Started
Running as brainvisa
----------------------------------------
$ /usr/bin/python3 /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/src/development/casa-distro/master/bin/casa_distro bv_maker name=cea-master-5.3 -- doc
----------------------------------------
Building docs in directory: /casa/host/build
$ make -j12 -l12 doc
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Running Sphinx v6.2.1
Running Sphinx v6.2.1
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Running Sphinx v6.2.1
Running Sphinx v6.2.1
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Running Sphinx v6.2.1
Running Sphinx v6.2.1
loading pickled environment... loading pickled environment... done
done
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
loading intersphinx inventory from https://docs.enthought.com/traits/objects.inv...
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 0 source files that are out of date
updating environment: 0 added, 0 changed, 0 removed
reading sources...
looking for now-outdated files... none found
no targets are out of date.
build succeeded.
The HTML pages are in ../../share/doc/soma-workflow-3.3/sphinx.
loading pickled environment... [autosummary] generating autosummary for: api.rst, index.rst
done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.2/sphinx/objects.inv...
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv' not fetchable due to <class 'FileNotFoundError'>: [Errno 2] No such file or directory: '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv'
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/aimsdata-5.2/user_doc/objects.inv...
loading intersphinx inventory from https://docs.python.org/2.7/objects.inv...
loading pickled environment... loading pickled environment... loading pickled environment... done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv...
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WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv' not fetchable due to <class 'FileNotFoundError'>: [Errno 2] No such file or directory: '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv'
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/aimsdata-5.2/user_doc/objects.inv...
loading intersphinx inventory from https://docs.python.org/2.7/objects.inv...
done
loading intersphinx inventory from /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/build/share/doc/soma-base-5.2/sphinx/objects.inv...
loading intersphinx inventory from /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/build/share/doc/pyaims-5.2/sphinx/objects.inv...
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory '/volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/build/share/doc/soma-base-5.2/sphinx/objects.inv' not fetchable due to <class 'FileNotFoundError'>: [Errno 2] No such file or directory: '/volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/build/share/doc/soma-base-5.2/sphinx/objects.inv'
loading intersphinx inventory from /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
loading pickled environment... loading pickled environment... loading pickled environment... done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.3/sphinx/objects.inv...
done
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/aimsdata-5.2/user_doc/objects.inv...
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
[ 4%] Built target soma-workflow-sphinx
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.3/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
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loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
done
[autosummary] generating autosummary for: bv_command.rst, bv_command_help.rst, casa_distro_admin_command.rst, casa_distro_admin_command_help.rst, casa_distro_command.rst, casa_distro_command_help.rst, concepts.rst, developer.rst, index.rst, nightly.rst, technical.rst
building [mo]: targets for 0 po files that are out of date
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reading sources... [ 16%] bv_command
done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.2/sphinx/objects.inv...
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv' not fetchable due to <class 'FileNotFoundError'>: [Errno 2] No such file or directory: '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv'
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/soma-workflow-3.3/sphinx/objects.inv...
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
reading sources... [ 33%] bv_command_help
reading sources... [ 50%] casa_distro_admin_command
reading sources... [ 66%] casa_distro_admin_command_help
[autosummary] generating autosummary for: index.rst
[autosummary] generating autosummary for: index.rst
building [mo]: targets for 0 po files that are out of date
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0 added, 0 changed, 0 removed
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looking for now-outdated files... updating environment: none found
no targets are out of date.
build succeeded, 1 warning.
The HTML pages are in ../../share/doc/soma-io-5.2.
0 added, 0 changed, 0 removed
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build succeeded, 1 warning.
The HTML pages are in ../../share/doc/brainrat-gpl-5.2/user_doc.
Running Sphinx v6.2.1
[autosummary] generating autosummary for: index.rst
[autosummary] generating autosummary for: aims_config.rst, aims_io.rst, changelog.rst, coordinates_systems.rst, formats.rst, index.rst, spm_format.rst, tutorial.rst
building [mo]: targets for 0 po files that are out of date
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building [mo]: targets for 0 po files that are out of date
writing output... build succeeded.
The HTML pages are in ../../share/doc/morphologist-ui-5.2.
building [html]: targets for 0 source files that are out of date
updating environment: 0 added, 0 changed, 0 removed
reading sources...
looking for now-outdated files... none found
no targets are out of date.
build succeeded, 1 warning.
The HTML pages are in ../../../share/doc/aimsdata-5.2/user_doc.
WARNING: Invalid configuration value found: 'language = None'. Update your configuration to a valid language code. Falling back to 'en' (English).
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 0 source files that are out of date
updating environment: 0 added, 0 changed, 0 removed
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no targets are out of date.
build succeeded.
The HTML pages are in ../../share/doc/anatomist-5.2/user_doc.
[NbConvertApp] Converting notebook /casa/host/src/capsul/master/doc/source/tutorial/capsul_tutorial.ipynb.in to notebook
[autosummary] generating autosummary for: axon_manual.rst, axon_manual2.rst, changelog.rst, connectomist_tutorial.rst, index.rst, morphologist_tutorial.rst, tutorial.rst
building [mo]: targets for 0 po files that are out of date
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updating environment: 0 added, 0 changed, 0 removed
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no targets are out of date.
build succeeded, 1 warning.
The HTML pages are in ../../share/doc/axon-5.2/user_doc.
reading sources... [100%] casa_distro_command_help
[ 4%] Built target soma-io-sphinx
loading pickled environment... done
building [mo]: targets for 0 po files that are out of date
writing output...
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reading sources... [100%] populse_db
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 0 source files that are out of date
updating environment: 0 added, 0 changed, 0 removed
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looking for now-outdated files... none found
no targets are out of date.
build succeeded.
The HTML pages are in ../../share/doc/soma-base-5.3/sphinx.
[ 4%] Built target brainrat-gpl-usrsphinx
[ 4%] Generating ../../../../share/doc/graph-5.2/doxygen/index.html
../../../src/development/casa-distro/master/doc/source/bv_command_help.rst:13: WARNING: Option list ends without a blank line; unexpected unindent.
/casa/host/src/development/casa-distro/master/doc/source/bv_command_help.rst:13: WARNING: Option list ends without a blank line; unexpected unindent.
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:40: WARNING: duplicate label casa-distro-admin-help-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:57: WARNING: duplicate label casa-distro-admin-singularity-deb-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:83: WARNING: duplicate label casa-distro-admin-create-base-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:204: WARNING: duplicate label casa-distro-admin-publish-base-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:245: WARNING: duplicate label casa-distro-admin-create-user-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:368: WARNING: duplicate label casa-distro-admin-publish-user-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:394: WARNING: duplicate label casa-distro-admin-bbi-daily-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:530: WARNING: duplicate label casa-distro-admin-local-install-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:576: WARNING: duplicate label casa-distro-admin-convert-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:63: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:117: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:219: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:263: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:383: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:456: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:537: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:580: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:40: WARNING: duplicate label casa-distro-admin-help-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:57: WARNING: duplicate label casa-distro-admin-singularity-deb-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:83: WARNING: duplicate label casa-distro-admin-create-base-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:204: WARNING: duplicate label casa-distro-admin-publish-base-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:245: WARNING: duplicate label casa-distro-admin-create-user-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:368: WARNING: duplicate label casa-distro-admin-publish-user-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:394: WARNING: duplicate label casa-distro-admin-bbi-daily-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:530: WARNING: duplicate label casa-distro-admin-local-install-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:576: WARNING: duplicate label casa-distro-admin-convert-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:63: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:117: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:219: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:263: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:383: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:456: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:537: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:580: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
../../../src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:292: ERROR: Unexpected indentation.
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:40: WARNING: duplicate label casa-distro-help-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:57: WARNING: duplicate label casa-distro-distro-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:65: WARNING: duplicate label casa-distro-list-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:115: WARNING: duplicate label casa-distro-run-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst
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[ 4%] Built target brainvisa-spm-devdoc
[autosummary] generating autosummary for: bv_env.rst, bv_maker.rst, bv_maker_help.rst, bv_maker_help_build.rst, bv_maker_help_configure.rst, bv_maker_help_doc.rst, bv_maker_help_info.rst, bv_maker_help_install_pack.rst, bv_maker_help_pack.rst, bv_maker_help_publish_pack.rst, ..., bv_maker_help_testref.rst, bv_maker_help_testref_pack.rst, cmake_functions.rst, compile_existing.rst, configuration.rst, dependencies.rst, documenting.rst, index.rst, new_project.rst, testing_monitoring.rst
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st/build/include/soma-io/Dicom
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Pa/casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag:1: warning: Internal inconsistency: scope for class carto::conversion::Helper::yes not found!
[ 4%] Built target casa-distro-sphinx
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WARNING: autodoc: failed to import module 'info' from module 'populse_db'; the following exception was raised:
No module named 'populse_db.info'
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done
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[ 4%] Built target neuron-doxygen
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[autosummary] generating autosummary for: api/api.rst, api/attributes.rst, api/engine.rst, api/in_context.rst, api/index.rst, api/info.rst, api/pipeline.rst, api/plugins.rst, api/process.rst, api/qt_apps.rst, ..., api/subprocess.rst, api/utils.rst, documentation.rst, index.rst, installation.rst, status.rst, tutorial/capsul_tutorial.ipynb, user_guide_tree/advanced_usage.rst, user_guide_tree/index.rst, user_guide_tree/xml_spec.rst
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writing output... [ 6%] bv_maker
writing output... [ 66%] modules
rsing file /casa/host/build/include/graph/tree/twriter.h...
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finalizing index lists...
writing tag file...
Running plantuml with JAVA...
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lookup cache used 1246/65536 hits=6093 misses=1714
finished...
done
writing additional pages... search writing output... [ 50%] bv_maker_help_pack
done
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done
copying extra files... done
dumping search index in English (code: en)... writing output... [ 62%] bv_maker_help_sources
done
dumping object inventory... done
build succeeded, 3 warnings.
The HTML pages are in ../../share/doc/populse-db-3.0.
writing output... [ 68%] bv_maker_help_status
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[ 4%] Built target graph-doxygen
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writing output... [100%] index
generating indices... genindex Running Sphinx v6.2.1
done
highlighting module code...
writing additional pages... search done
copying static files... done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded.
The HTML pages are in ../../share/doc/brainvisa-cmake-6.0.
WARNING: html_static_path entry '_static' does not exist
loading pickled environment... done
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.2/sphinx/objects.inv...
[ 4%] Built target populse-db-sphinx
QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/tmp/runtime-a-sac-ns-brainvisa'
[ 4%] Create "share/doc/5.2"
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Running Sphinx v6.2.1
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[ 4%] Built target brainvisa-cmake-usrsphinx
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[ 4%] Create "share/doc/5.2"
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[ 4%] Built target brainvisa_freesurfer-devdoc
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loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
[ 4%] Built target Brainvisa-doc
loading intersphinx inventory from /casa/host/build/share/doc/aimsdata-5.2/user_doc/objects.inv...
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
[ 4%] Built target neuro-forge-doc
[ 4%] Built target brainvisa-share-doc
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 0 source files that are out of date
updating environment: 0 added, 0 changed, 0 removed
reading sources...
looking for now-outdated files... none found
no targets are out of date.
build succeeded, 1 warning.
The HTML pages are in ../../../share/doc/aimsdata-5.2/dev_doc.
[ 4%] Writing documentation to /casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/doc...
[ 4%] Built target aims-gpl-doc
warning: Tag 'SYMBOL_CACHE_SIZE' at line 295 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'SHOW_DIRECTORIES' at line 479 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'COLS_IN_ALPHA_INDEX' at line 750 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'HTML_ALIGN_MEMBERS' at line 805 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'XML_SCHEMA' at line 1142 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'XML_DTD' at line 1148 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'PERL_PATH' at line 1313 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'MSCGEN_PATH' at line 1335 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value
Using the default: a4!
warning: doxygen no longer ships with the FreeSans font.
You may want to clear or change DOT_FONTNAME.
Otherwise you run the risk that the wrong font is being used for dot generated graphs.
warning: source '/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/example' is not a readable file or directory... skipping.
[ 8%] Built target aims-free_target_17
[ 12%] Built target soma-io_target_6
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:500: warning: include file stdint.h not found, perhaps you forgot to add its directory to INCLUDE_PATH?
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1469: warning: Reached end of file while still inside a (nested) comment. Nesting level 2 (probable line reference: 1443, 1437)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:501: warning: missing title after \defgroup NIFTI1_DATATYPES
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:541: warning: missing title after \defgroup NIFTI1_DATATYPE_ALIASES
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:703: warning: missing title after \defgroup NIFTI1_INTENT_CODES
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1189: warning: missing title after \defgroup NIFTI1_XFORM_CODES
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1253: warning: missing title after \defgroup NIFTI1_UNITS
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1394: warning: missing title after \defgroup NIFTI1_SLICE_ORDER
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:36: warning: include file stdint.h not found, perhaps you forgot to add its directory to INCLUDE_PATH?
