/group_pipeline/tools/constel_group_clustering.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/group_pipeline/tools/constel_group_mask.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/group_pipeline/tools/constel_group_mask_normalize_profile.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/group_pipeline/tools/constel_group_profile.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/group_pipeline/tools/constel_group_regions_filtering.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/group_pipeline/tools/constel_indiv_clusters_from_atlas.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/group_pipeline/tools/constel_reduced_individual_matrices_from_group_regions.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/group_pipeline/tools/ward_method_group.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/constel_individual_pipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/constel_individual_pipeline_fsl_connectome.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/constel_individual_pipeline_mrtrix.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/individual_sub_pipeline/constel_individual_subpipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/individual_sub_pipeline/tools/constel_individual_clustering.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/individual_sub_pipeline/tools/constel_individual_high_connectivity_regions.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/individual_sub_pipeline/tools/constel_individual_reduced_matrix.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/individual_sub_pipeline/tools/constel_individual_regions_filtering.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/individual_sub_pipeline/tools/constel_mean_individual_profile.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/individual_sub_pipeline/tools/constel_normalize_individual_profile.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/individual_sub_pipeline/tools/constel_smooth_matrix.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/tools_connectomist/constel_brain_tracts_filtering.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/tools_connectomist/constel_fiber_oversampler.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/tools_connectomist/constel_sparse_individual_matrices.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/tools_fsl/constel_fsl_connectome.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/tools_fsl/import_fsl_connectome.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/tools_mrtrix/constel_brain_tracts_filtering_mrtrix.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/tools_mrtrix/constel_sparse_individual_matrices_mrtrix.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/miscellaneous/concatenate_roi_segmentations.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/miscellaneous/constel_clean_clustering.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/miscellaneous/constel_cleaner.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/miscellaneous/constel_connectome_reduced.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/miscellaneous/constel_cutter.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/miscellaneous/constel_fiber_lengths_histogram.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/miscellaneous/constel_fiber_number_barchart.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/miscellaneous/constel_generate_text_table.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/miscellaneous/constel_merge_nuclei_white_mesh.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/miscellaneous/constel_optimal_clustering.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/miscellaneous/constel_optimal_clustering_atlas.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/miscellaneous/extract_clusters.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/miscellaneous/gyri_texture_cleaning_isolated_vertices.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/miscellaneous/merge_labels_from_texture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/miscellaneous/write_matrix2csv.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomistViewConnectivity.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomistViewConnectivityRegionSmallBrain.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomistViewConnectivityTextureSmallBrain.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomistViewConnmatrix.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomistViewReorderMatrix.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomist_clusters_inspect.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomist_plotting_concatenated_parcellations.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomist_plotting_connectivity_parcellation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomist_plotting_connectivity_profiles.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomist_plotting_group_mask.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomist_show_profiles_specific_element.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomist_view_coloring_map.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomist_view_colormap.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomist_view_connectivity_roi_texture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomist_view_connectivity_texture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomist_view_group_label_texture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/process_specific/anatomist_show_profiles_specific_element_atlas_pipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/process_specific/anatomist_view_conn_matrix_atlas_pipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/process_specific/anatomist_view_connectivity_roi_texture_atlas_pipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/process_specific/anatomist_view_connectivity_texture_atlas_pipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/process_specific/anatomist_view_group_label_texture_group_pipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/startup.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/types/constellation_types.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/types/diffusion.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/constellation.png
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/category_documentation.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/clustering_evaluation/cluster_validity/average_silhouette_width.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/clustering_evaluation/cluster_validity/clustering_scores.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/clustering_evaluation/cluster_validity/validity_indexes.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/clustering_evaluation/clustering_techniques/dendrogram.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/constel_indiv_clusters_from_atlas_pipeline.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/constel_individual_and_group_pipeline.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/database_manipulation/constel_group_qc_table.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/database_manipulation/constel_individual_qc_table.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/group_pipeline/constel_group_pipeline.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/group_pipeline/tools/constel_group_clustering.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/group_pipeline/tools/constel_group_mask.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/group_pipeline/tools/constel_group_mask_normalize_profile.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/group_pipeline/tools/constel_group_profile.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/group_pipeline/tools/constel_group_regions_filtering.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/group_pipeline/tools/constel_indiv_clusters_from_atlas.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/group_pipeline/tools/constel_reduced_individual_matrices_from_group_regions.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/group_pipeline/tools/ward_method_group.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/constel_individual_pipeline.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/constel_individual_pipeline_fsl_connectome.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/individual_sub_pipeline/constel_individual_subpipeline.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/individual_sub_pipeline/tools/constel_individual_clustering.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/individual_sub_pipeline/tools/constel_individual_high_connectivity_regions.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/individual_sub_pipeline/tools/constel_individual_reduced_matrix.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/individual_sub_pipeline/tools/constel_individual_regions_filtering.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/individual_sub_pipeline/tools/constel_mean_individual_profile.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/individual_sub_pipeline/tools/constel_normalize_individual_profile.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/individual_sub_pipeline/tools/constel_smooth_matrix.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/tools_connectomist/constel_brain_tracts_filtering.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/tools_connectomist/constel_fiber_oversampler.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/tools_connectomist/constel_sparse_individual_matrices.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/tools_fsl/constel_fsl_connectome.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/individual_pipelines/tools_fsl/import_fsl_connectome.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomistViewConnmatrix.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomist_clusters_inspect.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/constellation/processes/viewers/anatomist_show_profiles_specific_element.procdoc
