Started Running as brainvisa ---------------------------------------- $ /usr/bin/python3 /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/src/development/casa-distro/master/bin/casa_distro bv_maker name=cea-master-5.3 -- sources ---------------------------------------- Updating git repository /casa/host/src/aims/aims-free/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/aims/aims-gpl/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/anatomist/anatomist-free/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/anatomist/anatomist-gpl/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/axon/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/brainrat/bioprocessing/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' Using BioProj credentials stored in svn.secret (username 'brainvisa-admin') $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/brainrat/brainrat-gpl/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' Using BioProj credentials stored in svn.secret (username 'brainvisa-admin') $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/brainrat/brainrat-private/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' Using BioProj credentials stored in svn.secret (username 'brainvisa-admin') $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/brainrat/primatologist-gpl/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' Using BioProj credentials stored in svn.secret (username 'brainvisa-admin') $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/brainvisa-share/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/brainvisa-spm/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/capsul/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. $ pre-commit install pre-commit installed at .git/hooks/pre-commit Updating git repository /casa/host/src/constellation/constellation-gpl/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/constellation/constellation-nonfree/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/cortical_surface/brainvisa_freesurfer/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/cortical_surface/cortical_surface-gpl/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/cortical_surface/cortical_surface-nonfree/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/development/brainvisa-cmake/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. $ pre-commit install pre-commit installed at .git/hooks/pre-commit Updating git repository /casa/host/src/development/casa-distro/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. $ pre-commit install pre-commit installed at .git/hooks/pre-commit Updating git repository /casa/host/src/development/neuro-forge/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/main $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/disco/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' Using BioProj credentials stored in svn.secret (username 'brainvisa-admin') $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. $ pre-commit install pre-commit installed at .git/hooks/pre-commit Updating git repository /casa/host/src/highres-cortex/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. $ pre-commit install pre-commit installed at .git/hooks/pre-commit Updating git repository /casa/host/src/morphologist/morpho-deepsulci/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/morphologist/morphologist-gpl/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/morphologist/morphologist-nonfree/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/morphologist/morphologist-ui/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/morphologist/sulci-nonfree/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. Updating git repository /casa/host/src/populse/populse_db/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. $ pre-commit install pre-commit installed at .git/hooks/pre-commit Updating git repository /casa/host/src/soma/soma-base/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. $ pre-commit install pre-commit installed at .git/hooks/pre-commit Updating git repository /casa/host/src/soma/soma-io/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' From https://github.com/brainvisa/soma-io 08d4a82..f4ad69f master -> origin/master $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Updating 08d4a82..f4ad69f Fast-forward src/somaminc/checker/mincformatchecker.cc | 33 ++++++++++++++++++++++++++++++- 1 file changed, 32 insertions(+), 1 deletion(-) Updating git repository /casa/host/src/soma/soma-workflow/master $ git fetch --tags --prune origin '+refs/heads/*:refs/remotes/origin/*' $ git update-ref --no-deref refs/bv_head refs/remotes/origin/master $ git -c remote.origin.skipDefaultUpdate remote update $ git merge --ff-only refs/bv_head Already up to date. $ pre-commit install pre-commit installed at .git/hooks/pre-commit Summary of Git repositories in /casa/host/src ============================================= ┌───── * uncommitted working tree changes │┌──── + uncommitted index changes ││┌─── $ stash present │││┌── % untracked files ││││ ┌ HEAD ││││ │ ┌ update status ││││ │ │ ┌ bv_maker upstream state ││││ │ │ │ ┌ Git upstream state ││││ │ │ │ │┌ Directory master (52179614) ✓ U= aims/aims-free/master master (87e39e9) ✓ U= aims/aims-gpl/master master (fd17b976) ✓ U= anatomist/anatomist-free/master % master (fa70746) ✓ U= anatomist/anatomist-gpl/master master (f997fc8a) ✓ U= axon/master master (bb16881) ✓ U= brainrat/bioprocessing/master master (9a3882e) ✓ U= brainrat/brainrat-gpl/master master (e9670b4) ✓ U= brainrat/brainrat-private/master master (f30acde) ✓ U= brainrat/primatologist-gpl/master master (38f65ef) ✓ U= brainvisa-share/master master (273f2ca) ✓ U= brainvisa-spm/master master (6da7488e) ✓ U= capsul/master master (ea5df9f) ✓ U= constellation/constellation-gpl/master master (ccb3558) ✓ U= constellation/constellation-nonfree/master master (a40875d) ✓ U= cortical_surface/brainvisa_freesurfer/master master (04f5e7e) ✓ U= cortical_surface/cortical_surface-gpl/master master (c20dd90) ✓ U= cortical_surface/cortical_surface-nonfree/master master (6551b6a) ✓ U= development/brainvisa-cmake/master master (ca0f220) ✓ U= development/casa-distro/master main (016fe62) ✓ U= development/neuro-forge/master master (186f84c) ✓ U= disco/master master (a2d6a7d) ✓ U= highres-cortex/master master (e72510d) ✓ U= morphologist/morpho-deepsulci/master master (c4ed6e89) ✓ U= morphologist/morphologist-gpl/master master (c8cf86b) ✓ U= morphologist/morphologist-nonfree/master master (c22bab8) ✓ U= morphologist/morphologist-ui/master master (cb2e0eb) ✓ U= morphologist/sulci-nonfree/master master (38ba8d0) ✓ U= populse/populse_db/master master (93a76d5) ✓ U= soma/soma-base/master master (f4ad69f) ✓ U= soma/soma-io/master master (3e509c1) ✓ U= soma/soma-workflow/master bv_maker summary: OK step sources: /casa/host/src, started: 2025/06/27 06:10, stopped: 2025/06/27 06:10 All went good. Finished: SUCCESS