loading pickled environment... [ 12%] Built target soma-io_target_7
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:40: warning: Compound cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:65: warning: Compound cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:43: warning: Compound cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:67: warning: Compound cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:61: warning: Compound cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:51: warning: Compound cifti::CiftiBrainModelsMap::SurfaceMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:56: warning: Compound cifti::CiftiBrainModelsMap::VolumeMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:102: warning: Compound cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:111: warning: Compound cifti::CiftiFile::WriteImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:42: warning: Compound cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:38: warning: Compound cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:44: warning: Compound cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:47: warning: Compound cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:40: warning: Compound cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:35: warning: Compound cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:37: warning: Compound cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Compact3DLookup.h:37: warning: Compound cifti::Compact3DLookup is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:39: warning: Compound cifti::CompactLookup is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:76: warning: Compound cifti::CompactLookup::const_iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:48: warning: Compound cifti::CompactLookup::iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:37: warning: Compound cifti::ConstFloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:48: warning: Compound cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:39: warning: Compound cifti::Label is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:44: warning: Compound cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MatrixFunctions.h:42: warning: Compound cifti::MatrixFunctions is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:44: warning: Compound cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:40: warning: Compound cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:38: warning: Compound cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:42: warning: Compound cifti::NiftiExtension is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:48: warning: Compound cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:49: warning: Compound cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:97: warning: Compound cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:36: warning: Compound cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:41: warning: Compound cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:35: warning: Compound cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:147: warning: Compound cifti::XmlAttributesResult is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:149: warning: Compound cifti::XmlAttributesResult::OptionalStatus is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.cxx:51: warning: no matching class member found for
void CiftiBrainModelsMap::addSurfaceModel(const int64_t &numberOfNodes, const cifti::StructureEnum::Enum &structure, const vector< int64_t > &nodeList)
Possible candidates:
'void cifti::CiftiBrainModelsMap::addSurfaceModel(const int64_t &numberOfNodes, const StructureEnum::Enum &structure, const float *roi=NULL)'
'void cifti::CiftiBrainModelsMap::addSurfaceModel(const int64_t &numberOfNodes, const StructureEnum::Enum &structure, const std::vector< int64_t > &nodeList)'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.cxx:236: warning: no matching class member found for
void CiftiXML::readXML(const vector< char > &text)
Possible candidates:
'void cifti::CiftiXML::readXML(XmlReader &xml)'
'void cifti::CiftiXML::readXML(const std::vector< char > &text)'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.cxx:60: warning: no matching class member found for
VolumeSpace::VolumeSpace(int64_t[3] dims[3], const vector< vector< float > > &sform)
Possible candidates:
'cifti::VolumeSpace::VolumeSpace()'
'cifti::VolumeSpace::VolumeSpace(const int64_t dims[3], const std::vector< std::vector< float > > &sform)'
'cifti::VolumeSpace::VolumeSpace(const int64_t dims[3], const float sform[12])'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.cxx:70: warning: no matching class member found for
void VolumeSpace::setSpace(int64_t[3] dims[3], const vector< vector< float > > &sform)
Possible candidates:
'void cifti::VolumeSpace::setSpace(const int64_t dims[3], const std::vector< std::vector< float > > &sform)'
'void cifti::VolumeSpace::setSpace(const int64_t dims[3], const float sform[12])'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:217: warning: no matching class member found for
void CiftiFile::getRow(float *dataOut, const vector< int64_t > &indexSelect, const bool &tolerateShortRead) const
Possible candidates:
'void cifti::CiftiFile::getRow(float *dataOut, const std::vector< int64_t > &indexSelect, const bool &tolerateShortRead=false) const'
'void cifti::CiftiFile::getRow(float *dataOut, const int64_t &index, const bool &tolerateShortRead=false) const'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:252: warning: no matching class member found for
void CiftiFile::setRow(const float *dataIn, const vector< int64_t > &indexSelect)
Possible candidates:
'void cifti::CiftiFile::setRow(const float *dataIn, const std::vector< int64_t > &indexSelect)'
'void cifti::CiftiFile::setRow(const float *dataIn, const int64_t &index)'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:330: warning: documented symbol 'CiftiMemoryImpl::CiftiMemoryImpl' was not declared or defined.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:336: warning: no uniquely matching class member found for
void CiftiMemoryImpl::getRow(float *dataOut, const vector< int64_t > &indexSelect, const bool &) const
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:346: warning: no uniquely matching class member found for
void CiftiMemoryImpl::getColumn(float *dataOut, const int64_t &index) const
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:359: warning: no uniquely matching class member found for
void CiftiMemoryImpl::setRow(const float *dataIn, const vector< int64_t > &indexSelect)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:369: warning: no uniquely matching class member found for
void CiftiMemoryImpl::setColumn(const float *dataIn, const int64_t &index)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:382: warning: documented symbol 'CiftiOnDiskImpl::CiftiOnDiskImpl' was not declared or defined.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:427: warning: documented symbol 'CiftiOnDiskImpl::CiftiOnDiskImpl' was not declared or defined.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:458: warning: no uniquely matching class member found for
void CiftiOnDiskImpl::getRow(float *dataOut, const vector< int64_t > &indexSelect, const bool &tolerateShortRead) const
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:463: warning: no uniquely matching class member found for
void CiftiOnDiskImpl::getColumn(float *dataOut, const int64_t &index) const
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:477: warning: no uniquely matching class member found for
void CiftiOnDiskImpl::setRow(const float *dataIn, const vector< int64_t > &indexSelect)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:482: warning: no uniquely matching class member found for
void CiftiOnDiskImpl::setColumn(const float *dataIn, const int64_t &index)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.cxx:51: warning: no matching class member found for
FloatMatrix::FloatMatrix(const vector< vector< float > > &matrixIn)
Possible candidates:
'cifti::FloatMatrix::FloatMatrix()'
'cifti::FloatMatrix::FloatMatrix(const std::vector< std::vector< float > > &matrixIn)'
'cifti::FloatMatrix::FloatMatrix(const int64_t &rows, const int64_t &cols)'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.cxx:281: warning: no matching class member found for
FloatMatrixRowRef::FloatMatrixRowRef(vector< float > &therow)
Possible candidates:
'cifti::FloatMatrixRowRef::FloatMatrixRowRef()'
'cifti::FloatMatrixRowRef::FloatMatrixRowRef(FloatMatrixRowRef &right)'
'cifti::FloatMatrixRowRef::FloatMatrixRowRef(std::vector< float > &therow)'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.cxx:336: warning: no matching class member found for
ConstFloatMatrixRowRef::ConstFloatMatrixRowRef(const vector< float > &therow)
Possible candidates:
'cifti::ConstFloatMatrixRowRef::ConstFloatMatrixRowRef()'
'cifti::ConstFloatMatrixRowRef::ConstFloatMatrixRowRef(const ConstFloatMatrixRowRef &right)'
'cifti::ConstFloatMatrixRowRef::ConstFloatMatrixRowRef(const std::vector< float > &therow)'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.cxx:35: warning: no matching file member found for
XmlAttributesResult cifti::XmlReader_parseAttributes(XmlReader &xml, const vector< AString > &mandatoryNames, const vector< AString > &optionalNames)
Possible candidates:
'XmlAttributesResult XmlReader_parseAttributes(XmlReader &xml, const std::vector< AString > &mandatoryNames, const std::vector< AString > &optionalNames=std::vector< AString >())' at line 162 of file /casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h
[ 12%] Built target aims-free_target_2
[ 12%] Built target aims-free_target_10
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:506: warning: Member DT_NONE (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:507: warning: Member DT_UNKNOWN (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:508: warning: Member DT_BINARY (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:509: warning: Member DT_UNSIGNED_CHAR (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:510: warning: Member DT_SIGNED_SHORT (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:511: warning: Member DT_SIGNED_INT (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:512: warning: Member DT_FLOAT (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:513: warning: Member DT_COMPLEX (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:514: warning: Member DT_DOUBLE (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:515: warning: Member DT_RGB (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:516: warning: Member DT_ALL (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:519: warning: Member DT_UINT8 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:520: warning: Member DT_INT16 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:521: warning: Member DT_INT32 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:522: warning: Member DT_FLOAT32 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:523: warning: Member DT_COMPLEX64 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:524: warning: Member DT_FLOAT64 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:525: warning: Member DT_RGB24 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:528: warning: Member DT_INT8 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:529: warning: Member DT_UINT16 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:530: warning: Member DT_UINT32 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:531: warning: Member DT_INT64 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:532: warning: Member DT_UINT64 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:533: warning: Member DT_FLOAT128 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:534: warning: Member DT_COMPLEX128 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:535: warning: Member DT_COMPLEX256 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:707: warning: Member NIFTI_INTENT_CORREL (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:895: warning: Member NIFTI_INTENT_VECTOR (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1288: warning: Member XYZT_TO_SPACE(xyzt) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1289: warning: Member XYZT_TO_TIME(xyzt) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1292: warning: Member SPACE_TIME_TO_XYZT(ss, tt) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1385: warning: Member DIM_INFO_TO_FREQ_DIM(di) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1386: warning: Member DIM_INFO_TO_PHASE_DIM(di) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1387: warning: Member DIM_INFO_TO_SLICE_DIM(di) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1390: warning: Member FPS_INTO_DIM_INFO(fd, pd, sd) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:306: warning: Member extension[4] (variable) of struct cifti::nifti1_extender is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1399: warning: Member NIFTI_SLICE_UNKNOWN (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1400: warning: Member NIFTI_SLICE_SEQ_INC (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1401: warning: Member NIFTI_SLICE_SEQ_DEC (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1402: warning: Member NIFTI_SLICE_ALT_INC (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1403: warning: Member NIFTI_SLICE_ALT_DEC (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1404: warning: Member NIFTI_SLICE_ALT_INC2 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1405: warning: Member NIFTI_SLICE_ALT_DEC2 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1: warning: Member nifti_1_header (typedef) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1: warning: Member nifti1_extender (typedef) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1: warning: Member nifti1_extension (typedef) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:55: warning: Member nifti_2_header (typedef) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/AString.h:116: warning: Member AString_split(const AString &input, const char &delim) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/AString.h:117: warning: Member AString_split_whitespace(const AString &input) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/AString.h:118: warning: Member AString_toInt(const AString &input, bool &ok) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/AString.h:119: warning: Member AString_toFloat(const AString &input, bool &ok) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:69: warning: Member operator*(const float &left, const Vector3D &right) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:159: warning: Member XmlReader_readElementText(XmlReader &xml) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:160: warning: Member XmlReader_readNextStartElement(XmlReader &xml) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:161: warning: Member XmlReader_elementName(XmlReader &xml) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:162: warning: Member XmlReader_parseAttributes(XmlReader &xml, const std::vector< AString > &mandatoryNames, const std::vector< AString > &optionalNames=std::vector< AString >()) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:163: warning: Member XmlReader_checkEndElement(XmlReader &xml, const AString &elementName) (function) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:506: warning: Member DT_NONE (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:507: warning: Member DT_UNKNOWN (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:508: warning: Member DT_BINARY (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:509: warning: Member DT_UNSIGNED_CHAR (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:510: warning: Member DT_SIGNED_SHORT (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:511: warning: Member DT_SIGNED_INT (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:512: warning: Member DT_FLOAT (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:513: warning: Member DT_COMPLEX (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:514: warning: Member DT_DOUBLE (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:515: warning: Member DT_RGB (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:516: warning: Member DT_ALL (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:519: warning: Member DT_UINT8 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:520: warning: Member DT_INT16 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:521: warning: Member DT_INT32 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:522: warning: Member DT_FLOAT32 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:523: warning: Member DT_COMPLEX64 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:524: warning: Member DT_FLOAT64 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:525: warning: Member DT_RGB24 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:528: warning: Member DT_INT8 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:529: warning: Member DT_UINT16 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:530: warning: Member DT_UINT32 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:531: warning: Member DT_INT64 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:532: warning: Member DT_UINT64 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:533: warning: Member DT_FLOAT128 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:534: warning: Member DT_COMPLEX128 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:535: warning: Member DT_COMPLEX256 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:707: warning: Member NIFTI_INTENT_CORREL (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:895: warning: Member NIFTI_INTENT_VECTOR (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1399: warning: Member NIFTI_SLICE_UNKNOWN (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1400: warning: Member NIFTI_SLICE_SEQ_INC (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1401: warning: Member NIFTI_SLICE_SEQ_DEC (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1402: warning: Member NIFTI_SLICE_ALT_INC (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1403: warning: Member NIFTI_SLICE_ALT_DEC (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1404: warning: Member NIFTI_SLICE_ALT_INC2 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1405: warning: Member NIFTI_SLICE_ALT_DEC2 (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:38: warning: Member NIFTI_INTENT_CONNECTIVITY_UNKNOWN (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:39: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:40: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_TIME (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:41: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_SERIES (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:42: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:43: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_TIME (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:44: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_SERIES (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:45: warning: Member NIFTI_INTENT_CONNECTIVITY_CONNECTIVITY_TRAJECTORY (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:46: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_TRAJECTORY (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:47: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_SCALARS (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:48: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_LABELS (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:49: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_SCALAR (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:50: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_DENSE (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:51: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_PARCELLATED (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:52: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_PARCELLATED_SERIES (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:53: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_PARCELLATED_SCALAR (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:55: warning: Member NIFTI_ECODE_CIFTI (variable) of cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:46: warning: Member ModelType (enumeration) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:74: warning: Member hasVolumeData() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:75: warning: Member hasVolumeData(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:76: warning: Member hasSurfaceData(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:77: warning: Member getIndexForNode(const int64_t &node, const StructureEnum::Enum &structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:78: warning: Member getIndexForVoxel(const int64_t *ijk, StructureEnum::Enum *structureOut=NULL) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:79: warning: Member getIndexForVoxel(const int64_t &i, const int64_t &j, const int64_t &k, StructureEnum::Enum *structureOut=NULL) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:80: warning: Member getInfoForIndex(const int64_t index) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:81: warning: Member getSurfaceMap(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:82: warning: Member getFullVolumeMap() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:83: warning: Member getVolumeStructureMap(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:84: warning: Member getVolumeSpace() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:85: warning: Member getSurfaceNumberOfNodes(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:86: warning: Member getSurfaceStructureList() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:87: warning: Member getVolumeStructureList() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:88: warning: Member getNodeList(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:89: warning: Member getVoxelList(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:90: warning: Member getModelInfo() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:93: warning: Member addSurfaceModel(const int64_t &numberOfNodes, const StructureEnum::Enum &structure, const float *roi=NULL) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:94: warning: Member addSurfaceModel(const int64_t &numberOfNodes, const StructureEnum::Enum &structure, const std::vector< int64_t > &nodeList) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:95: warning: Member addVolumeModel(const StructureEnum::Enum &structure, const std::vector< int64_t > &ijkList) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:96: warning: Member setVolumeSpace(const VolumeSpace &space) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:97: warning: Member clear() (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:99: warning: Member clone() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:100: warning: Member getType() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:101: warning: Member getLength() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:102: warning: Member operator==(const CiftiMappingType &rhs) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:103: warning: Member approximateMatch(const CiftiMappingType &rhs, AString *explanation=NULL) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:104: warning: Member readXML1(XmlReader &xml) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:105: warning: Member readXML2(XmlReader &xml) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:106: warning: Member writeXML1(XmlWriter &xml) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:107: warning: Member writeXML2(XmlWriter &xml) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &type) (function) of class cifti::CiftiMappingType is not documented.
[ 12%] Built target aimsdata-sphinx
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:69: warning: Member m_type (variable) of struct cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:70: warning: Member m_structure (variable) of struct cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:71: warning: Member m_surfaceNode (variable) of struct cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:72: warning: Member m_ijk[3] (variable) of struct cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:63: warning: Member m_type (variable) of struct cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:64: warning: Member m_structure (variable) of struct cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:65: warning: Member m_indexStart (variable) of struct cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:65: warning: Member m_indexCount (variable) of struct cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:53: warning: Member m_ciftiIndex (variable) of struct cifti::CiftiBrainModelsMap::SurfaceMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:54: warning: Member m_surfaceNode (variable) of struct cifti::CiftiBrainModelsMap::SurfaceMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:58: warning: Member m_ciftiIndex (variable) of struct cifti::CiftiBrainModelsMap::VolumeMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:59: warning: Member m_ijk[3] (variable) of struct cifti::CiftiBrainModelsMap::VolumeMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:45: warning: Member getMapMetadata(const int64_t &index) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:46: warning: Member getMapLabelTable(const int64_t &index) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:47: warning: Member getMapName(const int64_t &index) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:49: warning: Member setMapMetadata(const int64_t &index, const MetaData &md) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:50: warning: Member setMapLabelTable(const int64_t &index, const LabelTable <) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:51: warning: Member setMapName(const int64_t &index, const AString &mapName) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:52: warning: Member setLength(const int64_t &length) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:53: warning: Member clear() (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:55: warning: Member clone() const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:56: warning: Member getType() const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:57: warning: Member getLength() const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:58: warning: Member operator==(const CiftiMappingType &rhs) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:59: warning: Member approximateMatch(const CiftiMappingType &rhs, AString *explanation=NULL) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:60: warning: Member readXML1(XmlReader &xml) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:61: warning: Member readXML2(XmlReader &xml) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:62: warning: Member writeXML1(XmlWriter &xml) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:63: warning: Member writeXML2(XmlWriter &xml) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:49: warning: Member clone() const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:50: warning: Member getType() const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:51: warning: Member getLength() const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:52: warning: Member operator==(const CiftiMappingType &rhs) const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:54: warning: Member approximateMatch(const CiftiMappingType &rhs, AString *explanation=NULL) const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:55: warning: Member readXML1(XmlReader &xml)=0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:56: warning: Member readXML2(XmlReader &xml)=0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:57: warning: Member writeXML1(XmlWriter &xml) const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:58: warning: Member writeXML2(XmlWriter &xml) const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:56: warning: Member hasVolumeData() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:57: warning: Member hasSurface(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:58: warning: Member hasSurfaceData(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:59: warning: Member getVolumeSpace() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:60: warning: Member getSurfaceNumberOfNodes(const StructureEnum::Enum &structure) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:61: warning: Member getIndexForNode(const int64_t &node, const StructureEnum::Enum &structure) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:62: warning: Member getIndexForVoxel(const int64_t *ijk) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:63: warning: Member getIndexForVoxel(const int64_t &i, const int64_t &j, const int64_t &k) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:64: warning: Member getParcelSurfaceStructures() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:65: warning: Member getParcels() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:68: warning: Member addSurface(const int64_t &numberOfNodes, const StructureEnum::Enum &structure) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:69: warning: Member setVolumeSpace(const VolumeSpace &space) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:70: warning: Member addParcel(const Parcel &parcel) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:71: warning: Member clear() (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:73: warning: Member clone() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:74: warning: Member getType() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:75: warning: Member getLength() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:76: warning: Member operator==(const CiftiMappingType &rhs) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:77: warning: Member approximateMatch(const CiftiMappingType &rhs, AString *explanation=NULL) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:78: warning: Member readXML1(XmlReader &xml) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:79: warning: Member readXML2(XmlReader &xml) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:80: warning: Member writeXML1(XmlWriter &xml) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:81: warning: Member writeXML2(XmlWriter &xml) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:52: warning: Member operator==(const Parcel &rhs) const (function) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:53: warning: Member operator!=(const Parcel &rhs) const (function) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:54: warning: Member approximateMatch(const Parcel &rhs, AString *explanation=NULL) const (function) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:49: warning: Member m_surfaceNodes (variable) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:50: warning: Member m_voxelIndices (variable) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:51: warning: Member m_name (variable) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:44: warning: Member CiftiScalarsMap(const CiftiScalarsMap &rhs) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:45: warning: Member operator=(const CiftiScalarsMap &rhs) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:46: warning: Member CiftiScalarsMap(const int64_t &length) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:48: warning: Member getMapMetadata(const int64_t &index) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:49: warning: Member getMapName(const int64_t &index) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:51: warning: Member setMapMetadata(const int64_t &index, const MetaData &mdIn) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:52: warning: Member setMapName(const int64_t &index, const AString &mapName) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:53: warning: Member setLength(const int64_t &length) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:54: warning: Member clear() (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:56: warning: Member clone() const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:57: warning: Member getType() const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:58: warning: Member getLength() const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:59: warning: Member operator==(const CiftiMappingType &rhs) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:60: warning: Member approximateMatch(const CiftiMappingType &rhs, AString *explanation=NULL) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:61: warning: Member readXML1(XmlReader &xml) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:62: warning: Member readXML2(XmlReader &xml) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:63: warning: Member writeXML1(XmlWriter &xml) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:64: warning: Member writeXML2(XmlWriter &xml) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:38: warning: Member Unit (enumeration) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:45: warning: Member getStart() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:46: warning: Member getStep() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:47: warning: Member getUnit() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:56: warning: Member CiftiSeriesMap(const int64_t &length, const float &start=0.0f, const float &step=1.0f, const Unit &unit=SECOND) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:63: warning: Member setStart(const float &start) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:64: warning: Member setStep(const float &step) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:65: warning: Member setUnit(const Unit &unit) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:66: warning: Member setLength(const int64_t &length) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:72: warning: Member clone() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:73: warning: Member getType() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:74: warning: Member getLength() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:75: warning: Member operator==(const CiftiMappingType &rhs) const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:84: warning: Member approximateMatch(const CiftiMappingType &rhs, AString *explanation=NULL) const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:101: warning: Member readXML1(XmlReader &xml) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:102: warning: Member readXML2(XmlReader &xml) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:103: warning: Member writeXML1(XmlWriter &xml) const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:104: warning: Member writeXML2(XmlWriter &xml) const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:68: warning: Member stringToUnit(const AString &string, bool &ok) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:69: warning: Member unitToString(const Unit &theUnit) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:70: warning: Member getAllUnits() (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:41: warning: Member getMajor() const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:42: warning: Member getMinor() const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:45: warning: Member CiftiVersion(const int16_t &major, const int16_t &minor) (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:46: warning: Member CiftiVersion(const AString &versionString) (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:47: warning: Member toString() const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:48: warning: Member operator<(const CiftiVersion &rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:49: warning: Member operator>(const CiftiVersion &rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:50: warning: Member operator==(const CiftiVersion &rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:51: warning: Member operator!=(const CiftiVersion &rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:52: warning: Member operator<=(const CiftiVersion &rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:53: warning: Member operator>=(const CiftiVersion &rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:57: warning: Member getNumberOfDimensions() const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:58: warning: Member getParsedVersion() const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:65: warning: Member getFileMetaData() const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:67: warning: Member getMappingType(const int &direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:68: warning: Member getBrainModelsMap(const int &direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:69: warning: Member getBrainModelsMap(const int &direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:70: warning: Member getLabelsMap(const int &direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:71: warning: Member getLabelsMap(const int &direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:72: warning: Member getParcelsMap(const int &direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:73: warning: Member getParcelsMap(const int &direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:74: warning: Member getScalarsMap(const int &direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:75: warning: Member getScalarsMap(const int &direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:76: warning: Member getSeriesMap(const int &direction) const (function) of class cifti::CiftiXML is not documented.