Built target install-constellation-gpl
Built target constellation-nonfree_target_6
-- Install configuration: "Release"
-- Install component: "constellation-nonfree"
-- Up-to-date: /casa/host/install/python/constel/__init__.py
-- Up-to-date: /casa/host/install/python/constel/anatomist/__init__.py
-- Up-to-date: /casa/host/install/python/constel/anatomist/clusters_inspect.py
-- Up-to-date: /casa/host/install/python/constel/cmd/__init__.py
-- Up-to-date: /casa/host/install/python/constel/info.py
-- Up-to-date: /casa/host/install/python/constel/lib/__init__.py
-- Up-to-date: /casa/host/install/python/constel/lib/clustering/__init__.py
-- Up-to-date: /casa/host/install/python/constel/lib/clustering/clusterstools.py
-- Up-to-date: /casa/host/install/python/constel/lib/evaluation/__init__.py
-- Up-to-date: /casa/host/install/python/constel/lib/evaluation/indices.py
-- Up-to-date: /casa/host/install/python/constel/lib/methods/__init__.py
-- Up-to-date: /casa/host/install/python/constel/lib/methods/kmedoids_clustering.py
-- Up-to-date: /casa/host/install/python/constel/lib/methods/squared_euclidean_distance_matrices.py
-- Up-to-date: /casa/host/install/python/constel/lib/utils/__init__.py
-- Up-to-date: /casa/host/install/python/constel/lib/utils/colormaptools.py
-- Up-to-date: /casa/host/install/python/constel/lib/utils/create_documents.py
-- Up-to-date: /casa/host/install/python/constel/lib/utils/fibertools.py
-- Up-to-date: /casa/host/install/python/constel/lib/utils/filetools.py
-- Up-to-date: /casa/host/install/python/constel/lib/utils/four_color_theorem.py
-- Up-to-date: /casa/host/install/python/constel/lib/utils/graphtools.py
-- Up-to-date: /casa/host/install/python/constel/lib/utils/matrixtools.py
-- Up-to-date: /casa/host/install/python/constel/lib/utils/meshtools.py
-- Up-to-date: /casa/host/install/python/constel/lib/utils/misctools.py
-- Up-to-date: /casa/host/install/python/constel/lib/utils/texturetools.py
-- Up-to-date: /casa/host/install/python/constel/plugins_anatomist/selectionbis.py
-- Up-to-date: /casa/host/install/share/anatomist-5.2/python_plugins/bundles_small_brains.py
-- Up-to-date: /casa/host/install/share/anatomist-5.2/python_plugins/bundles_split_by_cortical_regions.py
-- Up-to-date: /casa/host/install/share/anatomist-5.2/python_plugins/bundles_small_brains.png
-- Up-to-date: /casa/host/install/lib/libconstellation.so.5.2.0
-- Up-to-date: /casa/host/install/lib/libconstellation.so
-- Up-to-date: /casa/host/install/bin/AimsSparseMatrixSmoothing
-- Up-to-date: /casa/host/install/bin/constelBundlesFiltering
-- Up-to-date: /casa/host/install/bin/constelConnectionDensityTexture
-- Up-to-date: /casa/host/install/bin/constelConnectivityMatrix
-- Up-to-date: /casa/host/install/bin/constelFibersLengths
-- Up-to-date: /casa/host/install/bin/constelMeanConnectivityProfileFromMatrix
-- Up-to-date: /casa/host/install/bin/constelSelectBundlesFromNames
-- Up-to-date: /casa/host/install/bin/constelSelectFibersFromMesh
-- Up-to-date: /casa/host/install/python/constel/constelsip.so
-- Up-to-date: /casa/host/install/python/constel/constelsip.so
Built target install-constellation-nonfree
-- Install configuration: "Release"
-- Install component: "cortical_surface-nonfree"
-- Up-to-date: /casa/host/install/lib/libcortical_surface.so.5.2.0
-- Up-to-date: /casa/host/install/lib/libcortical_surface.so
-- Up-to-date: /casa/host/install/bin/AimsConstraintCleaner
-- Up-to-date: /casa/host/install/bin/AimsGyriStuff
-- Up-to-date: /casa/host/install/bin/AimsCorticalReferential
-- Up-to-date: /casa/host/install/bin/AimsMeshIsoLine
-- Up-to-date: /casa/host/install/bin/AimsCorticalThickness
-- Up-to-date: /casa/host/install/bin/AimsFunctionProjection
-- Up-to-date: /casa/host/install/bin/AimsMeshMedianSurface
-- Up-to-date: /casa/host/install/bin/AimsCoordinateGridMesh
-- Up-to-date: /casa/host/install/bin/AimsCoordinatesTextureToMesh
-- Up-to-date: /casa/host/install/bin/AimsCoordinatesToTexture
-- Up-to-date: /casa/host/install/bin/AimsFlattenCortex
-- Up-to-date: /casa/host/install/bin/AimsParameterizeGyri
-- Up-to-date: /casa/host/install/bin/AimsParameterizeSulcus
-- Up-to-date: /casa/host/install/bin/AimsPlotOnSPhericalAtlas
-- Up-to-date: /casa/host/install/bin/AimsSulcusCorticalSnake
-- Up-to-date: /casa/host/install/bin/AimsTextureToAtlas
-- Up-to-date: /casa/host/install/bin/surfTexActivationSimulation
-- Up-to-date: /casa/host/install/bin/surfStructuralAnalysis
-- Up-to-date: /casa/host/install/bin/AimsCheck2DCoordinates
-- Up-to-date: /casa/host/install/bin/AimsMeshToAtlas
-- Up-to-date: /casa/host/install/bin/AimsSulcusNormalizeDepthProfile
-- Up-to-date: /casa/host/install/bin/AimsConformalMapping
-- Up-to-date: /casa/host/install/bin/AimsMeshCoordinatesToDecimated
-- Up-to-date: /casa/host/install/bin/AimsExtractGyrus
-- Up-to-date: /casa/host/install/bin/AimsMeshToMeshPoint
-- Up-to-date: /casa/host/install/bin/AimsPlotCoordinatesOnMesh
-- Up-to-date: /casa/host/install/bin/PlotFociForValidation
-- Up-to-date: /casa/host/install/bin/AimsCoordinatesToIndex
-- Up-to-date: /casa/host/install/bin/AimsGyriRegularization
-- Up-to-date: /casa/host/install/bin/AimsGroupGyri
-- Up-to-date: /casa/host/install/bin/AimsGeodesicPath
-- Up-to-date: /casa/host/install/bin/AimsInterpolateVolumeToSurface
-- Up-to-date: /casa/host/install/bin/AimsSulcalLines
-- Up-to-date: /casa/host/install/bin/AimsTextureCompare
-- Up-to-date: /casa/host/install/bin/AimsExactDepthArea
Built target install-cortical_surface-nonfree
Built target cortical_surface-gpl_target_7
Built target cortical_surface-gpl_target_3
Built target cortical_surface-gpl_target_5
-- Install configuration: "Release"
-- Install component: "cortical_surface-gpl"
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/cortical_surface.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/hierarchies/brainvisa-3.0/cortical_surface.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/hierarchies/brainvisa-3.1.0/cortical_surface.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/hierarchies/brainvisa-3.2.0/cortical_surface.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/hierarchies/flat/cortical_surface.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/hierarchies/shared/surfaceanalysis.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/HipHopCorticalParameterization.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/ParameterizeSulcus2015.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/SulcalPitsExtraction.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/group/AverageSulcusMorphologicalCurves.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/group/BuildModelFromData.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/group/BuildSymmetricModel.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/group/Group_watershed.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/group/MakeAverageMesh.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/group/PitsDensityMap.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/group/ProjectTextureOntoAtlas.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/group/RemeshFromSphere.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/group/RemeshToAtlas.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/group/SendTextureToAtlas.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/group/averageSulci.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/morphometry/MeshArea.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/morphometry/MeshFiedlerLength.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/morphometry/ParcelsArea.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/morphometry/ParcelsVolume.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/ChangeTemplateReferential.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/CingularPoleProjectionLeft.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/CingularPoleProjectionRight.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/ConstraintCleanerLeft.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/ConstraintCleanerRight.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/CorticalConstraintsLeft.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/CorticalConstraintsRight.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/CorticalParcellation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/HarmonicMappingOrthoLeft.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/HarmonicMappingOrthoRight.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/HemisphereProcessLeft2012.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/HemisphereProcessRight2012.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/InsularPoleProjectionRight.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/LeftHemisphereProcess.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/ParameterizeHemisphereLeft.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/ParameterizeHemisphereRight.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/ParameterizeSulcus.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/ParameterizeUnconstrainedHarmonicLeft.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/ParameterizeUnconstrainedHarmonicRight.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/ParcellationLeft.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/ParcellationRight.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/ProjectTextureOntoAtlas_old.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/RightHemisphereProcess.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/SulcalinesExtractionLeft.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/SulcalinesExtractionRight.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/CingularPoleFromFreesurfer.