[ 16%] Built target aims-free_target_16
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:77: warning: Member getSeriesMap(const int &direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:78: warning: Member getDimensionLength(const int &direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:79: warning: Member getDimensions() const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:81: warning: Member setNumberOfDimensions(const int &num) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:82: warning: Member setMap(const int &direction, const CiftiMappingType &mapIn) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:83: warning: Member setFileMetaData(const MetaData &mdIn) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:84: warning: Member clear() (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:86: warning: Member readXML(XmlReader &xml) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:87: warning: Member readXML(const std::vector< char > &text) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:89: warning: Member writeXMLToVector(const CiftiVersion &writingVersion=CiftiVersion()) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:90: warning: Member writeXML(XmlWriter &xml, const CiftiVersion &writingVersion=CiftiVersion()) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:96: warning: Member CiftiXML(const CiftiXML &rhs) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:97: warning: Member operator=(const CiftiXML &rhs) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:98: warning: Member operator==(const CiftiXML &rhs) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:99: warning: Member operator!=(const CiftiXML &rhs) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:100: warning: Member approximateMatch(const CiftiXML &rhs) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:82: warning: Member Label(const Label &gl) (function) of class cifti::Label is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:85: warning: Member operator=(const Label &gl) (function) of class cifti::Label is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:95: warning: Member hashCode() (function) of class cifti::Label is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:133: warning: Member matches(const Label &rhs, const bool checkColor=false) const (function) of class cifti::Label is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:49: warning: Member LabelTable(const LabelTable &glt) (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:51: warning: Member operator=(const LabelTable &glt) (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:53: warning: Member matches(const LabelTable &rhs, const bool checkColors=false) const (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:55: warning: Member operator==(const LabelTable &rhs) const (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:57: warning: Member operator!=(const LabelTable &rhs) const (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:148: warning: Member createLabelsForKeys(const std::set< int32_t > &newKeys) (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:150: warning: Member writeXML(XmlWriter &xmlWriter) const (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:152: warning: Member readXml(XmlReader &xml) (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:156: warning: Member getKeys(std::vector< int32_t > &keysOut) const (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:50: warning: Member MetaData(const MetaData &o) (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:52: warning: Member operator=(const MetaData &o) (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:54: warning: Member operator==(const MetaData &rhs) const (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:56: warning: Member operator!=(const MetaData &rhs) const (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:94: warning: Member writeCiftiXML1(XmlWriter &xmlWriter) const (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:95: warning: Member writeCiftiXML2(XmlWriter &xmlWriter) const (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:96: warning: Member readCiftiXML1(XmlReader &xml) (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:97: warning: Member readCiftiXML2(XmlReader &xml) (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:47: warning: Member OrientTypes (enumeration) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:57: warning: Member VolumeSpace(const int64_t dims[3], const std::vector< std::vector< float > > &sform) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:58: warning: Member VolumeSpace(const int64_t dims[3], const float sform[12]) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:59: warning: Member setSpace(const int64_t dims[3], const std::vector< std::vector< float > > &sform) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:60: warning: Member setSpace(const int64_t dims[3], const float sform[12]) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:61: warning: Member getDims() const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:62: warning: Member getSform() const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:63: warning: Member getSpacingVectors(Vector3D &iStep, Vector3D &jStep, Vector3D &kStep, Vector3D &origin) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:64: warning: Member matchesVolumeSpace(const VolumeSpace &right) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:65: warning: Member operator==(const VolumeSpace &right) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:66: warning: Member operator!=(const VolumeSpace &right) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:115: warning: Member indexValid(const T *indexIn) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:129: warning: Member getIndex(const int64_t &indexIn1, const int64_t &indexIn2, const int64_t &indexIn3) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:135: warning: Member getIndex(const T *indexIn) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:140: warning: Member readCiftiXML1(XmlReader &xml) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:141: warning: Member readCiftiXML2(XmlReader &xml) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:142: warning: Member writeCiftiXML1(XmlWriter &xml) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:143: warning: Member writeCiftiXML2(XmlWriter &xml) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:48: warning: Member ENDIAN (enumeration) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:73: warning: Member getCiftiXML() const (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:74: warning: Member isInMemory() const (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:78: warning: Member getDimensions() const (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:89: warning: Member setCiftiXML(const CiftiXML &xml, const bool useOldMetadata=true) (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:90: warning: Member setRow(const float *dataIn, const std::vector< int64_t > &indexSelect) (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:105: warning: Member getRow(float *dataOut, const std::vector< int64_t > &indexSelect, const bool &tolerateShortRead) const =0 (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:106: warning: Member getColumn(float *dataOut, const int64_t &index) const =0 (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:107: warning: Member isInMemory() const (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:114: warning: Member setRow(const float *dataIn, const std::vector< int64_t > &indexSelect)=0 (function) of class cifti::CiftiFile::WriteImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:115: warning: Member setColumn(const float *dataIn, const int64_t &index)=0 (function) of class cifti::CiftiFile::WriteImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:105: warning: Member getRow(float *dataOut, const std::vector< int64_t > &indexSelect, const bool &tolerateShortRead) const =0 (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:106: warning: Member getColumn(float *dataOut, const int64_t &index) const =0 (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:107: warning: Member isInMemory() const (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:103: warning: Member open(const AString &filename, const BinaryFile::OpenMode &opmode) (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:104: warning: Member close() (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:105: warning: Member seek(const int64_t &position) (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:106: warning: Member pos() (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:107: warning: Member read(void *dataOut, const int64_t &count, int64_t *numRead) (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:108: warning: Member write(const void *dataIn, const int64_t &count) (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:72: warning: Member getFilename() const (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:68: warning: Member m_fileName (variable) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:43: warning: Member OpenMode (enumeration) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:56: warning: Member open(const AString &filename, const OpenMode &opmode=READ) (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:57: warning: Member close() (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:58: warning: Member getFilename() const (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:59: warning: Member getOpenForRead() (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:60: warning: Member getOpenForWrite() (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:61: warning: Member seek(const int64_t &position) (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:62: warning: Member pos() (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:63: warning: Member read(void *dataOut, const int64_t &count, int64_t *numRead=NULL) (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:64: warning: Member write(const void *dataIn, const int64_t &count) (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:70: warning: Member open(const AString &filename, const OpenMode &opmode)=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:71: warning: Member close()=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:72: warning: Member getFilename() const (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:73: warning: Member seek(const int64_t &position)=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:74: warning: Member pos()=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:75: warning: Member read(void *dataOut, const int64_t &count, int64_t *numRead)=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:76: warning: Member write(const void *dataIn, const int64_t &count)=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:68: warning: Member m_fileName (variable) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/ByteSwapping.h:43: warning: Member swap(T &toSwap) (function) of class cifti::ByteSwapping is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/ByteSwapping.h:46: warning: Member swapArray(T *toSwap, const uint64_t &count) (function) of class cifti::ByteSwapping is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/ByteSwapping.h:48: warning: Member isBigEndian() (function) of class cifti::ByteSwapping is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:110: warning: Member end() (function) of class cifti::CompactLookup is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:111: warning: Member end() const (function) of class cifti::CompactLookup is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:83: warning: Member operator==(const const_iterator &rhs) const (function) of class cifti::CompactLookup::const_iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:90: warning: Member operator*() (function) of class cifti::CompactLookup::const_iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:96: warning: Member operator->() (function) of class cifti::CompactLookup::const_iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:55: warning: Member operator==(const iterator &rhs) const (function) of class cifti::CompactLookup::iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:62: warning: Member operator*() (function) of class cifti::CompactLookup::iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:68: warning: Member operator->() (function) of class cifti::CompactLookup::iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:42: warning: Member ConstFloatMatrixRowRef(const ConstFloatMatrixRowRef &right) (function) of class cifti::ConstFloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:43: warning: Member ConstFloatMatrixRowRef(const std::vector< float > &therow) (function) of class cifti::ConstFloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:44: warning: Member operator[](const int64_t &index) (function) of class cifti::ConstFloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:53: warning: Member FloatMatrixRowRef(FloatMatrixRowRef &right) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:54: warning: Member FloatMatrixRowRef(std::vector< float > &therow) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:55: warning: Member operator=(const FloatMatrixRowRef &right) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:56: warning: Member operator=(const ConstFloatMatrixRowRef &right) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:57: warning: Member operator=(const float &right) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:58: warning: Member operator[](const int64_t &index) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:73: warning: Member operator[](const int64_t &index) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:74: warning: Member operator[](const int64_t &index) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:75: warning: Member operator+=(const FloatMatrix &right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:76: warning: Member operator-=(const FloatMatrix &right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:77: warning: Member operator*=(const FloatMatrix &right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:78: warning: Member operator+=(const float &right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:79: warning: Member operator-=(const float &right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:80: warning: Member operator*=(const float &right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:81: warning: Member operator/=(const float &right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:82: warning: Member operator+(const FloatMatrix &right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:83: warning: Member operator-(const FloatMatrix &right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:84: warning: Member operator-() const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:85: warning: Member operator*(const FloatMatrix &right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:86: warning: Member operator==(const FloatMatrix &right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:87: warning: Member operator!=(const FloatMatrix &right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:131: warning: Member addVectors(const float v1[3], const float v2[3], float resultOut[3]) (function) of class cifti::MathFunctions is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:261: warning: Member isNaN(const float number) (function) of class cifti::MathFunctions is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:263: warning: Member isPosInf(const float number) (function) of class cifti::MathFunctions is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:265: warning: Member isNegInf(const float number) (function) of class cifti::MathFunctions is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:227: warning: The following parameter of cifti::MathFunctions::arraysEqual(const float a[], const float b[], const int32_t numElements) is not documented:
parameter 'numElements'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:273: warning: The following parameter of cifti::MathFunctions::compareArrays(const float a1[], const float a2[], const int32_t numElements, const float tolerance) is not documented:
parameter 'numElements'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'X' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'coordinate' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'Y' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'coordinate' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'X' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'coordinate' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'Y' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'coordinate' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:121: warning: The following parameters of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2) are not documented:
parameter 'x1'
parameter 'y1'
parameter 'x2'
parameter 'y2'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:79: warning: The following parameter of cifti::MathFunctions::normalizedCrossProduct(const float x1[], const float x2[], float resultOut[]) is not documented:
parameter 'resultOut'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:352: warning: argument 'vectorInOut' of command @param is not found in the argument list of cifti::MathFunctions::normalizeVector(double vector[3])
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:90: warning: The following parameter of cifti::MathFunctions::normalizeVector(double vector[3]) is not documented:
parameter 'vector'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:333: warning: argument 'vectorInOut' of command @param is not found in the argument list of cifti::MathFunctions::normalizeVector(float vector[3])
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:88: warning: The following parameter of cifti::MathFunctions::normalizeVector(float vector[3]) is not documented:
parameter 'vector'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:63: warning: The following parameter of cifti::MathFunctions::normalVectorDirection(const float v1[3], const float v2[3], const float v3[3], float directionOut[3]) is not documented:
parameter 'directionOut'
[ 16%] Built target aims-free_target_14
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:47: warning: Member getDimensions() const (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:49: warning: Member resize(const std::vector< I > &dims) (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:51: warning: Member at(const std::vector< I > &pos) (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:53: warning: Member at(const std::vector< I > &pos) const (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:55: warning: Member get(const int &fullDims, const std::vector< I > &indexSelect) (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:57: warning: Member get(const int &fullDims, const std::vector< I > &indexSelect) const (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:45: warning: Member MultiDimIterator(const std::vector< T > &dimensions) (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:46: warning: Member operator++() (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:47: warning: Member operator++(int) (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:48: warning: Member operator--() (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:49: warning: Member operator--(int) (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:50: warning: Member operator*() const (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:51: warning: Member atEnd() const (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:41: warning: Member dot(const Vector3D &right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:42: warning: Member cross(const Vector3D &right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:43: warning: Member normal(float *origLength=NULL) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:44: warning: Member length() const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:45: warning: Member lengthsquared() const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:48: warning: Member Vector3D(const float &x, const float &y, const float &z) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:49: warning: Member Vector3D(const float *right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:51: warning: Member operator[](const int64_t &index) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:52: warning: Member operator[](const int64_t &index) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:53: warning: Member operator[](const int32_t &index) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:54: warning: Member operator[](const int32_t &index) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:55: warning: Member operator=(const float *right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:57: warning: Member operator+=(const Vector3D &right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:58: warning: Member operator-=(const Vector3D &right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:59: warning: Member operator*=(const float &right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:60: warning: Member operator/=(const float &right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:61: warning: Member operator+(const Vector3D &right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:62: warning: Member operator-(const Vector3D &right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:63: warning: Member operator-() const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:64: warning: Member operator*(const float &right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:65: warning: Member operator/(const float &right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:66: warning: Member operator float *() (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:39: warning: Member VoxelIJK(int64_t i, int64_t j, int64_t k) (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:41: warning: Member VoxelIJK(const T ijk[3]) (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:46: warning: Member operator<(const VoxelIJK &rhs) const (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:54: warning: Member operator==(const VoxelIJK &rhs) const (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:60: warning: Member operator!=(const VoxelIJK &rhs) const (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:37: warning: Member m_ijk[3] (variable) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:155: warning: Member mandatoryVals (variable) of struct cifti::XmlAttributesResult is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:156: warning: Member optionalVals (variable) of struct cifti::XmlAttributesResult is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:152: warning: Member present (variable) of struct cifti::XmlAttributesResult::OptionalStatus is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:153: warning: Member value (variable) of struct cifti::XmlAttributesResult::OptionalStatus is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:306: warning: Member extension[4] (variable) of struct cifti::nifti1_extender is not documented.
[ 24%] Built target aims-free_target_31
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:44: warning: Member m_ecode (variable) of struct cifti::NiftiExtension is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:45: warning: Member m_bytes (variable) of struct cifti::NiftiExtension is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:53: warning: Member read(BinaryFile &inFile) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:54: warning: Member write(BinaryFile &outFile, const int &version=1, const bool &swapEndian=false) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:55: warning: Member canWriteVersion(const int &version) const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:56: warning: Member isSwapped() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:57: warning: Member version() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:59: warning: Member getDimensions() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:60: warning: Member getSForm() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:61: warning: Member getDataOffset() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:62: warning: Member getDataType() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:63: warning: Member getIntentCode() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:64: warning: Member getIntentName() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:65: warning: Member getDataScaling(double &mult, double &offset) const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:66: warning: Member toString() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:68: warning: Member setDimensions(const std::vector< int64_t > &dimsIn) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:69: warning: Member setSForm(const std::vector< std::vector< float > > &sForm) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:70: warning: Member setIntent(const int32_t &code, const char name[16]) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:71: warning: Member setDataType(const int16_t &type) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:72: warning: Member clearDataScaling() (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:73: warning: Member setDataScaling(const double &mult, const double &offset) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:77: warning: Member operator==(const NiftiHeader &rhs) const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:78: warning: Member operator!=(const NiftiHeader &rhs) const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:50: warning: Member m_extensions (variable) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:62: warning: Member openRead(const AString &filename) (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:63: warning: Member writeNew(const AString &filename, const NiftiHeader &header, const int &version=1, const bool &withRead=false, const bool &swapEndian=false) (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:64: warning: Member getFilename() const (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:65: warning: Member overrideDimensions(const std::vector< int64_t > &newDims) (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:66: warning: Member close() (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:67: warning: Member getHeader() const (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:68: warning: Member getDimensions() const (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:69: warning: Member getNumComponents() const (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:73: warning: Member readData(T *dataOut, const int &fullDims, const std::vector< int64_t > &indexSelect, const bool &tolerateShortRead=false) (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:75: warning: Member writeData(const T *dataIn, const int &fullDims, const std::vector< int64_t > &indexSelect) (function) of class cifti::NiftiIO is not documented.
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Reading tag file '/casa/host/build/share/doc/graph-5.2/doxygen/gr[ 40%] Built target cartodata
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:45,481::INFO::Found '14' pipeline(s) in 'morphologist.capsul'.
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Parsing file /casa/host/build/include/aims/utility/boundingbox.h...
Preprocessing /casa/host/build/include/aims/utility/channel.h...
Parsing file /casa/host/build/include/aims/utility/channel.h...
Preprocessing /casa/host/build/include/aims/utility/converter_g.h...
Parsing file /casa/host/build/include/aims/utility/converter_g.h...
Preprocessing /casa/host/build/include/aims/utility/converter_bucket.h...
Parsing file /casa/host/build/include/aims/utility/converter_bucket.h...