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/CingularPoleFromManualDrawing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/CingularPoleProjection.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/CoordinateGridMesh.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/CoordinatesFromHipHopMapping.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/CoordinatesFromHipMapping.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/CorticalConstraints.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/DepthPotentialFunction.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/GyriRegularizationLeft.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/GyriRegularizationRight.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/HarmonicCoordsToSphere.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/HarmonicMappingOrtho.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/HemisphereProcess2012.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/InsularPoleFromManualDrawing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/InsularPoleProjection.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/LaplacianEigenVectors.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/Mesh_watershed.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/ParameterizeUnconstrainedHarmonic.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/ParcelsTextureFromCoordinates.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/PitsTextureSmoothing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/PolesTexturesSanityCheck.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/SubcorticalFromFreesurferToMarsAtlas.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/SulcalinesExtraction.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/Texture2FlatMesh.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/draw_mesh_to_sphere.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/flatmap_image.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/resample_freesurfer_gyri_to_hiphop.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/resample_mesh_from_coords_fields.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/resample_texture_from_coords_fields.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/sulcalPitsLabelizationFromSulci.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/sulciGraphVoronoi.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/surface_sulci_dpf.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/surface_sulci_projection_dpf.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/surface_sulci_projection_nearest.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/template_spherical_mesh.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/functional/AverageFunctionalInGyri.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/functional/CreateSurfaceBasedFunctionalData.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/functional/CreateSurfaceBasedSPMtMaps.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/functional/GetFunctionalSignalsInGyri.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/functional/misc/ApplyTransformationToMesh.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/functional/misc/RandomEffect.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/functional/misc/projAverageVolumes.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/functional/projection_to_cortical_surface/CreateKernels.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/functional/projection_to_cortical_surface/ProjectionUsingKernels.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/low-level/2DGeodesicTextureSmoothing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/low-level/2dParcellationTo3dParcellation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/low-level/2dTo3d.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/low-level/LaplacianMeshSmoothing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/low-level/LaplacianTextureSmoothing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/low-level/TexLinearComb.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/low-level/TexMorphomat.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/low-level/TexRegul.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/low-level/ThresholdTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/low-level/getSulcusMesh.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/low-level/surfacicSulciToLabelsVolume.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/low-level/texture_operation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/miscellaneous/TexSpam.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/miscellaneous/TextureValueByClick.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/miscellaneous/createSphericalMeshCoordsTextures.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/miscellaneous/experimental/CorticalThickness.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/miscellaneous/experimental/MeshMedianSurface.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/miscellaneous/experimental/ParameterizeUnconstrainedHarmonicMultiplePaths.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/miscellaneous/experimental/ParcelsTextureFromCoordinatesHeschl.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/miscellaneous/experimental/ParcelsTextureFromCoordinates_PNH.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/miscellaneous/experimental/SulcalinesExtractionCombined.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/miscellaneous/experimental/SulcalinesExtraction_options.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/miscellaneous/oldProcesses/2DGeodesicPrimalSketch.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/miscellaneous/oldProcesses/2DWhiteMatterParcellation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/miscellaneous/oldProcesses/CorticalBasedReferential.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/miscellaneous/oldProcesses/SulcalParcellation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowBasinsTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowCingularPoleTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowCorticalConstraintsTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowDPFTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowEigenVectorsTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowGyriParcelsTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowGyriTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowGyrusGraph.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowInsulaPoleTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowLabeledBasinsTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowLabeledPitsAsSpheres.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowLabeledPitsTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowLatitudeCoordinatesTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowLobelParcelsTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowLongitudeCoordinatesTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowMarsAtlasParcelsTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowModelParcelsTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowNoisyPitsTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowPitsAsSpheres.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowPitsTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowPrimalBlobs.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowRectangularBoundaryTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowRectangularSulcalLinesTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowRidgesTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowSmoothedPitsTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowSulcalLinesAfterHIP.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowSulcalLinesAfterHop.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowSulcalLinesTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowSulciTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowSulciVoronoiTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/AnatomistShowTextureExtremaAsSpheres.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/BrainvisaShowGyriModel.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/SurfaceActivationsViewer.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/types/cortical_surface.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/cortical_surface.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/cortical_surface.png
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/HipHopCorticalParameterization.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/ParameterizeSulcus2015.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/SulcalPitsExtraction.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/group/BuildModelFromData.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/group/BuildSymmetricModel.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/group/Group_watershed.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/group/PitsDensityMap.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/group/RemeshToAtlas.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/group/SendTextureToAtlas.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/ParameterizeSulcus.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/DepthPotentialFunction.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/Mesh_watershed.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/PitsTextureSmoothing.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/Texture2FlatMesh.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/anatomy/tools/flatmap_image.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/category_documentation.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/cortSurf_toolbox.png
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/functional/CreateSurfaceBasedFunctionalData.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/functional/CreateSurfaceBasedSPMtMaps.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/functional/misc/ApplyTransformationToMesh.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/functional/misc/RandomEffect.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/functional/projection_to_cortical_surface/CreateKernels.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/functional/projection_to_cortical_surface/ProjectionUsingKernels.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/low-level/texture_operation.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/miscellaneous/oldProcesses/CorticalBasedReferential.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/cortical_surface/processes/viewers/SurfaceActivationsViewer.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/__init__.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/morpho_curves/__init__.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/morpho_curves/curveAnalysis.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/multiprocessing/__init__.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/multiprocessing/iterateAnalysis.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/multiprocessing/mproc.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/parameterization/__init__.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/parameterization/mapping.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/parameterization/model.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/parameterization/sulcalLine.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/parameterization/sulcalLinesSet.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/shell/__init__.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/shell/db.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/shell/inputParameters.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/structural/__init__.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/structural/blobManip.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/structural/cliques.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/structural/clusters.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/structural/graphManip.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/structural/s3D/PrimalSketch3DGroupGraph.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/structural/s3D/PrimalSketch3DIndividual.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/structural/s3D/__init__.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/surface_tools/PDE_tools.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/surface_tools/__init__.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/surface_tools/basic_tools.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/surface_tools/mesh_watershed.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/surface_tools/readSulcusLabelTranslationFile.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/surface_tools/stereo_projection.py
-- Up-to-date: /casa/host/install/python/brainvisa/cortical_surface/surface_tools/texture_tools.py
Built target install-cortical_surface-gpl
Built target brainvisa_freesurfer_target_5
Built target brainvisa_freesurfer_target_3
-- Install configuration: "Release"
-- Install component: "brainvisa_freesurfer"
-- Up-to-date: /casa/host/install/python/brainvisa/configuration/freesurfer_configuration.py
-- Up-to-date: /casa/host/install/python/freesurfer/__init__.py
-- Up-to-date: /casa/host/install/python/freesurfer/brainvisaFreesurfer.py
-- Up-to-date: /casa/host/install/python/freesurfer/concatenate_textures.py
-- Up-to-date: /casa/host/install/python/freesurfer/freesurferMeshToAimsMesh.py
-- Up-to-date: /casa/host/install/python/freesurfer/freesurferTexture2Tex.py
-- Up-to-date: /casa/host/install/python/freesurfer/fs_hierarchy.py
-- Up-to-date: /casa/host/install/python/freesurfer/get_cerebellum.py
-- Up-to-date: /casa/host/install/python/freesurfer/giiToTex.py
-- Up-to-date: /casa/host/install/python/freesurfer/normalizeMesh.py
-- Up-to-date: /casa/host/install/python/freesurfer/regularizeMeshFromIsin.py
-- Up-to-date: /casa/host/install/python/freesurfer/regularizeParcelTexture.py
-- Up-to-date: /casa/host/install/python/freesurfer/regularizeSphericalMesh_hack4.py
-- Up-to-date: /casa/host/install/python/freesurfer/regularizeTexture.py
-- Up-to-date: /casa/host/install/python/freesurfer/setAnatTransformation.py
-- Up-to-date: /casa/host/install/python/freesurfer/surf2surf_mesh.py
-- Up-to-date: /casa/host/install/python/freesurfer/tio.py
-- Up-to-date: /casa/host/install/python/freesurfer/ico100_7.gii
-- Up-to-date: /casa/host/install/python/freesurfer/ico100_7.mesh
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/freesurfer.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/hierarchies/freesurfer-bids/freesurfer_bids_hie.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/hierarchies/freesurfer/freesurfer_hie.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/hierarchies/shared/freesurferShared.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/initialization.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/AverageBrain/freesurferCreateGroup.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/AverageBrain/freesurferMeanGyriTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/AverageBrain/freesurferMeanMesh.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/AverageBrain/freesurfer_average_brain_pipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Import/Import_FROM_FreeSurfer_TO_Morpho.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/Longitudinal/freesurferAverageSubjectLongitudinal.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/Longitudinal/freesurferLongitudinalPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/aparcstats.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/asegstats.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/createmeshesreferential.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferAnatToMeshesTransformation.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferAnatToNii.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferAnatToTalairachTransform.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferConcatTex.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferConcatenate.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferConversionGiiMeshToAims.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferConversionMeshToGii.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferConversionVolumeFreesurferToNativeSpace.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferCreateSubject.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferFilesExist.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferGiiTexturesToAims.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferInflate.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferIsinComputing.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferLabelAsciiConvert.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferLabelToAimsTexture.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferLabelToTex.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferMakeTemplateSphericalMesh.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferMeshResampling.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferMeshToAimsRef.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferNativeMeshToAimsRef.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferNormalizeMesh.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferResampleLabels.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferResamplingDataTextures.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferTexturesToGii.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferToBrainvisaConversionPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferToBrainvisaConversionPipelineLight.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferToBrainvisaNativeMeshesConversionPipeline.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurfer_resample_mesh_to_freesurfer_ico.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/getCerebellum.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Viewers/freesurferGyriViewer.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Viewers/freesurferMeshViewer.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Viewers/freesurferResampledGyriViewer.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Viewers/freesurferResampledTextureDataViewer.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Viewers/freesurferTextureDataViewer.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/converters/freesurferMgzToNifti.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/converters/freesurferNiftiToMgz.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/freeSurferPipelineCompleteLongitudinal.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/freesurferPipelineComplete.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/freesurfer_qc_table.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/types/freesurferShared_types.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/types/freesurfer_types.py
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/freesurfer.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/freesurfer.png