Preprocessing /casa/host/build/include/aims/utility/converter_hsv.h...
Parsing file /casa/host/build/include/aims/utility/converter_hsv.h...
Prepr[ 44%] Built target AimsChannelExtract
ocessing /casa/host/build/include/aims/utility/converter_rgb.h...
Parsing file /casa/host/build/include/aims/utility/converter_rgb.h...
Preprocessing /casa/host/build/include/aims/utility/converter_texture.h...
Parsing file /casa/host/build/include/aims/utility/converter_texture.h...
Preprocessing /casa/host/build/include/aims/utility/converter_volume.h...
Parsing file /casa/host/build/include/aims/utility/converter_volume.h...
Preprocessing /casa/host/build/include/aims/utility/clock.h...
Parsing file /casa/host/build/include/aims/utility/clock.h...
Preprocessing /casa/host/build/include/aims/utility/cyclic_iterator.h...
Parsing file /casa/host/build/include/aims/utility/cyclic_iterator.h...
Preprocessing /casa/host/build/include/aims/utility/flip.h...
Parsing file /casa/host/build/include/aims/utility/flip.h...
Preprocessing /casa/host/build/include/aims/utility/linearcomb.h...
Parsing file /casa/host/build/include/aims/utility/linearcomb.h...
Preprocessing /casa/host/build/include/aims/utility/masscenter.h...
Parsing file /casa/host/build/include/aims/utility/masscenter.h...
Preprocessing /casa/host/build/include/aims/utility/merge.h...
Parsing file /casa/host/build/include/aims/utility/merge.h...
Preprocessing /casa/host/build/include/aims/utility/minmax.h...
Parsing file /casa/host/build/include/aims/utility/minmax.h...
Preprocessing /casa/host/build/include/aims/utility/progress.h...
Parsing file /casa/host/build/include/aims/utility/progress.h...
Preprocessing /casa/host/build/include/aims/utility/stl_conversion.h...
Parsing file /casa/host/build/include/aims/utility/stl_conversion.h...
Preprocessing /casa/host/build/include/aims/utility/threshold.h...
Parsing file /casa/host/build/include/aims/utility/threshold.h...
Preprocessing /casa/host/build/include/aims/utility/utility_g.h...
Parsing file /casa/host/build/include/aims/utility/utility_g.h...
Preprocessing /casa/host/build/include/aims/vector/vector.h...
Parsing file /casa/host/build/include/aims/vector/vector.h...
Preprocessing /casa/host/build/include/aims/io/ecatformat.h...
Parsing file /casa/host/build/include/aims/io/ecatformat.h...
Preprocessing /casa/host/build/include/aims/io/ecatformat_d.h...
Parsing file /casa/host/build/include/aims/io/ecatformat_d.h...
Preprocessing /casa/host/build/include/aims/io/ecatheader.h...
Parsing file /casa/host/build/include/aims/io/ecatheader.h...
Preprocessing /casa/host/build/include/aims/io/ecatR.h...
Parsing file /casa/host/build/include/aims/io/ecatR.h...
Preprocessing /casa/host/build/include/aims/io/ecatSinoheader.h...
Parsing file /casa/host/build/include/aims/io/ecatSinoheader.h...
Preprocessing /casa/host/build/include/aims/io/ecatSinoR.h...
Parsing file /casa/host/build/include/aims/io/ecatSinoR.h...
Preprocessing /casa/host/build/include/aims/io/ecatSinoW.h...
Parsing file /casa/host/build/include/aims/io/ecatSinoW.h...
Preprocessing /casa/host/build/include/aims/io/ecatW.h...
Parsing file /casa/host/build/include/aims/io/ecatW.h...
Preprocessing /casa/host/build/include/aims/io/ecatfinderformat.h...
Parsing file /casa/host/build/include/aims/io/ecatfinderformat.h...
Preprocessing /casa/host/build/include/aims/plugin/ecatplugin.h...
Parsing file /casa/host/build/include/aims/plugin/ecatplugin.h...
Preprocessing /casa/host/build/include/aims/sino/sino.h...
Parsing file /casa/host/build/include/aims/sino/sino.h...
Preprocessing /casa/host/build/include/aims/sino/sino_d.h...
Parsing file /casa/host/build/include/aims/sino/sino_d.h...
Preprocessing /casa/host/build/include/aims/io/vidafinderformat.h...
Parsing file /casa/host/build/include/aims/io/vidafinderformat.h...
Preprocessing /casa/host/build/include/aims/io/vidaformat.h...
Parsing file /casa/host/build/include/aims/io/vidaformat.h...
Preprocessing /casa/host/build/include/aims/io/vidaformat_d.h...
Parsing file /casa/host/build/include/aims/io/vidaformat_d.h...
Preprocessing /casa/host/build/include/aims/io/vidaheader.h...
Parsing file /casa/host/build/include/aims/io/vidaheader.h...
Preprocessing /casa/host/build/include/aims/io/vidaR.h...
Parsing file /[ 44%] Built target AimsComposeTransformation
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:45,752::INFO::Pipeline 'morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM.png'.
casa/host/build/include/aims/io/vidaR.h...
Preprocessing /casa/host/build/include/aims/io/vidaW.h...
Parsing file /casa/host/build/include/aims/io/vidaW.h...
Preprocessing /casa/host/build/include/aims/plugin/vidaplugin.h...
Parsing file /casa/host/build/include/aims/plugin/vidaplugin.h...
Preprocessing /casa/host/build/include/aims/io/plyformat.h...
Parsing file /casa/host/build/include/aims/io/plyformat.h...
Preprocessing /casa/host/build/include/aims/io/plyformat_d.h...
Parsing file /casa/host/build/include/aims/io/plyformat_d.h...
Preprocessing /casa/host/build/include/aims/io/plyheader.h...
Parsing file /casa/host/build/include/aims/io/plyheader.h...
Preprocessing /casa/host/build/include/aims/io/plyr.h...
Parsing file /casa/host/build/include/aims/io/plyr.h...
Preprocessing /casa/host/build/include/aims/io/plyw.h...
Parsing file /casa/host/build/include/aims/io/plyw.h...
Preprocessing /casa/host/build/include/aims/io/plyfinderformat.h...
Parsing file /casa/host/build/include/aims/io/plyfinderformat.h...
Preprocessing /casa/host/build/include/aims/plugin/plyplugin.h...
Parsing file /casa/host/build/include/aims/plugin/plyplugin.h...
Preprocessing /casa/host/build/include/aims/rply/rply.h...
Parsing file /casa/host/build/include/aims/rply/rply.h...
Preprocessing /casa/host/build/include/aims/io/fdfformat.h...
Parsing file /casa/host/build/include/aims/io/fdfformat.h...
Preprocessing /casa/host/build/include/aims/io/fdfformat_d.h...
Parsing file /casa/host/build/include/aims/io/fdfformat_d.h...
Preprocessing /casa/host/build/include/aims/io/fdfheader.h...
Parsing file /casa/host/build/include/aims/io/fdfheader.h...
Preprocessing /casa/host/build/include/aims/io/fdfR.h...
Parsing file /casa/host/build/include/aims/io/fdfR.h...
Preprocessing /casa/host/build/include/aims/io/fdffinderformat.h...
Parsing file /casa/host/build/include/aims/io/fdffinderformat.h...
Preprocessing /casa/host/build/include/aims/io/fdfprocpar.h...
Parsing file /casa/host/build/include/aims/io/fdfprocpar.h...
Preprocessing /casa/host/build/include/aims/io/fdfprocpar_g.h...
Parsing file /casa/host/build/include/aims/io/fdfprocpar_g.h...
Preprocessing /casa/host/build/include/aims/io/fdfutil.h...
Parsing file /casa/host/build/include/aims/io/fdfutil.h...
Preprocessing /casa/host/build/include/aims/plugin/fdfplugin.h...
Parsing file /casa/host/build/include/aims/plugin/fdfplugin.h...
Preprocessing /casa/host/build/include/aims/io/jpegformat.h...
Parsing file /casa/host/build/include/aims/io/jpegformat.h...
Preprocessing /casa/host/build/include/aims/io/jpegformat_d.h...
Parsing file /casa/host/build/include/aims/io/jpegformat_d.h...
Preprocessing /casa/host/build/include/aims/io/jpegheader.h...
Parsing file /casa/host/build/include/aims/io/jpegheader.h...
Preprocessing /casa/host/build/include/aims/io/jpegR.h...
Parsing file /casa/host/build/include/aims/io/jpegR.h...
Preprocessing /casa/host/build/include/aims/io/jpegW.h...
Parsing file /casa/host/build/include/aims/io/jpegW.h...
Preprocessing /casa/host/build/include/aims/io/jpegfinderformat.h...
Parsing file /casa/host/build/include/aims/io/jpegfinderformat.h...
Preprocessing /casa/host/build/include/aims/plugin/jpegplugin.h...
Parsing file /casa/host/build/include/aims/plugin/jpegplugin.h...
Preprocessing /casa/host/build/include/aims/io/tiffformat.h...
Parsing file /casa/host/build/include/aims/io/tiffformat.h...
Preprocessing /casa/host/build/include/aims/io/tiffformat_d.h...
Parsing file /casa/host/build/include/aims/io/tiffformat_d.h...
Preprocessing /casa/host/build/include/aims/io/tiffheader.h...
Parsing file /casa/host/build/include/aims/io/tiffheader.h...
Preprocessing /casa/host/build/include/aims/io/tiffR.h...
Parsing file /casa/host/build/include/aims/io/tiffR.h...
Preprocessing /casa/host/build/include/aims/io/tiffW.h...
Parsing file /casa/host/build/include/aims/io/tiffW.h...
Preprocessing /casa/host/build/include/aims/io/tifffinderformat.h...
Parsing file /casa/host/build/include/aims/io/tifffinderformat.h...
Preprocessing /casa/host/build/include/aims/plugin/tiffplugin.h...
Parsin/casa/host/build/include/aims/utility/anytype_reader_details.h:36: warning: the name 'Belongs' supplied as the argument in the \file statement is not an input file
[ 48%] Built target AimsConnectComp
[ 48%] Built target aimsalgo
/casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag:1: warning: Internal inconsistency: scope for class carto::conversion::Helper::yes not found!
/casa/host/build/include/aims/data/cartodatavolume.h:60: warning: the name 'more' supplied as the argument of the \class, \struct, \union, or \include command is not an input file
/casa/host/build/include/aims/data/cartodatavolume.h:62: warning: the name 'classes' supplied as the argument of the \class, \struct, \union, or \include command is not an input file
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:45,803::INFO::Pipeline 'morphologist.capsul.spmnormalization.SPMnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.png'.
[ 48%] Built target AimsFileConvert
[ 48%] Built target AimsFiberOversampler
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:45,839::INFO::Pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.png'.
[ 48%] Built target AimsFileInfo
[ 48%] Built target AimsFlip
done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.2/sphinx/objects.inv...
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv' not fetchable due to <class 'FileNotFoundError'>: [Errno 2] No such file or directory: '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv'
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/aimsdata-5.2/dev_doc/objects.inv...
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
loading intersphinx inventory from https://numpy.org/doc/stable/objects.inv...
[ 48%] Built target AimsGraphComplete
[ 48%] Built target AimsGraphConvert
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:45,891::INFO::Pipeline 'morphologist.capsul.spmnormalization.SPMNormalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMNormalization.png'.
config file : /casa/home/.anatomist/config/settings.cfg
[ 48%] Built target AimsGraphExtractTransformation
[ 48%] Built target AimsGraphMerge
[ 48%] Built target AimsInvertTransformation
[ 48%] Built target AimsMassCenter
[ 48%] Built target AimsMerge2Rgb
[ 48%] Built target AimsMergeLabel
[ 48%] Built target morphologist-ui-sphinx
[ 48%] Built target AimsMeshArea
[ 48%] Built target AimsMeshCut
/casa/host/build/include/aims/border/borderiterator.h:290: warning: no uniquely matching class member found for
template < T >
aims::BorderIterator< T >::const_iterator::const_iterator(const typename aims::BorderIterator< T >::aims::BorderIterator::const_iterator &other)
Possible candidates:
'aims::BorderIterator< T >::const_iterator::const_iterator()' at line 132 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::const_iterator::const_iterator(const const_iterator &other)' at line 134 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::const_iterator::const_iterator(const iterator &other)' at line 136 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::const_iterator::const_iterator(BorderIterator< T > &b, bool end=false)' at line 140 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::const_iterator::const_iterator(BorderIterator< T > &b, const Point4dl ¤t)' at line 142 of file /casa/host/build/include/aims/border/borderiterator.h
/casa/host/build/include/aims/border/borderiterator.h:297: warning: no uniquely matching class member found for
template < T >
aims::BorderIterator< T >::const_iterator::const_iterator(const typename aims::BorderIterator< T >::aims::BorderIterator::iterator &other)
Possible candidates:
'aims::BorderIterator< T >::const_iterator::const_iterator()' at line 132 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::const_iterator::const_iterator(const const_iterator &other)' at line 134 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::const_iterator::const_iterator(const iterator &other)' at line 136 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::const_iterator::const_iterator(BorderIterator< T > &b, bool end=false)' at line 140 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::const_iterator::const_iterator(BorderIterator< T > &b, const Point4dl ¤t)' at line 142 of file /casa/host/build/include/aims/border/borderiterator.h
/casa/host/build/include/aims/border/borderiterator.h:304: warning: no uniquely matching class member found for
template < T >
BorderIterator< T >::const_iterator & aims::BorderIterator< T >::const_iterator::operator=(const typename aims::BorderIterator< T >::aims::BorderIterator::const_iterator &other)
Possible candidates:
'const_iterator & aims::BorderIterator< T >::const_iterator::operator=(const const_iterator &other)' at line 147 of file /casa/host/build/include/aims/border/borderiterator.h
'const_iterator & aims::BorderIterator< T >::const_iterator::operator=(const iterator &other)' at line 149 of file /casa/host/build/include/aims/border/borderiterator.h
/casa/host/build/include/aims/border/borderiterator.h:313: warning: no uniquely matching class member found for
template < T >
BorderIterator< T >::const_iterator & aims::BorderIterator< T >::const_iterator::operator=(const typename aims::BorderIterator< T >::aims::BorderIterator::iterator &other)
Possible candidates:
'const_iterator & aims::BorderIterator< T >::const_iterator::operator=(const const_iterator &other)' at line 147 of file /casa/host/build/include/aims/border/borderiterator.h
'const_iterator & aims::BorderIterator< T >::const_iterator::operator=(const iterator &other)' at line 149 of file /casa/host/build/include/aims/border/borderiterator.h
/casa/host/build/include/aims/border/borderiterator.h:552: warning: no uniquely matching class member found for
template < T >
aims::BorderIterator< T >::iterator::iterator(const typename aims::BorderIterator< T >::aims::BorderIterator::iterator &other)
Possible candidates:
'aims::BorderIterator< T >::iterator::iterator()' at line 213 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::iterator::iterator(const iterator &other)' at line 215 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::iterator::iterator(BorderIterator< T > &b, bool end=false)' at line 219 of file /casa/host/build/include/aims/border/borderiterator.h
'aims::BorderIterator< T >::iterator::iterator(BorderIterator< T > &b, const Point4dl ¤t)' at line 221 of file /casa/host/build/include/aims/border/borderiterator.h
[ 48%] Built target AimsMeshes2Graph
/casa/host/build/include/aims/connectivity/structuring_element.h:94: warning: no uniquely matching class member found for
iterator over Point3dl of the aims::StructuringElement::aims::StructuringElement
/casa/host/build/include/aims/connectivity/structuring_element.h:96: warning: documented symbol 'const_iterator over Point3dl of aims::StructuringElement::the' was not declared or defined.
/casa/host/build/include/aims/connectivity/structuring_element.h:381: warning: documented symbol 'bool matrix x3x3 elements that describe a aims::strel::Connectivity::D' was not declared or defined.
/casa/host/build/include/aims/data/cartodatavolume.h:761: warning: no uniquely matching class member found for
template < T >
AimsData< T >::reference AimsData< T >::operator[](AimsData< T >::size_t n)
Possible candidates:
'reference AimsData< T >::operator[](size_type n)' at line 145 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator[](size_type n) const' at line 146 of file /casa/host/build/include/aims/data/cartodatavolume.h
/casa/host/build/include/aims/data/cartodatavolume.h:770: warning: no uniquely matching class member found for
template < T >
AimsData< T >::const_reference AimsData< T >::operator[](AimsData< T >::size_t n) const
Possible candidates:
'reference AimsData< T >::operator[](size_type n)' at line 145 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator[](size_type n) const' at line 146 of file /casa/host/build/include/aims/data/cartodatavolume.h
/casa/host/build/include/aims/data/cartodatavolume.h:779: warning: no uniquely matching class member found for
template < T >
AimsData< T >::reference AimsData< T >::operator()(AimsData< T >::size_t x, AimsData< T >::size_type y, AimsData< T >::size_type z, AimsData< T >::size_type t)
Possible candidates:
'reference AimsData< T >::operator()(size_type x=0, size_type y=0, size_type z=0, size_type t=0)' at line 147 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(size_type x=0, size_type y=0, size_type z=0, size_type t=0) const' at line 149 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point4d &pt)' at line 151 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point4d &pt) const' at line 152 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point4dl &pt)' at line 153 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point4dl &pt) const' at line 154 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point3d &pt)' at line 155 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point3d &pt) const' at line 156 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point3dl &pt)' at line 157 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point3dl &pt) const' at line 158 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point2d &pt)' at line 159 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point2d &pt) const' at line 160 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point2dl &pt)' at line 161 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point2dl &pt) const' at line 162 of file /casa/host/build/include/aims/data/cartodatavolume.h
/casa/host/build/include/aims/data/cartodatavolume.h:789: warning: no uniquely matching class member found for
template < T >
AimsData< T >::const_reference AimsData< T >::operator()(AimsData< T >::size_t x, AimsData< T >::size_type y, AimsData< T >::size_type z, AimsData< T >::size_type t) const
Possible candidates:
'reference AimsData< T >::operator()(size_type x=0, size_type y=0, size_type z=0, size_type t=0)' at line 147 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(size_type x=0, size_type y=0, size_type z=0, size_type t=0) const' at line 149 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point4d &pt)' at line 151 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point4d &pt) const' at line 152 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point4dl &pt)' at line 153 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point4dl &pt) const' at line 154 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point3d &pt)' at line 155 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point3d &pt) const' at line 156 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point3dl &pt)' at line 157 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point3dl &pt) const' at line 158 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point2d &pt)' at line 159 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point2d &pt) const' at line 160 of file /casa/host/build/include/aims/data/cartodatavolume.h
'reference AimsData< T >::operator()(const Point2dl &pt)' at line 161 of file /casa/host/build/include/aims/data/cartodatavolume.h
'const_reference AimsData< T >::operator()(const Point2dl &pt) const' at line 162 of file /casa/host/build/include/aims/data/cartodatavolume.h
/casa/host/build/include/aims/data/fastAllocationData.h:111: warning: no uniquely matching class member found for
template < T >
const carto::AllocatorContext AimsFastAllocationData< T >::fastAllocatorContext & aims::carto::MemoryAllocator::singleton()
/casa/host/build/include/aims/data/pheader.h:101: warning: no uniquely matching class member found for
template
Object carto::Object::value(const aims::PythonHeader &v)
Possible candidates:
'Object carto::Object::value(const Object &value)' at line 1 of file /casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag
'static Object carto::Object::value()' at line 1 of file /casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag
'static Object carto::Object::value(const T &)' at line 1 of file /casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag
[ 52%] Built target AimsMeshGenerate
[ 52%] Built target AimsMeshTransform
This plugin does not support propagateSizeHints()
[ 52%] Built target AimsOverVolume
/casa/host/build/include/aims/utility/channel.h:122: warning: no uniquely matching class member found for
template < T, U, C >
U ChannelSelector::select(const T &input, const uint8_t)
/casa/host/build/include/aims/utility/channel.h:128: warning: no uniquely matching class member found for
template < T, U, C >
void ChannelSelector::set(T &input, const uint8_t, const U &value)
/casa/host/build/include/aims/utility/channel.h:134: warning: no uniquely matching class member found for
template < U >
U ChannelSelector::select(const AimsRGB &input, const uint8_t channel)
/casa/host/build/include/aims/utility/channel.h:155: warning: no uniquely matching class member found for
template < U >
void ChannelSelector::set(AimsRGB &input, const uint8_t channel, const U &value)
/casa/host/build/include/aims/utility/channel.h:171: warning: no uniquely matching class member found for
template < U >
U ChannelSelector::select(const AimsRGBA &input, const uint8_t channel)
/casa/host/build/include/aims/utility/channel.h:196: warning: no uniquely matching class member found for
template < U >
void ChannelSelector::set(AimsRGBA &input, const uint8_t channel, const U &value)
/casa/host/build/include/aims/utility/channel.h:215: warning: no uniquely matching class member found for
template < U >
U ChannelSelector::select(const AimsHSV &input, const uint8_t channel)
/casa/host/build/include/aims/utility/channel.h:239: warning: no uniquely matching class member found for
template < U >
void ChannelSelector::set(AimsHSV &input, const uint8_t channel, const U &value)
/casa/host/build/include/aims/utility/converter_bucket.h:264: warning: no uniquely matching class member found for
template < INP, OUTP >
void carto::RawConverter< INP, OUTP >::printToVolume(const aims::BucketMap< INP > &in, carto::rc_ptr< Volume< OUTP > > &out, const Point3d &offset) const
/casa/host/build/include/aims/utility/converter_bucket.h:384: warning: no uniquely matching class member found for
template < OUTP >
void carto::RawConverter< OUTP >::printToVolume(const aims::BucketMap< Void > &in, carto::rc_ptr< Volume< OUTP > > &out, const Point3d &offset) const
[ 52%] Built target AimsRemoveNaN
[ 52%] Built target AimsRoiFeatures
[ 52%] Built target AimsSelectLabel
[ 52%] Built target AimsSetMinf
[ 52%] Built target AimsSplitRgb
[ 52%] Built target AimsSubVolume
[ 52%] Built target AimsSumSparseMatrix
[ 52%] Built target AimsTCat
[ 52%] Built target AimsTex2Graph
[ 52%] Built target AimsTex2Vol
[ 52%] Built target AimsThreshold
[ 52%] Built target AimsVectorFieldToMesh
[ 52%] Built target aimstiff
[ 52%] Built target AimsVolumeExtract
[ 52%] Built target AimsBundle2Vol
[ 52%] Built target Aims3DPointCloud
[ 52%] Built target AimsBundleAnalysis
[ 52%] Built target AimsActivPixel2Volume
[ 52%] Built target AimsApplyTransform
[ 52%] Built target AimsAddNoise2Data
[ 52%] Built target AimsApplyVectorField
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
[autosummary] generating autosummary for: index.rst, pyaims_aimsalgo.rst, pyaims_aimsalgo_examples.rst, pyaims_algo.rst, pyaims_api_aims.rst, pyaims_api_aimsalgo.rst, pyaims_examples.rst, pyaims_examples_advanced.rst, pyaims_highlevel.rst, pyaims_lowlevel.rst, pyaims_modules_api.rst, pyaims_tutorial.rst, pyaims_tutorial_nb.ipynb, volume_orientation.ipynb
/casa/host/build/include/aims/mesh/surfacemanip.h:167: warning: Unsupported xml/html tag <region> found
/casa/host/build/include/aims/mesh/surfacemanip.h:175: warning: Unsupported xml/html tag <region> found
[ 52%] Built target AimsBuildDti
[ 52%] Built target AimsBuildIndex
[ 52%] Built target AimsBvalue
[ 52%] Built target AimsChamferDistanceMap
[ 52%] Built target AimsClusterArg
/casa/host/build/include/aims/io/process.h:256: warning: included file AimsFileInfo/fileInfo.cc is not found. Check your EXAMPLE_PATH
[ 52%] Built target AimsConvexHull
[ 52%] Built target AimsT2BasedCorrectionEpi
[ 52%] Built target AimsCorrectionEpi
[ 52%] Built target AimsCreateTexture
[ 52%] Built target AimsCurvature2d
[ 52%] Built target AimsCurvature3d
g file /casa/host/build/include/aims/plugin/tiffplugin.h...
Preprocessing /casa/host/build/include/aims/io/gifti.h...
Parsing file /casa/host/build/include/aims/io/gifti.h...
Preprocessing /casa/host/build/include/aims/io/giftiformat.h...
Parsing file /casa/host/build/include/aims/io/giftiformat.h...
Preprocessing /casa/host/build/include/aims/io/giftimeshformat_d.h...
Parsing file /casa/host/build/include/aims/io/giftimeshformat_d.h...
Preprocessing /casa/host/build/include/aims/io/giftitextureformat_d.h...
Parsing file /casa/host/build/include/aims/io/giftitextureformat_d.h...
Preprocessing /casa/host/build/include/aims/io/giftiheader.h...
Parsing file /casa/host/build/include/aims/io/giftiheader.h...
Preprocessing /casa/host/build/include/aims/io/giftifinderformat.h...
Parsing file /casa/host/build/include/aims/io/giftifinderformat.h...
Preprocessing /casa/host/build/include/aims/io/giftiutil.h...
Parsing file /casa/host/build/include/aims/io/giftiutil.h...
Preprocessing /casa/host/build/include/aims/plugin/giftiplugin.h...
Parsing file /casa/host/build/include/aims/plugin/giftiplugin.h...
Preprocessing /casa/host/build/include/aims/config/config.h...
Parsing file /casa/host/build/include/aims/config/config.h...
Building macro definition list...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Computing nesting relations for classes...
Associating documentation with classes...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
Generating style sheet...
Generating search indices...
Generating example documentation...
Generating docs for example AimsFileInfo/fileInfo.cc...
Generating file sources...
Generating code for file aims/border/borderfiller.h...
Generating code for file aims/border/borderiterator.h...
Generating code for file aims/bucket/bucket.h...
Generating code for file aims/bucket/bucket_g.h...
Generating code for file aims/bucket/bucketgen.h...
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Generating code for file aims/bucket/bucketutil.h...
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Generating code for file aims/bucket/item.h...
Generating code for file aims/bucket/sparsevolume.h...
Generating code for file aims/color/colormap.h...
Generating code for file aims/config/aimsdata_config.h...
Generating code for file aims/config/config.h...
Generating code for file aims/connectivity/component.h...
Generating code for file aims/connectivity/component_d.h...
Generating code for file aims/connectivity/connectivity.h...
Generating code for file aims/connectivity/connectivity_g.h...
Generating code for file aims/connectivity/structuring_eleme[ 52%] Built target AimsCylinder
[ 52%] Built target AimsDanielssonDist
[ 52%] Built target AimsCompareSPMtToPrimalSketch
[ 52%] Built target AimsElevationMap
[ 52%] Built target AimsFrontDistanceMap
[ 52%] Built target AimsFoldArgAtt
[ 52%] Built target AimsGaussianSmoothing
[ 52%] Built target AimsGraphMesh
[ 52%] Built target AimsGaussianSmoothing1d
Process2 execution, a: 0.000000, b: blop
[ 52%] Built target AimsGraphTransferLabels
[ 52%] Built target AimsHippocampicReferential
[ 52%] Built target AimsGTMDump
[ 52%] Built target AimsIcmSpaghetti
nt.h...
Generating code for file aims/curve/curve.h...
Generating code for file aims/data/cartodatavolume.h...
Generating code for file aims/data/data.h...
Generating code for file aims/data/data_g.h...
Generating code for file aims/data/fastAllocationData.h...
Generating code for file aims/data/header.h...
Generating code for file aims/data/headerutil.h...
Generating code for file aims/data/pheader.h...
Generating code for file aims/data/pheader_doc.h...
Generating code for file aims/data/sliceformatheader.h...
Generating code for file aims/data/volumemanip.h...
Generating code for file aims/data/volumeoperators_aims.h...
Generating code for file aims/def/assert.h...
Generating code for file aims/def/def_g.h...
Generating code for file aims/def/general.h...
Generating code for file aims/def/info.h...
Generating code for file aims/def/path.h...
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Generating code for file aims/features/features.h...
Generating code for file aims/features/point_set_features.h...
Generating code for file aims/features/roi_features.h...
Generating code for file aims/features/scalar_set_features.h...
Generating code for file aims/fibers/bundleRegroup.h...
Generating code for file aims/fibers/bundles.h...
Generating code for file aims/fibers/bundles_features.h...
Generating code for file aims/fibers/bundleSampler.h...
Generating code for file aims/fibers/bundlesFusion.h...
Generating code for file aims/fibers/bundlesSlicer.h...
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Generating code for file aims/fibers/mrtrixbundlereader.h...
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Generating code for file aims/getopt/getopt2.h...
Generating code for file aims/getopt/getoptProcess.h...
Generating code for file aims/graph/graphmanip.h...
Generating code for file aims/graph/graphmanip_d.h...
Generating code for file aims/hsv/hsv.h...
Generating code for file aims/io/aimsGraphR.h...
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Generating code for file aims/io/argR.h...
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Generating code for file aims/io/baseFormats_bucket.h...
Generating code for file aims/io/baseFormats_bucket_d.h...
Generating code for file aims/io/baseFormats_cartovolume.h...
Generating code for file aims/io/baseFormats_genericobject.h...
Generating code for file aims/io/baseFormats_graph.h...
Generating code for file aims/io/baseFormats_hierarchy.h...
Generating code for file aims/io/baseFormats_mesh.h...
Generating code for file aims/io/baseFormats_mesh_d.h...
Generating code for file aims/io/baseFormats_sparsematrix.h...
Generating code for file aims/io/baseFormats_syntax.h...
Generating code for file aims/io/baseFormats_texture.h...
Generating code for file aims/io/baseFormats_texture_d.h...
Generating code for file aims/io/baseFormats_volume.h...
Generating code for file aims/io/baseFormats_volume_d.h...
Generating code for file aims/io/bckheader.h...
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Generating code for file aims/io/byteswap.h...
Generating code for file aims/io/channelR.h...
Generating code for file aims/io/cmapR.h...
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Generating code for file aims/io/coarseR.h...
Generating code for file aims/io/datatypecode.h...
Generating code for file aims/io/dbh.h...
Generating code for file aims/io/defaultItemR.h...
Generating code for file aims/io/defaultItemW.h...
Generating code for file aims/io/directory.h...
Generating code for file aims/io/dtitensorItemR.h...
Generating code for file aims/io/dtitensorItemW.h...
Generating code for file aim[ 52%] Built target AimsIcmSpaghettiN
[ 52%] Built target AimsIcosaList
Process2 execution, a: 0.000000, b: yup
[ 52%] Built target AimsImageGLBlobStats
[ 52%] Built target AimsImagePrimalSketch
[ 52%] Built target AimsImageScaleSpace
[ 52%] Built target AimsImageSmoothing
[ 52%] Built target AimsInflate
[ 52%] Built target AimsParameterize2DImageDomain
[ 52%] Built target AimsLightenAtlas
[ 52%] Built target AimsMeanCurvFlow
[ 52%] Built target AimsMask
[ 52%] Built target AimsMedianSmoothing
[ 52%] Built target AimsMerge
[ 52%] Built target AimsSmoothing
s/io/ecatfinderformat.h...
Generating code for file aims/io/ecatformat.h...
Generating code for file aims/io/ecatformat_d.h...
Generating code for file aims/io/ecatheader.h...
Generating code for file aims/io/ecatR.h...
Generating code for file aims/io/ecatSinoheader.h...
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Generating code for file aims/io/fdfformat.h...
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Generating code for file aims/io/fdfheader.h...
Generating code for file aims/io/fdfprocpar.h...
Generating code for file aims/io/fdfprocpar_g.h...
Generating code for file aims/io/fdfR.h...
Generating code for file aims/io/fdfutil.h...
Generating code for file aims/io/fileFormat.h...
Generating code for file aims/io/fileFormat_cartovolume_d.h...
Generating code for file aims/io/fileFormat_d.h...
Generating code for file aims/io/finder.h...
Generating code for file aims/io/finderFormats.h...
Generating code for file aims/io/ge_imageFileOffsets.h...
Generating code for file aims/io/ge_imghdr.h...
Generating code for file aims/io/genesisheader.h...
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Generating code for file aims/io/gifti.h...
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Generating code for file aims/io/giftimeshformat_d.h...
Generating code for file aims/io/giftitextureformat_d.h...
Generating code for file aims/io/giftiutil.h...
Generating code for file aims/io/graphBundlesFormat.h...
Generating code for file aims/io/hieR.h...
Generating code for file aims/io/imasparseheader.h...
Generating code for file aims/io/io_g.h...
Generating code for file aims/io/iooptions.h...
Generating code for file aims/io/itemR.h...
Generating code for file aims/io/itemR_stl.h...
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Generating code for file aims/io/jpegfinderformat.h...
Generating code for file aims/io/jpegformat.h...
Generating code for file aims/io/jpegformat_d.h...
Generating code for file aims/io/jpegheader.h...
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Generating code for file aims/io/labelImage.h...
Generating code for file aims/io/listItemR.h...
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Generating code for file aims/io/macosxbugs.h...
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Generating code for file aims/io/mniobjheader.h...
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Generating code for file aims/io/reader_d.h...
Generating code for file aims/io/readerasobject.h...
Generating code for file aims/io/roiR.h...
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Generating code for file aims/io/selectionr.h...
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Generating code for file aims/io/tifffinderformat.h...
Generating code for file aims/io/tiffformat.h...
Generating code for file aims/iobuilding [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 0 source files that are out of date
updating environment: 0 added, 0 changed, 0 removed
reading sources...
looking for now-outdated files... none found
no targets are out of date.
build succeeded, 1 warning.
The HTML pages are in ../../../../share/doc/pyaims-5.2/sphinx.
[ 52%] Built target AimsMesh2Ascii
[ 52%] Built target AimsMesh2SSGraph
[ 52%] Built target AimsMesh
[ 52%] Built target AimsMesh2Sphere
[ 52%] Built target AimsMeshBlobExtract
[ 52%] Built target AimsMeshAverage
[ 52%] Built target AimsMeshCheckClosed
[ 52%] Built target AimsMeshCC2Arg
[ 52%] Built target AimsMeshBrain
[ 52%] Built target AimsMeshCleaner
[ 52%] Built target AimsMeshConnectedComponent
[ 52%] Built target AimsMeshCurvature
/tiffformat_d.h...
Generating code for file aims/io/tiffheader.h...
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warning: Included by graph for 'aimsdata_config.h' not generated, too many nodes (88), threshold is 50. Consider increasing DOT_GRAPH_MAX_NODES.
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ivity/component.h...
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Gener[ 56%] Built target AimsTensorSNR
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Generating docs for file aims/mes[ 60%] Built target AimsTextureDerivative
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/casa/host/build/include/aims/doc/aimsdata_doc.h:381: warning: explicit link request to 'include' could not be resolved
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/casa/host/build/include/aims/doc/aimsdata_doc.h:384: warning: explicit link request to 'include' could not be resolved
h/texturetools.h...