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/AverageBrain/freesurferCreateGroup.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/AverageBrain/freesurferMeanGyriTexture.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/AverageBrain/freesurferMeanMesh.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/AverageBrain/freesurfer_average_brain_pipeline.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Import/Import_FROM_FreeSurfer_TO_Morpho.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferCreateSubject.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferFilesExist.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferIsinComputing.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferPipeline.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferToBrainvisaConversionPipeline.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurferToBrainvisaConversionPipelineLight.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/Tools/freesurfer_resample_mesh_to_freesurfer_ico.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/category_documentation.minf
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/freesurferPipelineComplete.procdoc
-- Up-to-date: /casa/host/install/python/brainvisa/toolboxes/freesurfer/processes/freesurfer_qc_table.procdoc
Built target install-brainvisa_freesurfer
Built target install-runtime
-- Install configuration: "Release"
-- Install component: "Brainvisa-test"
Built target install-Brainvisa-test
-- Install configuration: "Release"
-- Install component: "neuro-forge-test"
Built target install-neuro-forge-test
-- Install configuration: "Release"
-- Install component: "brainvisa-cmake-test"
Built target install-brainvisa-cmake-test
-- Install configuration: "Release"
-- Install component: "casa-distro-test"
Built target install-casa-distro-test
-- Install configuration: "Release"
-- Install component: "brainvisa-share-test"
Built target install-brainvisa-share-test
-- Install configuration: "Release"
-- Install component: "soma-base-test"
Built target install-soma-base-test
-- Install configuration: "Release"
-- Install component: "soma-io-test"
-- Installing: /casa/host/install/bin/cartoRcptr_test
-- Set runtime path of "/casa/host/install/bin/cartoRcptr_test" to ""
-- Installing: /casa/host/install/bin/cartoScopedptr_test
-- Set runtime path of "/casa/host/install/bin/cartoScopedptr_test" to ""
-- Installing: /casa/host/install/bin/cartoSharedptr_test
-- Set runtime path of "/casa/host/install/bin/cartoSharedptr_test" to ""
-- Installing: /casa/host/install/bin/cartoWeakptr_test
-- Set runtime path of "/casa/host/install/bin/cartoWeakptr_test" to ""
-- Installing: /casa/host/install/bin/cartoAlgorithm_test
-- Set runtime path of "/casa/host/install/bin/cartoAlgorithm_test" to ""
-- Installing: /casa/host/install/bin/cartoConversion_test
-- Set runtime path of "/casa/host/install/bin/cartoConversion_test" to ""
-- Installing: /casa/host/install/bin/cartoDataTypeTraits_test
-- Set runtime path of "/casa/host/install/bin/cartoDataTypeTraits_test" to ""
-- Installing: /casa/host/install/bin/cartoMultiThread_test
-- Set runtime path of "/casa/host/install/bin/cartoMultiThread_test" to ""
-- Installing: /casa/host/install/bin/cartoMutex_test
-- Set runtime path of "/casa/host/install/bin/cartoMutex_test" to ""
-- Installing: /casa/host/install/bin/cartoThreadedRcptr_test
-- Set runtime path of "/casa/host/install/bin/cartoThreadedRcptr_test" to ""
-- Installing: /casa/host/install/bin/cartoUuid_test
-- Set runtime path of "/casa/host/install/bin/cartoUuid_test" to ""
-- Installing: /casa/host/install/bin/cartoObject_test
-- Set runtime path of "/casa/host/install/bin/cartoObject_test" to ""
-- Installing: /casa/host/install/bin/somaCapabilities_test
-- Set runtime path of "/casa/host/install/bin/somaCapabilities_test" to ""
-- Installing: /casa/host/install/bin/somaDSList_test
-- Set runtime path of "/casa/host/install/bin/somaDSList_test" to ""
Built target install-soma-io-test
-- Install configuration: "Release"
-- Install component: "soma-workflow-test"
Built target install-soma-workflow-test
-- Install configuration: "Release"
-- Install component: "capsul-test"
Built target install-capsul-test
-- Install configuration: "Release"
-- Install component: "populse-db-test"
Built target install-populse-db-test
-- Install configuration: "Release"
-- Install component: "aims-free-test"
-- Installing: /casa/host/install/bin/cartoVolume_test
-- Set runtime path of "/casa/host/install/bin/cartoVolume_test" to ""
-- Installing: /casa/host/install/bin/AimsStructuringElement_test
-- Set runtime path of "/casa/host/install/bin/AimsStructuringElement_test" to ""
-- Installing: /casa/host/install/bin/AimsPartialIO_test
-- Set runtime path of "/casa/host/install/bin/AimsPartialIO_test" to ""
-- Installing: /casa/host/install/bin/AimsVarious_test
-- Set runtime path of "/casa/host/install/bin/AimsVarious_test" to ""
-- Installing: /casa/host/install/bin/AimsTransformation_test
-- Set runtime path of "/casa/host/install/bin/AimsTransformation_test" to ""
Built target install-aims-free-test
-- Install configuration: "Release"
-- Install component: "aims-gpl-test"
Built target install-aims-gpl-test
-- Install configuration: "Release"
-- Install component: "anatomist-free-test"
Built target install-anatomist-free-test
-- Install configuration: "Release"
-- Install component: "anatomist-gpl-test"
Built target install-anatomist-gpl-test
-- Install configuration: "Release"
-- Install component: "axon-test"
Built target install-axon-test
-- Install configuration: "Release"
-- Install component: "brainvisa-spm-test"
Built target install-brainvisa-spm-test
Built target highres-cortex_target_8
Built target highres-cortex_target_5
-- Install configuration: "Release"
-- Install component: "highres-cortex-test"
Built target install-highres-cortex-test
-- Install configuration: "Release"
-- Install component: "morphologist-nonfree-test"
-- Installing: /casa/host/install/bin/vip_test_well_composed_configurations
-- Set runtime path of "/casa/host/install/bin/vip_test_well_composed_configurations" to ""
-- Installing: /casa/host/install/bin/vip_test_well_composed_topology
-- Set runtime path of "/casa/host/install/bin/vip_test_well_composed_topology" to ""
Built target install-morphologist-nonfree-test
-- Install configuration: "Release"
-- Install component: "morphologist-gpl-test"
Built target install-morphologist-gpl-test
-- Install configuration: "Release"
-- Install component: "sulci-nonfree-test"
Built target install-sulci-nonfree-test
-- Install configuration: "Release"
-- Install component: "morphologist-ui-test"
Built target install-morphologist-ui-test
-- Install configuration: "Release"
-- Install component: "morpho-deepsulci-test"
Built target install-morpho-deepsulci-test
-- Install configuration: "Release"
-- Install component: "brainrat-gpl-test"
Built target install-brainrat-gpl-test
-- Install configuration: "Release"
-- Install component: "brainrat-private-test"
Built target install-brainrat-private-test
-- Install configuration: "Release"
-- Install component: "bioprocessing-test"
Built target install-bioprocessing-test
-- Install configuration: "Release"
-- Install component: "primatologist-gpl-test"
Built target install-primatologist-gpl-test
-- Install configuration: "Release"
-- Install component: "constellation-gpl-test"
Built target install-constellation-gpl-test
-- Install configuration: "Release"
-- Install component: "constellation-nonfree-test"
Built target install-constellation-nonfree-test
-- Install configuration: "Release"
-- Install component: "cortical_surface-nonfree-test"
Built target install-cortical_surface-nonfree-test
-- Install configuration: "Release"
-- Install component: "cortical_surface-gpl-test"
Built target install-cortical_surface-gpl-test
-- Install configuration: "Release"
-- Install component: "brainvisa_freesurfer-test"
Built target install-brainvisa_freesurfer-test
Built target install-test
----------------------------------------
Consolidated casa_distro environment configuration:
{
    "branch": "master",
    "casa_distro_compatibility": "3",
    "config_files": [
        "/volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/conf/casa_distro.json",
        "/home/a-sac-ns-brainvisa/.config/casa-distro/casa_distro_3.json"
    ],
    "container_type": "singularity",
    "directory": "/volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3",
    "distro": "cea",
    "env": {
        "CASA_DISTRO": "{distro}",
        "CASA_ENVIRONMENT": "{name}",
        "CASA_HOST_DIR": "{directory}",
        "CASA_SYSTEM": "{system}",
        "SOMAWF_INPUT_PARAMS": "$SOMAWF_INPUT_PARAMS",
        "SOMAWF_OUTPUT_PARAMS": "$SOMAWF_OUTPUT_PARAMS"
    },
    "gui_env": {
        "DISPLAY": "$DISPLAY"
    },
    "image": "../casa-dev-5.3-25.sif",
    "image_id": "160adba6-b807-42c9-ae6d-2c5443d0466f",
    "image_version": "5.3",
    "mounts": {
        "/casa/home": "/volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/home",
        "/casa/host": "{directory}",
        "/drf": "/drf",
        "/home": "/home",
        "/host": "/",
        "/i2bm": "/i2bm",
        "/media": "/media",
        "/mnt": "/mnt",
        "/neurospin": "/neurospin",
        "/srv": "/srv",
        "/var/lib/xkb": "/volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/home/.varlib/xkb",
        "/volatile": "/volatile"
    },
    "name": "cea-master-5.3",
    "system": "ubuntu-22.04",
    "type": "dev"
}
Running singularity with the following command:
'/usr/bin/apptainer' 'run' '--cleanenv' '--pwd' '/casa/host/build' '--bind' '/volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3:/casa/host' '--bind' '/:/host' '--bind' '/drf:/drf' '--bind' '/home:/home' '--bind' '/i2bm:/i2bm' '--bind' '/media:/media' '--bind' '/mnt:/mnt' '--bind' '/neurospin:/neurospin' '--bind' '/srv:/srv' '--bind' '/volatile:/volatile' '--bind' '/volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/home:/casa/home' '--bind' '/volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/home/.varlib/xkb:/var/lib/xkb' '--bind' '/home/a-sac-ns-brainvisa' '--home' '/volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/home:/casa/home' '/volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/../casa-dev-5.3-28.sif' 'bash' '-c' 'bv_env_test make BRAINVISA_INSTALL_PREFIX=/casa/host/install post-install'