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Generating doc[ 60%] Built target AimsTextureThreshold
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[ 60%] Built target AimsVol2Tex
/casa/host/build/include/aims/resampling/mask.h:46: warning: The following parameters of aims::mask(const BucketMap< Void > &src, const BucketMap< Void > &m, bool intersect=true) are not documented:
parameter 'src'
parameter 'm'
/casa/host/build/include/aims/border/borderiterator.h:187: warning: argument 'move' of command @param is not found in the argument list of aims::BorderIterator< T >::const_iterator::computeNext(const Point4dl &p) const
[ 60%] Built target AimsZCat
[ 60%] Built target AimsVoronoi
[ 60%] Built target aimsecat
[ 60%] Built target AimsSiemensEPI2Volume
[ 60%] Built target AimsRegisterFFDEstimate
[ 60%] Built target AimsBundleSelectCenter
[ 60%] Built target mkhierarchy-anatomist
QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/tmp/runtime-a-sac-ns-brainvisa'
s for compound AimsColorMapReader...
Generating docs for compound AimsColorMapWriter...
Generating docs for compound AimsData...
Generating docs for nested compound AimsData::Private...
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Generating docs for compound AimsSurface...
Generating docs for compound AimsTexThreshold...
Generating docs for compound AimsThreshold...
Generating docs for compound AimsTimeSurface...
Generating docs for compound ChannelSelector< AimsVector< T, D >, U >...
Generating docs for compound ChannelSelector< carto::VolumeRef< T >, carto::VolumeRef< U > >...
Generating docs for compound COMPLEX...
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Generating docs for namespace aims
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Generating docs for compound aims::SparseVolume< carto::Volume< T > >...
Generating docs for nested compound aims::SparseVolume< carto::Volume< T > >::const_iterator...
Generating docs for nested compound aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage...
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Generating docs for compound aims::ConnectedComponentEngine< carto::VolumeRef< T >, carto::VolumeRef< O > >...
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Generating docs for compound aims::AimsFastAllocationData...
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Generating docs for compound aims::SliceFormatHeader..[ 60%] Built target aimsgui
[ 60%] Built target highres-cortex
/casa/host/build/include/aims/fibers/bundleSampler.h:65: warning: The following parameter of aims::BundleSampler::BundleSampler(float percent, const std::string &bundle_name, const std::string &sampled_bundle_name, int mode) is not documented:
parameter 'sampled_bundle_name'
/casa/host/build/include/aims/fibers/bundleSampler.h:76: warning: The following parameter of aims::BundleSampler::BundleSampler(float percent, const std::string &bundle_name, const std::string &sampled_bundle_name, int mode, bool discarded) is not documented:
parameter 'sampled_bundle_name'
[ 64%] Built target vip
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
[ 64%] Built target brainrat
[ 68%] Built target primatologist
.
Generating docs for compound aims::Path...
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Generating docs for compound aims::PointSetFeatures...
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Generating docs for compo[ 72%] Built target sigraph
[ 72%] Built target constellation
[ 72%] Create "share/doc/5.2"
[ 76%] Built target cortical_surface
[ 76%] Built target AimsReplaceLevel
[ 76%] Built target morphologist-ui-devdoc
[ 76%] Built target AimsRTiff
[ 76%] Built target AimsFovSplit
[ 76%] Built target AimsSumPETFrame
[ 76%] Built target AimsAttributedViewer
und aims::StxFormat...
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Generating docs for compound aims::LabelReader...
Generating docs for compound aims::DefaultItem[ 76%] Built target AimsLabelSelector
/casa/host/build/include/aims/io/spmR.h:79: warning: argument 'border' of command @param is not found in the argument list of aims::SpmReader< T >::read(AimsData< T > &thing, const carto::AllocatorContext &context, carto::Object options)
/casa/host/build/include/aims/io/spmR.h:83: warning: The following parameters of aims::SpmReader::read(AimsData< T > &thing, const carto::AllocatorContext &context, carto::Object options) are not documented:
parameter 'context'
parameter 'options'
[ 76%] Built target ylLaplacian
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
[ 76%] Built target ylIsoCurvature
[ 76%] Built target ylAdvectEuclidean
[ 76%] Built target ylAdvectPath
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
[ 76%] Built target ylAdvectTubes
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:47,472::INFO::Pipeline 'morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.png'.
[ 76%] Built target ylAdvectValues
/casa/host/build/include/aims/mesh/surfacemanip.h:167: warning: Unsupported xml/html tag <region> found
/casa/host/build/include/aims/mesh/surfacemanip.h:175: warning: Unsupported xml/html tag <region> found
/casa/host/build/include/aims/mesh/surfacemanip.h:167: warning: Unsupported xml/html tag <region> found
/casa/host/build/include/aims/mesh/surfacemanip.h:175: warning: Unsupported xml/html tag <region> found
[ 76%] Built target ylPropagateAlongField
[ 76%] Built target ylLabelEachVoxel
Reader< std::list< T > >...
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Generating docs for co[ 76%] Built target ylMergeCortexColumnRegions
[ 76%] Built target ylMakeTraversePseudoAreaMap
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:47,546::INFO::Pipeline 'morphologist.capsul.axon.normalization.Normalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalization.Normalization.png'.
[ 76%] Built target ylUpwindDistance
[ 76%] Built target VipBiasCorrection
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
[ 76%] Built target VipClosing
/casa/host/build/include/aims/utility/progress.h:77: warning: The following parameter of aims::ProgressInfo::ProgressInfo(const T1 min, const T1 max, const T2 progressmin=(T2) 0, const T2 progressmax=(T2) 100, const std::string unit="%%", const int width=3, std::ostream &stream=std::cout) is not documented:
parameter 'stream'
/casa/host/build/include/aims/utility/progress.h:87: warning: The following parameter of aims::ProgressInfo::ProgressInfo(const T1 max, std::ostream &stream=std::cout) is not documented:
parameter 'stream'
[ 76%] Built target VipCovarianceMatrix
[ 76%] Built target VipDeriche
[ 76%] Built target VipDilation
[ 76%] Built target VipDistanceMap
/casa/host/build/include/aims/io/vidaR.h:67: warning: The following parameters of aims::VidaReader::read(AimsData< T > &thing, const carto::AllocatorContext &context, carto::Object options) are not documented:
parameter 'context'
parameter 'options'
[ 76%] Built target VipErosion
mpound aims::NameNodeFilter...
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Generating docs for compound aims::ScannerConf...
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Generating docs for compound aims::JpegFormat...
Generating docs for compound aims::JpegHead[ 76%] Built target VipExtEdge
[ 76%] Built target VipFileDump
[ 84%] Built target anatomist
[ 84%] Built target VipFoetusHomotopicSnake
[ 84%] Built target VipFoldArg
[ 84%] Built target VipFoldArgAtt
/casa/host/build/include/aims/data/cartodatavolume.h:63: warning: End of list marker found without any preceding list items
Could not use Matplotlib: <class 'ImportError'> Cannot load backend 'Qt5Agg' which requires the 'qt' interactive framework, as 'headless' is currently running
Qt offscreen does not work.
Cannot allocate an OpenGL context. Using Xvfb if possible.
using DISPLAY=:3
VirtualGL found.
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 0 source files that are out of date
updating environment: [ 84%] Built target VipGetBrain
[ 84%] Built target VipGetHead
[ 84%] Built target VipGeometry
0 added, 0 changed, 0 removed
reading sources...
looking for now-outdated files... none found
no targets are out of date.
build succeeded.
The HTML pages are in ../../share/doc/axon-5.2/dev_doc.
er...
Generating docs for compound aims::JpegReader...
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Generating docs for compound aims::_convertedNiftiArrayValue...
Generating docs for compound aims::_convertedNiftiArrayValue< AimsVector< U, D > >...
Generating docs for compound aims::GiftiPlugin...
Generating docs for namespace aims::DataManip
Generating docs for namespace aims::detail
Generating docs for compound aims::detail::cyclic_iterator_base...
Generating docs for namespace aims::internal
Generating docs for compound aims::internal::AimsGraphReader_Private...
Generating docs for namespace aims::strel
Generating docs for compound aims::strel::Shape...
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Generating docs for compound aims::strel::ClockWiseCircleXY...
Generating docs for namespace carto
Generating docs for compound carto::DataTypeCode< AimsBucket< T > >...
Generating docs for compound carto::DataTypeCode< aims::BucketMap< T > >...
Generating docs for compound carto::DataTypeCode< AimsData< T > >...
Generating docs for compound carto::Divider< AimsVector< T, D >, U >...
Generating docs for compound carto::AimsDataInfo...
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Generating docs for compound carto::DataTypeCode< AimsTimeSurface< D, T > >...
Generating docs for compound carto::DataTypeCode< AimsTimeSurface< 2, T > >...
Generating docs for compound carto::DataTypeCode< AimsTimeSurface< 4, T > >...
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Generating docs for compound carto::DataTypeCode< aims::SparseMatrix >...
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Generating docs for compound carto::DataTypeCode< aims::AffineTransformation3d >...
Generating docs for compound carto::RawConverter< aims::BucketMap< INP >, aims::BucketMap< OUTP > >...
Generating docs for compound carto::RawConverter< aims::BucketMap< INP >, rc_ptr< Volume< OUTP > > >...
Generating docs for compound carto::RawConverter< aims::BucketMap< INP >, VolumeRef< OUTP > >...
Generating docs for compound carto::RawConverter< aims::BucketMap< Void >, rc_ptr< Volume< OUTP > > >...
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Generating docs for compound carto::RawConverter< rc_ptr< Volume< INP > >, aims::BucketMap< OUTP > >...
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Generating docs for compound carto::RawConverter< rc_ptr< Volume< INP > >, aims::BucketMap< Void > >...
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Generating docs for compound carto::ConverterAllocator< aims::BucketMap< INP >, aims::BucketMap< OUTP > >...
Generating docs for compound carto::ConverterAllocator< aims::BucketMap< INP >, rc_ptr< Volume< OUTP > > >...
Generating docs for compound carto::ConverterAllocator< aims::BucketMap< INP >, VolumeRef< OUTP > >...
Generating docs for compound carto::RawConverter< INP, AimsHSV >...
Generating docs for compound carto::RawConverter< Ai[ 84%] Built target VipGreyStatFromClassif
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msHSV, OUTP >...
Generating docs for compound carto::RawConverter< AimsHSV, AimsRGB >...
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Generating docs for compound carto::RawConverter< AimsRGB, AimsHSV >...
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Generating docs for compound carto::RawConverter< AimsVector< T, D >, AimsRGB >...
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Generating docs for compound carto::RawConverter< AimsVector< T, D >, AimsRGBA >...
Generating docs for compound carto::RawConverter< AimsRGBA, AimsVector< T, D > >...
Generating docs for compound carto::RawConverter< TimeTexture< INP >, TimeTexture< OUTP > >...
Generating docs for compound carto::RawConverter< carto::VolumeRef< INP >, carto::VolumeRef< OUTP > >...
Generating docs for compound carto::Rescaler< carto::VolumeRef< INP >, carto::VolumeRef< OUTP > >...
Generating docs for compound carto::RawConverter< carto::VolumeRef< INP >, carto::VolumeRef< INP > >...
Generating docs for compound carto::ShallowConverter< carto::VolumeRef< INP >, carto::VolumeRef< INP > >...
Generating docs for compound carto::ConverterAllocator< carto::VolumeRef< INP >, carto::VolumeRef< OUTP > >...
Generating docs for compound carto::ConverterAllocator< carto::VolumeRef< INP >, carto::VolumeRef< INP > >...
Generating docs for compound carto::ConverterSwitch< carto::VolumeRef< INP >, carto::VolumeRef< INP >, false >...
Generating docs for compound carto::ConverterSwitch< carto::VolumeRef< INP >, carto::VolumeRef< INP >, true >...
Generating docs for compound carto::SmartConverter< carto::VolumeRef< INP >, carto::VolumeRef< INP > >...
Generating docs for compound carto::Rescaler< VolumeRef< AimsVector< T, D > >, VolumeRef< AimsRGB > >...
Generating docs for compound carto::Rescaler< VolumeRef< AimsRGB >, VolumeRef< AimsVector< T, D > > >...
Generating docs for namespace carto::internal
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Generating docs for namespace soma
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Generating docs for compoQt offscreen does not work.
Cannot allocate an OpenGL context. Using Xvfb if possible.
using DISPLAY=:1
VirtualGL found.
global modules: /casa/host/build/share/anatomist-5.2/python_plugins
home modules: /casa/home/.anatomist/python_plugins
loading module ana_image_math
loading module gradientpalette
loading module statsplotwindow
loading module foldsplit
loading module meshsplit
loading module measure
loading module save_resampled
loading module bsa_proba
loading module paletteViewer
loading module infowindow
loading module palettecontrols
loading module anacontrolmenu
loading module bundles_split_by_cortical_regions
loading module modelGraphs
loading module gltf_io
loading module simple_controls
loading module profilewindow
loading module volumepalettes
loading module valuesplotwindow
loading module selection
loading module histogram
loading module bundles_small_brains
all python modules loaded
Anatomist started.
Using Sphinx-Gallery to convert rst text blocks to markdown for .ipynb files.
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und soma::FsSurfFormatReader...
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finalizing index lists...
writing tag file...
Running plantuml with JAVA...
Running dot...
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finished...
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done
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loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv...
loading intersphinx inventory from https://docs.python.org/3.10/objects.inv...
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv' not fetchable due to <class 'FileNotFoundError'>: [Errno 2] No such file or directory: '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv'
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[autosummary] generating autosummary for: ana_notebook.ipynb, auto_examples/activateaction.rst, auto_examples/addMenuEntry.rst, auto_examples/aimsvolumetest.rst, auto_examples/anaevensimplerviewer.rst, auto_examples/anagraphannotate.rst, auto_examples/anatomistapiTests.rst, auto_examples/bvProcessSocket.rst, auto_examples/control.rst, auto_examples/customcommands.rst, ..., pyanatomist_headless.rst, pyanatomist_howto.rst, pyanatomist_notebook.rst, pyanatomist_pyaims_tutorial.rst, pyanatomist_socket.rst, pyanatomist_threaded.rst, pyanatomist_tutorial.rst, pyanatomist_tutorial_nb.ipynb, pyanatomist_wip.rst, sg_execution_times.rst
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Process2 execution, a: 0.000000, b: blop
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:48,582::INFO::Found '0' pipeline(s) in 'deepsulci.sulci_labeling.capsul'.
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warning: Tag 'DETAILS_AT_TOP' at line 162 of file '/casa/host/build/build_files/aims-free/aimsalgo/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'SHOW_DIRECTORIES' at line 408 of file '/casa/host/build/build_files/aims-free/aimsalgo/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'COLS_IN_ALPHA_INDEX' at line 653 of file '/casa/host/build/build_files/aims-free/aimsalgo/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'HTML_ALIGN_MEMBERS' at line 708 of file '/casa/host/build/build_files/aims-free/aimsalgo/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'XML_SCHEMA' at line 948 of file '/casa/host/build/build_files/aims-free/aimsalgo/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'XML_DTD' at line 954 of file '/casa/host/build/build_files/aims-free/aimsalgo/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'PERL_PATH' at line 1115 of file '/casa/host/build/build_files/aims-free/aimsalgo/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'MSCGEN_PATH' at line 1136 of file '/casa/host/build/build_files/aims-free/aimsalgo/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value
Using the default: a4!
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Doxygen version used: 1.9.1
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/casa/host/build/include/aims/sparsematrix
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Failed to import anatomist.altas_viewer.
Possible hints:
* AttributeError: module 'anatomist' has no attribute 'altas_viewer'
* ModuleNotFoundError: No module named 'anatomist.altas_viewer'
generating gallery...
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computation time summary:
- ../examples/activateaction.py: 0.00 sec 0.0 MB
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- ../examples/texturedrawing.py: 0.00 sec 0.0 MB
- ../examples/volumeMeasures.py: 0.00 sec 0.0 MB
- ../examples/volumetest.py: 0.00 sec 0.0 MB
building [mo]: targets for 0 po files that are out of date
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Preprocessing /casa/host/build/include/aims/estima[ 92%] Built target AimsMaskContour
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Preprocessing [ 92%] Built target AimsMeshMatching
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/casa/host/build/include/aims/information/pdf.h...
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Preprocessing /casa/host/build/include/aims//casa/host/build/include/aims/math/bspline.h:181: warning: unbalanced grouping commands
/casa/host/build/include/aims/math/bspline.h:193: warning: unbalanced grouping commands
[ 92%] Built target AimsRebuildComp
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math/ppca_d.h...
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Preprocessing [ 92%] Built target AimsRgbToHsv
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/casa/host/build/include/aims/moment/triMoment.h...
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Parsing file /casa/host/build/[ 92%] Built target AimsSeparateComp
[ 92%] Built target AimsSubSamplingConservative
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[ 92%] Built target bioCellBoundingBoxesGenerate
include/aims/primalsketch/smoother.h...
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Parsing file /casa/host/build/include/aims/pyramid/meanfunc.h...
Preprocessing /casa/host/build/include/aims/pyramid/medfunc.h...
Parsing file /casa/host/build/include/aims/pyramid/medfunc.h...
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Parsing file /casa/host/build/include/aims/pyramid/pyramid_g.h...
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Parsing file /casa/host/build/include/aims/pyramid/pyramid.h...
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Parsing file /casa/host/build/include/aims/pyramid/pyr-func.h...
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Parsing file /casa/host/build/include/aims/pyramid/convolutionsubsampler.h...
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Preprocessing /casa/host/build/include/aims/pyramid/splinesubsampler.h...
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Preprocessing /casa/host/build/include/aims/pyramid/movingaveragesubsampler.h...
Parsing file /casa/host/build/include/aims/pyramid/movingaveragesubsampler.h...
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Parsing file /casa/host/build/include/aims/pyramid/subsamplingpyramid_d.h...
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Parsing file /casa/host/build/include/aims/registration/block_matching.h...
Preprocessing /casa/host/build/include/aims/registration/block_matching_d.h...
Parsing file /casa/host/build/include/aims/registration/block_matchin[ 92%] Built target bioCellEvaluate
/casa/host/build/include/aims/resampling/masklinresampler.h:100: warning: Found ';' while parsing initializer list! (doxygen could be confused by a macro call without semicolon)
[ 92%] Built target bioClusterStatistics
[ 92%] Built target bioCorrectMissingLabels
[ 92%] Built target bioComponentConnexe
g_d.h...
Preprocessing /casa/host/build/include/aims/registration/displacement_field.h...
Parsing file /casa/host/build/include/aims/registration/displacement_field.h...
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Parsing file /casa/host/build/include/aims/registration/ffd.h...
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Preprocessing /casa/host/build/include/aims/registration/scale_control.h...
Parsing file /casa/host/build/include/aims/registration/scale_control.h...
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Parsing file /casa/host/build/include/aims/registration/transformation_d.h...
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Parsing file /casa/host/build/include/aims/resampling/bucketmapsampler.h...
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Preprocessing /casa/host/build/include/aims/resampling/harmonicCageResampler.h...
Parsing file /casa/host/build/include/aims/resampling/harmonicCageResampler.h...
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Parsing file /casa/host/build/include/aims/resampling/masklinresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/meshToVoxelsResampler.h...
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Preprocessing /casa/host/build/include/aims/resampling/meshToVoxelsResampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/meshToVoxelsResampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/nearestneighborresampler.h...
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Preprocessing /casa/host/build/include/aims/resampling/quadraticresampler.h...
Parsing file /casa/host/build/include/aims/resampling/quadraticresampler.h...
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Parsing file /casa/host/build/include/aims/resampling/quadraticresampler_d.h...
Prepr[ 92%] Built target bioExtractAmyloidLoad
ocessing /casa/host/build/include/aims/resampling/quarticresampler.h...
Parsing file /casa/host/build/include/aims/resampling/quarticresampler.h...
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Preprocessing /casa/host/build/include/aims/resampling/resampling_g.h...
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Parsing file /casa/host/build/include/aims/resampling/resampler.h...
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Parsing file /casa/host/build/include/aims/resampling/resampler_d.h...
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Parsing file /casa/host/build/include/aims/resampling/resamplerfactory_d.h...
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Parsing file /casa/host/build/include/aims/resampling/majoritysubsampling.h...
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Parsing file /casa/host/build/include/aims/resampling/maxsubsampling.h...
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Parsing file /casa/host/build/include/aims/resampling/meansubsampling.h...
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Parsing file /casa/host/build/include/aims/resampling/medianresampler.h...
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Parsing file /casa/host/build/include/aims/resampling/mediansubsampling.h...
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Parsing file /casa/host/build/include/aims/resampling/notnullmeansubsampling.h...
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Parsing file /casa/host/build/include/aims/resampling/notnullmediansubsampling.h...
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Parsing file /casa/host/build/include/aims/resampling/sumsubsampling.h...
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Parsing file /casa/host/build/include/aims/resampling/samplable.h...
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Parsing file /casa/host/build/include/aims/resampling/sampler.h...
Preprocessing /casa/host/build/include/aims/resampling/sixthorderresampler.h...
Parsing file /casa/host/build/include/aims/resampling/sixthorderresampler.h...
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Parsing file /casa/host/build/include/aims/resampling/sixthorderresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/seventhorderresampler.h...
Parsing file /casa/host/build/inclu[ 92%] Built target bioExtractDice
[ 92%] Built target bioMacGetSingleBrain
[ 92%] Built target bioFindCellSeeds
/casa/host/build/include/aims/signalfilter/elementfilterfactory.h:94: warning: File ended in the middle of a comment block! Perhaps a missing \endcode?
[ 92%] Built target bioPrepareData4DlIndiv
de/aims/resampling/seventhorderresampler.h...
Preprocessing /casa/host/build/include/aims/resampling/seventhorderresampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/seventhorderresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/splineresampler.h...
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Parsing file /casa/host/build/include/aims/resampling/splineresampler_d.h...
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Parsing file /casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h...
Preprocessing /casa/host/build/include/aims/resampling/polynomial.h...
Parsing file /casa/host/build/include/aims/resampling/polynomial.h...
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Parsing file /casa/host/build/include/aims/roi/clusterArg.h...
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Preprocessing /casa/host/build/include/aims/roi/roigtm.h...
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Preprocessing /casa/host/build/include/aims/scalespace/bucketblob.h...
Parsing file /casa/host/build/include/aims/scalespace/bucketblob.h...
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Parsing file /casa/host/build/include/aims/scalespace/bucketblob_d.h...
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Parsing file /casa/host/build/include/aims/scalespace/meshBlob.h...
Preprocessing /casa/host/build/include/aims/scalespace/meshDiffuse.h...
Parsing file /casa/host/build/include/aims/scalespace/meshDiffuse.h...
Preprocessing /casa/host/build/include/aims/signalfilter/signalfilter_g.h...
Parsing file /casa/host/build/include/aims/signalfilter/signalfilter_g.h...
Preprocessing /casa/host/build/include/aims/signalfilter/convol.h...
Parsing file /casa/host/build/include/aims/signalfilter/convol.h...
Preprocessing /casa/host/build/include/aims/signalfilter/convolutionfilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/convolutionfilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/convolutionfilter_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/convolutionfilter_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/differencefilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/differencefilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/diffusionSmoother_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/diffusionSmoother_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/diffusionSmoother.h...
Parsing file /casa/host/build/include/aims/signalfilter/diffusionSmoother.h...
Preprocessing /casa/host/build/include/aims/signalfilter/elementfilterfactory.h...
Parsing file /casa/host/build/include/aims/signalfilter/elementfilterfactory.h...
Preprocessing /casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction_element.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction_element.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction_element_rgb.h...
Parsing file /casa/host/build/include/aims[ 92%] Built target bioVoxelFeatures
[ 92%] Built target bioRenumberConnectComp
[ 92%] Built target bioStatDominanceAppli
WARNING: multiple files found for the document "auto_examples/activateaction": ['auto_examples/activateaction.codeobj.json', 'auto_examples/activateaction.rst', 'auto_examples/activateaction.py', 'auto_examples/activateaction.zip', 'auto_examples/activateaction.ipynb']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/activateaction.rst' for the build.
WARNING: multiple files found for the document "auto_examples/addMenuEntry": ['auto_examples/addMenuEntry.rst', 'auto_examples/addMenuEntry.zip', 'auto_examples/addMenuEntry.codeobj.json', 'auto_examples/addMenuEntry.ipynb', 'auto_examples/addMenuEntry.py']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/addMenuEntry.rst' for the build.
WARNING: multiple files found for the document "auto_examples/aimsvolumetest": ['auto_examples/aimsvolumetest.rst', 'auto_examples/aimsvolumetest.ipynb', 'auto_examples/aimsvolumetest.py', 'auto_examples/aimsvolumetest.py.md5']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/aimsvolumetest.rst' for the build.
WARNING: multiple files found for the document "auto_examples/anaevensimplerviewer": ['auto_examples/anaevensimplerviewer.ipynb', 'auto_examples/anaevensimplerviewer.rst', 'auto_examples/anaevensimplerviewer.py.md5', 'auto_examples/anaevensimplerviewer.py']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/anaevensimplerviewer.rst' for the build.
WARNING: multiple files found for the document "auto_examples/anagraphannotate": ['auto_examples/anagraphannotate.ipynb', 'auto_examples/anagraphannotate.rst', 'auto_examples/anagraphannotate.py', 'auto_examples/anagraphannotate.py.md5']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/anagraphannotate.rst' for the build.
WARNING: multiple files found for the document "auto_examples/anatomistapiTests": ['auto_examples/anatomistapiTests.py', 'auto_examples/anatomistapiTests.ipynb', 'auto_examples/anatomistapiTests.zip', 'auto_examples/anatomistapiTests.codeobj.json', 'auto_examples/anatomistapiTests.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/anatomistapiTests.rst' for the build.
WARNING: multiple files found for the document "auto_examples/bvProcessSocket": ['auto_examples/bvProcessSocket.rst', 'auto_examples/bvProcessSocket.ipynb', 'auto_examples/bvProcessSocket.zip', 'auto_examples/bvProcessSocket.codeobj.json', 'auto_examples/bvProcessSocket.py']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/bvProcessSocket.rst' for the build.
WARNING: multiple files found for the document "auto_examples/control": ['auto_examples/control.py.md5', 'auto_examples/control.ipynb', 'auto_examples/control.xpm', 'auto_examples/control.py', 'auto_examples/control.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/control.rst' for the build.
WARNING: multiple files found for the document "auto_examples/customcommands": ['auto_examples/customcommands.rst', 'auto_examples/customcommands.codeobj.json', 'auto_examples/customcommands.py', 'auto_examples/customcommands.ipynb', 'auto_examples/customcommands.zip']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/customcommands.rst' for the build.
WARNING: multiple files found for the document "auto_examples/customopenglobject": ['auto_examples/customopenglobject.rst', 'auto_examples/customopenglobject.py.md5', 'auto_examples/customopenglobject.ipynb', 'auto_examples/customopenglobject.py']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/customopenglobject.rst' for the build.
WARNING: multiple files found for the document "auto_examples/ellipsoid": ['auto_examples/ellipsoid.ipynb', 'auto_examples/ellipsoid.rst', 'auto_examples/ellipsoid.py', 'auto_examples/ellipsoid.py.md5']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/ellipsoid.rst' for the build.
WARNING: multiple files found for the document "auto_examples/events": ['auto_examples/events.py', 'auto_examples/events.zip', 'auto_examples/events.codeobj.json', 'auto_examples/events.ipynb', 'auto_examples/events.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/events.rst' for the build.
WARNING: multiple files found for the document "auto_examples/fusion": ['auto_examples/fusion.ipynb', 'auto_examples/fusion.rst', 'auto_examples/fusion.py', 'auto_examples/fusion.codeobj.json', 'auto_examples/fusion.zip']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/fusion.rst' for the build.
WARNING: multiple files found for the document "auto_examples/fusion3D": ['auto_examples/fusion3D.ipynb', 'auto_examples/fusion3D.py.md5', 'auto_examples/fusion3D.py', 'auto_examples/fusion3D.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/fusion3D.rst' for the build.
WARNING: multiple files found for the document "auto_examples/graph": ['auto_examples/graph.ipynb', 'auto_examples/graph.py', 'auto_examples/graph.py.md5', 'auto_examples/graph.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/graph.rst' for the build.
WARNING: multiple files found for the document "auto_examples/graph_building": ['auto_examples/graph_building.ipynb', 'auto_examples/graph_building.py', 'auto_examples/graph_building.py.md5', 'auto_examples/graph_building.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/graph_building.rst' for the build.
WARNING: multiple files found for the document "auto_examples/meshtest": ['auto_examples/meshtest.py', 'auto_examples/meshtest.rst', 'auto_examples/meshtest.py.md5', 'auto_examples/meshtest.ipynb']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/meshtest.rst' for the build.
WARNING: multiple files found for the document "auto_examples/nomenclatureselection": ['auto_examples/nomenclatureselection.rst', 'auto_examples/nomenclatureselection.py.md5', 'auto_examples/nomenclatureselection.py', 'auto_examples/nomenclatureselection.ipynb']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/nomenclatureselection.rst' for the build.
WARNING: multiple files found for the document "auto_examples/selection": ['auto_examples/selection.rst', 'auto_examples/selection.py.md5', 'auto_examples/selection.ipynb', 'auto_examples/selection.py']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/selection.rst' for the build.
WARNING: multiple files found for the document "auto_examples/sphere": ['auto_examples/sphere.zip', 'auto_examples/sphere.py', 'auto_examples/sphere.ipynb', 'auto_examples/sphere.codeobj.json', 'auto_examples/sphere.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/sphere.rst' for the build.
WARNING: multiple files found for the document "auto_examples/texturedrawing": ['auto_examples/texturedrawing.py', 'auto_examples/texturedrawing.ipynb', 'auto_examples/texturedrawing.codeobj.json', 'auto_examples/texturedrawing.zip', 'auto_examples/texturedrawing.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/texturedrawing.rst' for the build.
WARNING: multiple files found for the document "auto_examples/volumeMeasures": ['auto_examples/volumeMeasures.ipynb', 'auto_examples/volumeMeasures.py', 'auto_examples/volumeMeasures.codeobj.json', 'auto_examples/volumeMeasures.rst', 'auto_examples/volumeMeasures.zip']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/volumeMeasures.rst' for the build.
WARNING: multiple files found for the document "auto_examples/volumetest": ['auto_examples/volumetest.py.md5', 'auto_examples/volumetest.py', 'auto_examples/volumetest.rst', 'auto_examples/volumetest.ipynb']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/volumetest.rst' for the build.
/casa/host/build/python/anatomist/cpp/followerobject.py:docstring of anatomist.cpp.followerobject:6: WARNING: Inline literal start-string without end-string.
WARNING: autodoc: failed to import module 'altas_viewer' from module 'anatomist'; the following exception was raised:
No module named 'anatomist.altas_viewer'
looking for now-outdated files... none found
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Parsing file /casa/host/build/inc/casa/host/build/include/aims/signalfilter/linearfilterfactory.h:76: warning: File ended in the middle of a comment block! Perhaps a missing \endcode?
[ 92%] Built target AimsAdaptiveGaussianSmoothing
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Parsing[ 92%] Built target AimsEdgeExtract
[ 92%] Built target AimsRegionGrowingExtrema
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[ 92%] Generating ../../../share/doc/anatomist-5.2/doxygen/index.html
[ 92%] Create "share/doc/5.2"
/casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag:1: warning: Internal inconsistency: scope for class carto::conversion::Helper::yes not found!
[ 92%] Built target bioVoxelWiseStatistics
[ 92%] Built target axon-devdoc
warning: Tag 'DETAILS_AT_TOP' at line 162 of file '/casa/host/build/build_files/anatomist-free/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'SHOW_DIRECTORIES' at line 408 of file '/casa/host/build/build_files/anatomist-free/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'COLS_IN_ALPHA_INDEX' at line 653 of file '/casa/host/build/build_files/anatomist-free/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
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To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
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To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
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To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
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To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'MSCGEN_PATH' at line 1136 of file '/casa/host/build/build_files/anatomist-free/doxygen/Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value
Using the default: a4!
[100%] Built target bv_commands_doc
Doxygen version used: 1.9.1
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Searching for example files...
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Reading and parsing tag files
Reading tag file '/casa/host/build/share/doc/aimsgui-5.2/doxygen/done
checking consistency... /casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/pyanatomist_addons.rst: WARNING: document isn't included in any toctree
done
preparing documents... done
writing output... [ 50%] index
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_iterator::const_iterator()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_iterator::const_iterator(carto::VolumeRef< T > vol, int y, int z, int t)
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_iterator::const_iterator(iterator other)
<unknown>:1: warning: no uniquely matching class member found for
const std::pair< Point4d, const_LowLevelStorage > & aims::SparseVolume< carto::Volume< T > >::const_iterator::operator*() const
<unknown>:1: warning: no uniquely matching class member found for
const std::pair< Point4d, const_LowLevelStorage > * aims::SparseVolume< carto::Volume< T > >::const_iterator::operator->() const
<unknown>:1: warning: documented symbol 'const const_LowLevelStorage & aims::SparseVolume< carto::Volume< T > >::const_iterator::storage' was not declared or defined.
<unknown>:1: warning: no uniquely matching class member found for
bool aims::SparseVolume< carto::Volume< T > >::const_iterator::operator==(const const_iterator &x) const
<unknown>:1: warning: no uniquely matching class member found for
bool aims::SparseVolume< carto::Volume< T > >::const_iterator::operator!=(const const_iterator &x) const
<unknown>:1: warning: no uniquely matching class member found for
const_iterator & aims::SparseVolume< carto::Volume< T > >::const_iterator::operator++()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::const_LowLevelStorage()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::const_LowLevelStorage(const carto::VolumeRef< T > vol, int y, int z, int t)
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::const_LowLevelStorage(const LowLevelStorage &other)
<unknown>:1: warning: no uniquely matching class member found for
const_iterator aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::begin() const
<unknown>:1: warning: no uniquely matching class member found for
const_iterator aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::end() const
<unknown>:1: warning: no uniquely matching class member found for
carto::VolumeRef< T > aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::volume() const
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::iterator::iterator()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::iterator::iterator(carto::VolumeRef< T > vol, int y, int z, int t)
<unknown>:1: warning: no uniquely matching class member found for
std::pair< Point4d, LowLevelStorage > & aims::SparseVolume< carto::Volume< T > >::iterator::operator*()
<unknown>:1: warning: no uniquely matching class member found for
std::pair< Point4d, LowLevelStorage > * aims::SparseVolume< carto::Volume< T > >::iterator::operator->()
<unknown>:1: warning: documented symbol 'LowLevelStorage & aims::SparseVolume< carto::Volume< T > >::iterator::storage' was not declared or defined.