Using the following environment:
    APPTAINERENV_CASA_BRANCH=master
    APPTAINERENV_CASA_DISTRO=cea
    APPTAINERENV_CASA_ENVIRONMENT=cea-master-5.3
    APPTAINERENV_CASA_HOST_DIR=/volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3
    APPTAINERENV_CASA_HOST_HOME=/home/a-sac-ns-brainvisa
    APPTAINERENV_CASA_SYSTEM=ubuntu-22.04
    APPTAINERENV_SOMAWF_INPUT_PARAMS=$SOMAWF_INPUT_PARAMS
    APPTAINERENV_SOMAWF_OUTPUT_PARAMS=$SOMAWF_OUTPUT_PARAMS
    CASA_BASE_DIRECTORY=/volatile/a-sac-ns-brainvisa/bbi_nightly
    CASA_DIR=/volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3
    HOME=/home/a-sac-ns-brainvisa
    LANG=fr_FR.UTF-8
    LOGNAME=a-sac-ns-brainvisa
    MAILTO=appli@saxifrage.cea.fr
    PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
    PWD=/home/a-sac-ns-brainvisa
    SHELL=/bin/sh
    TMPDIR=/volatile/tmp/a-sac-ns-brainvisa
    TZ=:/etc/localtime
----------------------------------------
Initializing brainvisa... (takes a while)...
QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/tmp/runtime-a-sac-ns-brainvisa'


 _Process **Update databases** started on 2025/06/30 06:24_

Generating database tables for
/casa/host/install/share/disco-5.2/disco_templates_hbp_morpho

 **Clear database:
/casa/host/install/share/disco-5.2/disco_templates_hbp_morpho**

 **Update database:
/casa/host/install/share/disco-5.2/disco_templates_hbp_morpho**

/casa/host/install/share/disco-5.2/disco_templates_hbp_morpho: parse
directories and insert items

/casa/host/install/share/disco-5.2/disco_templates_hbp_morpho: 54 files are
stored as 46 DiskItems in 0 seconds

  
 _Process **Update databases** finished on 2025/06/30 06:24 (1 seconds)_

Built target disco_install_shared_index
Loading toolbox bioprocessing
Loading toolbox brainrat
Loading toolbox constellation
Loading toolbox cortical_surface
Loading toolbox data management
Loading toolbox disco
Loading toolbox freesurfer
Loading toolbox highres_cortex
Loading toolbox morphologist
Loading toolbox primatologist
Loading toolbox spm
Loading toolbox structural_analysis
Loading toolbox tools
Loading toolbox viewers
Loading toolbox My processes
The log file for this session is '/casa/home/.brainvisa/brainvisa.log'

QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/tmp/runtime-a-sac-ns-brainvisa'
Attribute Qt::AA_ShareOpenGLContexts must be set before QCoreApplication is created.
QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/tmp/runtime-a-sac-ns-brainvisa'
Qt offscreen does not work.
Cannot allocate an OpenGL context. Using Xvfb if possible.
using DISPLAY=:1
Too dangerous to use VirtualGL: QCoreApplication is instantiated, or GLX is not completely OK, or OpenGL libs are loaded.
Database /casa/host/install/share/brainvisa-share-5.2 must be updated because
there is no database file.

exec: /casa/host/install/python/brainvisa/toolboxes/constellation/startup.py
Database
/casa/host/install/share/constellation-5.2/constellation_atlas_hcp_200s/constellation_matrix
must be updated because some types tables are missing.

Database
/casa/host/install/share/constellation-5.2/constellation_atlas_hcp_200s/freesurfer_gyri
must be updated because some types tables are missing.

exec: /casa/host/install/python/brainvisa/toolboxes/disco/startup.py
exec: /casa/host/install/python/brainvisa/toolboxes/morphologist/startup.py
Generating database tables for /casa/host/install/share/brainvisa-share-5.2

/casa/host/install/share/brainvisa-share-5.2: parse directories and insert
items

Warning: changed uuid of "'/casa/host/install/share/brainvisa-share-5.2/models/models_2008/descriptive_models/segments/global_registered_spam_left/meshes/global_SPAM.referential'" because another file has the same uuid: 5f83f18d-e211-6705-99a0-720c4707901b
/casa/host/install/share/brainvisa-share-5.2: 196 files are stored as 183
DiskItems in 0 seconds

Built target axon_install_shared_index
Initializing brainvisa... (takes a while)...
QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/tmp/runtime-a-sac-ns-brainvisa'


 _Process **Update databases** started on 2025/06/30 06:24_

Generating database tables for
/casa/host/install/share/constellation-5.2/constellation_atlas_hcp_200s/constellation_matrix

 **Clear database:
/casa/host/install/share/constellation-5.2/constellation_atlas_hcp_200s/constellation_matrix**

 **Update database:
/casa/host/install/share/constellation-5.2/constellation_atlas_hcp_200s/constellation_matrix**

/casa/host/install/share/constellation-5.2/constellation_atlas_hcp_200s/constellation_matrix:
parse directories and insert items

/casa/host/install/share/constellation-5.2/constellation_atlas_hcp_200s/constellation_matrix:
276 files are stored as 208 DiskItems in 0 seconds

Generating database tables for
/casa/host/install/share/constellation-5.2/constellation_atlas_hcp_200s/freesurfer_gyri

 **Clear database:
/casa/host/install/share/constellation-5.2/constellation_atlas_hcp_200s/freesurfer_gyri**

 **Update database:
/casa/host/install/share/constellation-5.2/constellation_atlas_hcp_200s/freesurfer_gyri**

/casa/host/install/share/constellation-5.2/constellation_atlas_hcp_200s/freesurfer_gyri:
parse directories and insert items

/casa/host/install/share/constellation-5.2/constellation_atlas_hcp_200s/freesurfer_gyri:
3 files are stored as 3 DiskItems in 0 seconds

  
 _Process **Update databases** finished on 2025/06/30 06:24 (1 seconds)_

Built target constel_install_shared_index
Built target post-install
installing spm12-standalone from /neurospin/brainvisa/thirdparty/spm12-standalone-7771.tar...
---------- Singularity recipe ----------
Bootstrap: localimage
    From: /volatile/a-sac-ns-brainvisa/bbi_nightly/casa-run-5.3-26.sif

%runscript
    export CASA_SYSTEM='ubuntu-22.04'
    export CASA_TYPE='user'
    export CASA_DISTRO='cea'
    export CASA_VERSION='2025-06-30'

    if [ -d /casa/setup ]; then
        /casa/casa-distro/cbin/casa_container setup_user "$@"
    elif [ $# -ne 0 ]; then
        if [ -f /casa/host/install/bin/bv_env ]; then
            # try r/w install
            /usr/local/bin/entrypoint /casa/host/install/bin/bv_env "$@"
        elif [ -f /casa/install/bin/bv_env ]; then
            # otherwise use the builtin (read-only) install in the image
            /usr/local/bin/entrypoint /casa/install/bin/bv_env "$@"
        else
            # fall back to no bv_env if it is missing
            /usr/local/bin/entrypoint "$@"
        fi
    else
        echo 'The Singularity image has been run without arguments, and'
        echo 'without a setup mount point.'
        echo 'This run will do nothing. If you want to setup an environment'
        echo '(install BrainVISA), then you need to specify an'
        echo 'installation directory as a mount point in the /casa/setup'
        echo 'container directory. Typically, to setup into the host '
        echo "directory ~/brainvisa-$CASA_VERSION, run the following commands:"
        echo
        echo "mkdir -p ~/brainvisa-$CASA_VERSION"
        echo "mv "${SINGULARITY_CONTAINER:-$APPTAINER_CONTAINER}""              "~/brainvisa-$CASA_VERSION/"
        echo "cd ~/brainvisa-$CASA_VERSION"
        echo "singularity run -c -B .:/casa/setup"              "${SINGULARITY_NAME:-$APPTAINER_NAME}"
        echo
        echo 'If you have already setup such an environment, you should'
        echo 'run the image using appropriate options, mount points, and'
        echo 'a command to run (bash for instance).'
        echo 'This is normally done using the 'bv' command found in the'
        echo 'bin/ directory of the install environment directory.'
        echo '(the 'bv' command depends only on Python being installed):'
        echo
        echo "~/brainvisa-$CASA_VERSION/bin/bv bash"
        echo
        echo 'Please visit https://brainvisa.info/ for complete help.'
    fi

%setup
    if [ ! -d ${SINGULARITY_ROOTFS}//casa ]; then mkdir -p ${SINGULARITY_ROOTFS}//casa; fi
    cp -a /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/install ${SINGULARITY_ROOTFS}//casa/install
    if [ ! -d ${SINGULARITY_ROOTFS}//usr/local ]; then mkdir -p ${SINGULARITY_ROOTFS}//usr/local; fi
    tar -C ${SINGULARITY_ROOTFS}//usr/local --no-same-owner -xf /neurospin/brainvisa/thirdparty/spm12-standalone-7771.tar
    ln -s spm12-standalone-7771 ${SINGULARITY_ROOTFS}//usr/local/spm12-standalone
    if [ ! -d ${SINGULARITY_ROOTFS}//casa/install/templates/brainvisa ]; then mkdir -p ${SINGULARITY_ROOTFS}//casa/install/templates/brainvisa; fi
    cp -a /volatile/tmp/a-sac-ns-brainvisa/casa_distro_script11vdv2fm/spm.py ${SINGULARITY_ROOTFS}//casa/install/templates/brainvisa/spm.py
    if [ ! -d ${SINGULARITY_ROOTFS}//casa/casa-distro ]; then mkdir -p ${SINGULARITY_ROOTFS}//casa/casa-distro; fi
    cp -a /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/src/development/casa-distro/master/bin ${SINGULARITY_ROOTFS}//casa/casa-distro/bin
    if [ ! -d ${SINGULARITY_ROOTFS}//casa/casa-distro ]; then mkdir -p ${SINGULARITY_ROOTFS}//casa/casa-distro; fi
    cp -a /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/src/development/casa-distro/master/cbin ${SINGULARITY_ROOTFS}//casa/casa-distro/cbin
    if [ ! -d ${SINGULARITY_ROOTFS}//casa/casa-distro ]; then mkdir -p ${SINGULARITY_ROOTFS}//casa/casa-distro; fi
    cp -a /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/src/development/casa-distro/master/python ${SINGULARITY_ROOTFS}//casa/casa-distro/python
    if [ ! -d ${SINGULARITY_ROOTFS}//casa/casa-distro ]; then mkdir -p ${SINGULARITY_ROOTFS}//casa/casa-distro; fi
    cp -a /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/src/development/casa-distro/master/etc ${SINGULARITY_ROOTFS}//casa/casa-distro/etc
    if [ ! -d ${SINGULARITY_ROOTFS}//casa/casa-distro ]; then mkdir -p ${SINGULARITY_ROOTFS}//casa/casa-distro; fi
    cp -a /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/src/development/casa-distro/master/share ${SINGULARITY_ROOTFS}//casa/casa-distro/share

%post
    if [ ! -d "/casa/install/templates/brainvisa" ]; then mkdir -p "/casa/install/templates/brainvisa"; fi
    chmod a+rx "/casa/install/templates/brainvisa/spm.py"
    /casa/install/templates/brainvisa/spm.py
    find /casa/casa-distro -name __pycache__ -o -name '*\.pyc' -o -name '*~' -exec rm -Rf '{}' \;
    if [ -f /casa/install/share/brainvisa-share-*/database-*.sqlite ]; then touch /casa/install/share/brainvisa-share-*/database-*.sqlite; fi
    echo "{\"image_id\": \"fbc32ecb-8576-40f9-b29c-f4768e79505c\"}" > /casa/image_id

%environment
    export SPM_HTML_BROWSER="0"

----------------------------------------
INFO:    Starting build...
INFO:    Verifying bootstrap image /volatile/a-sac-ns-brainvisa/bbi_nightly/casa-run-5.3-26.sif
INFO:    Extracting local image...
INFO:    Running setup scriptlet
+ [ ! -d /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//casa ]
+ cp -a /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/install /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//casa/install
+ [ ! -d /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//usr/local ]
+ tar -C /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//usr/local --no-same-owner -xf /neurospin/brainvisa/thirdparty/spm12-standalone-7771.tar
+ ln -s spm12-standalone-7771 /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//usr/local/spm12-standalone
+ [ ! -d /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//casa/install/templates/brainvisa ]
+ mkdir -p /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//casa/install/templates/brainvisa
+ cp -a /volatile/tmp/a-sac-ns-brainvisa/casa_distro_script11vdv2fm/spm.py /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//casa/install/templates/brainvisa/spm.py
+ [ ! -d /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//casa/casa-distro ]
+ mkdir -p /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//casa/casa-distro
+ cp -a /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/src/development/casa-distro/master/bin /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//casa/casa-distro/bin
+ [ ! -d /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//casa/casa-distro ]
+ cp -a /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/src/development/casa-distro/master/cbin /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//casa/casa-distro/cbin
+ [ ! -d /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//casa/casa-distro ]
+ cp -a /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/src/development/casa-distro/master/python /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//casa/casa-distro/python
+ [ ! -d /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//casa/casa-distro ]
+ cp -a /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/src/development/casa-distro/master/etc /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//casa/casa-distro/etc
+ [ ! -d /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//casa/casa-distro ]
+ cp -a /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/src/development/casa-distro/master/share /volatile/tmp/a-sac-ns-brainvisa/build-temp-2591915097/rootfs//casa/casa-distro/share
INFO:    Running post scriptlet
+ [ ! -d /casa/install/templates/brainvisa ]
+ chmod a+rx /casa/install/templates/brainvisa/spm.py
+ /casa/install/templates/brainvisa/spm.py
<soma.configuration.Configuration object at 0x75c12f94ec50>
+ find /casa/casa-distro -name __pycache__ -o -name *\.pyc -o -name *~ -exec rm -Rf {} ;
+ [ -f /casa/install/share/brainvisa-share-5.2/database-2.3.sqlite ]
+ touch /casa/install/share/brainvisa-share-5.2/database-2.3.sqlite
+ echo {"image_id": "fbc32ecb-8576-40f9-b29c-f4768e79505c"}
INFO:    Adding environment to container
INFO:    Adding runscript
INFO:    Creating SIF file...
INFO:    Build complete: /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3-userimage.sif

Finished: SUCCESS