<unknown>:1: warning: no uniquely matching class member found for
bool aims::SparseVolume< carto::Volume< T > >::iterator::operator==(const iterator &x) const
<unknown>:1: warning: no uniquely matching class member found for
bool aims::SparseVolume< carto::Volume< T > >::iterator::operator!=(const iterator &x) const
<unknown>:1: warning: no uniquely matching class member found for
iterator & aims::SparseVolume< carto::Volume< T > >::iterator::operator++()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::LowLevelStorage()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::LowLevelStorage(carto::VolumeRef< T > vol, int y, int z, int t)
<unknown>:1: warning: no uniquely matching class member found for
iterator aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::begin()
<unknown>:1: warning: no uniquely matching class member found for
const_iterator aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::begin() const
<unknown>:1: warning: no uniquely matching class member found for
iterator aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::end()
<unknown>:1: warning: no uniquely matching class member found for
const_iterator aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::end() const
<unknown>:1: warning: no uniquely matching class member found for
carto::VolumeRef< T > aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::volume() const
aimsgui.tag', location '../../aimsgui-5.2/doxygen'...
Reading tag file '/casa/host/build/share/doc/aimsdata-5.2/doxygen/aimsdata.tag', location '../../aimsdata-5.2/doxygen'...
Reading tag file '/casa/host/build/share/doc/graph-5.2/doxygen/graph.tag', location '../../graph-5.2/doxygen'...
Reading tag file '/casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag', location '../../cartobase-5.2/doxygen'...
Reading tag file '/casa/host/build/share/doc/soma-io-5.2/doxygen/soma-io.tag', location '../../cartobase-5.2/doxygen'...
Reading tag file '/casa/host/build/share/doc/cartodata-5.2/doxygen/cartodata.tag', location '../../cartodata-5.2/doxygen'...
Parsing files
Preprocessing /casa/host/build/include/anatomist/application/anatomistinfo.h...
Parsing file /casa/host/build/include/anatomist/application/anatomistinfo.h...
Preprocessing /casa/host/build/include/anatomist/application/Anatomist.h...
Parsing file /casa/host/build/include/anatomist/application/Anatomist.h...
Preprocessing /casa/host/build/include/anatomist/application/globalConfig.h...
Parsing file /casa/host/build/include/anatomist/application/globalConfig.h...
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Parsing file /casa/host/build/include/anatomist/application/localConfig.h...
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Parsing file /casa/host/build/include/anatomist/application/settings.h...
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Parsing file /casa/host/build/include/anatomist/application/module.h...
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Parsing file /casa/host/build/include/anatomist/application/syntax.h...
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Parsing file /casa/host/build/include/anatomist/application/listDir.h...
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Parsing file /casa/host/build/include/anatomist/application/anatomist_doc.h...
Preprocessing /casa/host/build/include/anatomist/browser/browsercontrol.h...
Parsing file /casa/host/build/include/anatomist/browser/browsercontrol.h...
Preprocessing /casa/host/build/include/anatomist/browser/labeledit.h...
Parsing file /casa/host/build/include/anatomist/browser/labeledit.h...
Preprocessing /casa/host/build/include/anatomist/browser/attributedchooser.h...
Parsing file /casa/host/build/include/anatomist/browser/attributedchooser.h...
Preprocessing /casa/host/build/include/anatomist/browser/stringEdit.h...
Parsing file /casa/host/build/include/anatomist/browser/stringEdit.h...
Preprocessing /casa/host/build/include/anatomist/browser/attDescr.h...
Parsing file /casa/host/build/include/anatomist/browser/attDescr.h...
Preprocessing /casa/host/build/include/anatomist/browser/qObjBrowserWid.h...
Parsing file /casa/host/build/include/anatomist/browser/qObjBrowserWid.h...
Preprocessing /casa/host/build/include/anatomist/browser/qwObjectBrowser.h...
Parsing file /casa/host/build/include/anatomist/browser/qwObjectBrowser.h...
Preprocessing /casa/host/build/include/anatomist/bucket/Bucket.h...
Parsing file /casa/host/build/include/anatomist/bucket/Bucket.h...
Preprocessing /casa/host/build/include/anatomist/color/colortraits.h...
Parsing file /casa/host/build/include/anatomist/color/colortraits.h...
Preprocessing /casa/host/build/include/anatomist/color/minipalette.h...
Parsing file /casa/host/build/include/anatomist/color/minipalette.h...
Preprocessing /casa/host/build/include/anatomist/color/qwObjPalette.h...
Parsing file /casa/host/build/include/anatomist/color/qwObjPalette.h...
Preprocessing /casa/host/build/include/anatomist/color/objectPalette.h...
Parsing file /casa/host/build/include/anat/casa/host/build/include/aims/histogram/cumulated.h:72: warning: member doit belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/histogram/cumulated.h:83: warning: member doit belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/histogram/cumulated.h:105: warning: member valueForPercentage belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:457: warning: member X belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:506: warning: member Y belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:539: warning: member Z belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:572: warning: member T belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:607: warning: member XX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:612: warning: member XY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:617: warning: member XZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:622: warning: member XT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:628: warning: member YX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:633: warning: member YY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:638: warning: member YZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:643: warning: member YT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:649: warning: member ZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:654: warning: member ZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:659: warning: member ZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:664: warning: member ZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:670: warning: member TX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:675: warning: member TY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:680: warning: member TZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:685: warning: member TT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:693: warning: member XXX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:698: warning: member XXY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:703: warning: member XXZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:708: warning: member XXT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:714: warning: member XYX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:719: warning: member XYY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:724: warning: member XYZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:729: warning: member XYT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:735: warning: member XZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:740: warning: member XZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:745: warning: member XZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:750: warning: member XZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:756: warning: member XTX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:761: warning: member XTY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:766: warning: member XTZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:771: warning: member XTT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:777: warning: member YXX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:782: warning: member YXY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:787: warning: member YXZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:792: warning: member YXT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:798: warning: member YYX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:803: warning: member YYY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:808: warning: member YYZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:813: warning: member YYT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:819: warning: member YZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:824: warning: member YZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:829: warning: member YZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:834: warning: member YZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:840: warning: member YTX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:845: warning: member YTY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:850: warning: member YTZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:855: warning: member YTT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:861: warning: member ZXX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:866: warning: member ZXY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:871: warning: member ZXZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:876: warning: member ZXT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:882: warning: member ZYX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:887: warning: member ZYY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:892: warning: member ZYZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:897: warning: member ZYT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:903: warning: member ZZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:908: warning: member ZZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:913: warning: member ZZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:918: warning: member ZZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:924: warning: member ZTX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:929: warning: member ZTY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:934: warning: member ZTZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:939: warning: member ZTT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:945: warning: member TXX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:950: warning: member TXY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:955: warning: member TXZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:960: warning: member TXT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:966: warning: member TYX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:971: warning: member TYY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:976: warning: member TYZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:981: warning: member TYT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:987: warning: member TZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:992: warning: member TZY belongs to two different groups. The second one found here will be ignored.
omist/color/objectPalette.h...
Preprocessing /casa/host/build/include/anatomist/color/palette.h...
Parsing file /casa/host/build/include/anatomist/color/palette.h...
Preprocessing /casa/host/build/include/anatomist/color/paletteList.h...
Parsing file /casa/host/build/include/anatomist/color/paletteList.h...
Preprocessing /casa/host/build/include/anatomist/color/paletteselectwidget.h...
Parsing file /casa/host/build/include/anatomist/color/paletteselectwidget.h...
Preprocessing /casa/host/build/include/anatomist/color/Material.h...
Parsing file /casa/host/build/include/anatomist/color/Material.h...
Preprocessing /casa/host/build/include/anatomist/color/Light.h...
Parsing file /casa/host/build/include/anatomist/color/Light.h...
Preprocessing /casa/host/build/include/anatomist/color/wMaterial.h...
Parsing file /casa/host/build/include/anatomist/color/wMaterial.h...
Preprocessing /casa/host/build/include/anatomist/color/wObjPalette.h...
Parsing file /casa/host/build/include/anatomist/color/wObjPalette.h...
Preprocessing /casa/host/build/include/anatomist/color/wRendering.h...
Parsing file /casa/host/build/include/anatomist/color/wRendering.h...
Preprocessing /casa/host/build/include/anatomist/commands/cActivateAction.h...
Parsing file /casa/host/build/include/anatomist/commands/cActivateAction.h...
Preprocessing /casa/host/build/include/anatomist/commands/cAddObject.h...
Parsing file /casa/host/build/include/anatomist/commands/cAddObject.h...
Preprocessing /casa/host/build/include/anatomist/commands/cApplyBuiltinReferential.h...
Parsing file /casa/host/build/include/anatomist/commands/cApplyBuiltinReferential.h...
Preprocessing /casa/host/build/include/anatomist/commands/cAskTexExtrema.h...
Parsing file /casa/host/build/include/anatomist/commands/cAskTexExtrema.h...
Preprocessing /casa/host/build/include/anatomist/commands/cAssignReferential.h...
Parsing file /casa/host/build/include/anatomist/commands/cAssignReferential.h...
Preprocessing /casa/host/build/include/anatomist/commands/cCamera.h...
Parsing file /casa/host/build/include/anatomist/commands/cCamera.h...
Preprocessing /casa/host/build/include/anatomist/commands/cChangePalette.h...
Parsing file /casa/host/build/include/anatomist/commands/cChangePalette.h...
Preprocessing /casa/host/build/include/anatomist/commands/cControlsParams.h...
Parsing file /casa/host/build/include/anatomist/commands/cControlsParams.h...
Preprocessing /casa/host/build/include/anatomist/commands/cClosePipe.h...
Parsing file /casa/host/build/include/anatomist/commands/cClosePipe.h...
Preprocessing /casa/host/build/include/anatomist/commands/cCloseWindow.h...
Parsing file /casa/host/build/include/anatomist/commands/cCloseWindow.h...
Preprocessing /casa/host/build/include/anatomist/commands/cCreateControlWindow.h...
Parsing file /casa/host/build/include/anatomist/commands/cCreateControlWindow.h...
Preprocessing /casa/host/build/include/anatomist/commands/cCreateWindow.h...
Parsing file /casa/host/build/include/anatomist/commands/cCreateWindow.h...
Preprocessing /casa/host/build/include/anatomist/commands/cCreateWindowsBlock.h...
Parsing file /casa/host/build/include/anatomist/commands/cCreateWindowsBlock.h...
Preprocessing /casa/host/build/include/anatomist/commands/cDeleteAll.h...
Parsing file /casa/host/build/include/anatomist/commands/cDeleteAll.h...
Preprocessing /casa/host/build/include/anatomist/commands/cDeleteElement.h...
Parsing file /casa/host/build/include/anatomist/commands/cDeleteElement.h...
Preprocessing /casa/host/build/include/anatomist/commands/cDeleteObject.h...
Parsing file /casa/host/build/include/anatomist/commands/cDeleteObject.h...
Preprocessing /casa/host/build/include/anatomist/commands/cDuplicateObject.h...
Parsing file /casa/host/build/include/anatomist/commands/cDuplicateObject.h...
Preprocessing /casa/host/build/include/anatomist/commands/cEventFilter.h...
Parsing file /casa/host/build/include/anatomist/commands/cEventFilter.h...
Preprocessing /casa/host/build/include/anatomist/commands/cExit.h...
Parsing file /casa/host/build/include/anatomist/commands/cExit.h...
Pr/casa/host/build/include/aims/math/gradient.h:997: warning: member TZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1002: warning: member TZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1008: warning: member TTX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1013: warning: member TTY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1018: warning: member TTZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1023: warning: member TTT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/random.h:93: warning: member UniformRandom belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/random.h:144: warning: member GaussianRandom belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:66: warning: no matching class member found for
template < F >
aims::ConvolutionSubSampler< F >::ConvolutionSubSampler(const F &f, unsigned r)
Possible candidates:
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(unsigned r=2)'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const Point4du &r)'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const BasisFunction &bfunc, unsigned r)'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const std::vector< BasisFunction > &bfunc=std::vector< BasisFunction >(), const Point4du &r=Point4du(2, 2, 2, 2))'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const ConvolutionSubSampler &other)'
eprocessing /casa/host/build/include/anatomist/commands/cExportTexture.h...
Parsing file /casa/host/build/include/anatomist/commands/cExportTexture.h...
Preprocessing /casa/host/build/include/anatomist/commands/cExternalReference.h...
Parsing file /casa/host/build/include/anatomist/commands/cExternalReference.h...
Preprocessing /casa/host/build/include/anatomist/commands/cExtractTexture.h...
Parsing file /casa/host/build/include/anatomist/commands/cExtractTexture.h...
Preprocessing /casa/host/build/include/anatomist/commands/cFusion2DParams.h...
Parsing file /casa/host/build/include/anatomist/commands/cFusion2DParams.h...
Preprocessing /casa/host/build/include/anatomist/commands/cFusion3DParams.h...
Parsing file /casa/host/build/include/anatomist/commands/cFusion3DParams.h...
Preprocessing /casa/host/build/include/anatomist/commands/cFusionInfo.h...
Parsing file /casa/host/build/include/anatomist/commands/cFusionInfo.h...
Preprocessing /casa/host/build/include/anatomist/commands/cFusionObjects.h...
Parsing file /casa/host/build/include/anatomist/commands/cFusionObjects.h...
Preprocessing /casa/host/build/include/anatomist/commands/cGenerateTexture.h...
Parsing file /casa/host/build/include/anatomist/commands/cGenerateTexture.h...
Preprocessing /casa/host/build/include/anatomist/commands/cGetInfo.h...
Parsing file /casa/host/build/include/anatomist/commands/cGetInfo.h...
Preprocessing /casa/host/build/include/anatomist/commands/cGraphDisplayProperties.h...
Parsing file /casa/host/build/include/anatomist/commands/cGraphDisplayProperties.h...
Preprocessing /casa/host/build/include/anatomist/commands/cGraphParams.h...
Parsing file /casa/host/build/include/anatomist/commands/cGraphParams.h...
Preprocessing /casa/host/build/include/anatomist/commands/cGroupObjects.h...
Parsing file /casa/host/build/include/anatomist/commands/cGroupObjects.h...
Preprocessing /casa/host/build/include/anatomist/commands/cLinkedCursor.h...
Parsing file /casa/host/build/include/anatomist/commands/cLinkedCursor.h...
Preprocessing /casa/host/build/include/anatomist/commands/cLinkWindows.h...
Parsing file /casa/host/build/include/anatomist/commands/cLinkWindows.h...
Preprocessing /casa/host/build/include/anatomist/commands/cLoadGraphSubObjects.h...
Parsing file /casa/host/build/include/anatomist/commands/cLoadGraphSubObjects.h...
Preprocessing /casa/host/build/include/anatomist/commands/cLoadObject.h...
Parsing file /casa/host/build/include/anatomist/commands/cLoadObject.h...
Preprocessing /casa/host/build/include/anatomist/commands/cLoadObjects.h...
Parsing file /casa/host/build/include/anatomist/commands/cLoadObjects.h...
Preprocessing /casa/host/build/include/anatomist/commands/cLoadTransformation.h...
Parsing file /casa/host/build/include/anatomist/commands/cLoadTransformation.h...
Preprocessing /casa/host/build/include/anatomist/commands/cLoadTransformationGraph.h...
Parsing file /casa/host/build/include/anatomist/commands/cLoadTransformationGraph.h...
Preprocessing /casa/host/build/include/anatomist/commands/cNewId.h...
Parsing file /casa/host/build/include/anatomist/commands/cNewId.h...
Preprocessing /casa/host/build/include/anatomist/commands/cNewPalette.h...
Parsing file /casa/host/build/include/anatomist/commands/cNewPalette.h...
Preprocessing /casa/host/build/include/anatomist/commands/cObjectInfo.h...
Parsing file /casa/host/build/include/anatomist/commands/cObjectInfo.h...
Preprocessing /casa/host/build/include/anatomist/commands/cOutput.h...
Parsing file /casa/host/build/include/anatomist/commands/cOutput.h...
Preprocessing /casa/host/build/include/anatomist/commands/cPopupPalette.h...
Parsing file /casa/host/build/include/anatomist/commands/cPopupPalette.h...
Preprocessing /casa/host/build/include/anatomist/commands/cReloadObject.h...
Parsing file /casa/host/build/include/anatomist/commands/cReloadObject.h...
Preprocessing /casa/host/build/include/anatomist/commands/cRemoveObject.h...
Parsing file /casa/host/build/include/anatomist/commands/cRemoveObject.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSaveObject.h...
Par/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:76: warning: no matching class member found for
template < F >
aims::ConvolutionSubSampler< F >::ConvolutionSubSampler(const std::vector< F > &f, const Point4du &r)
Possible candidates:
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(unsigned r=2)'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const Point4du &r)'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const BasisFunction &bfunc, unsigned r)'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const std::vector< BasisFunction > &bfunc=std::vector< BasisFunction >(), const Point4du &r=Point4du(2, 2, 2, 2))'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const ConvolutionSubSampler &other)'
/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:87: warning: no matching class member found for
template < F >
aims::ConvolutionSubSampler< F >::ConvolutionSubSampler(const aims::ConvolutionSubSampler< F > &other)
Possible candidates:
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(unsigned r=2)'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const Point4du &r)'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const BasisFunction &bfunc, unsigned r)'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const std::vector< BasisFunction > &bfunc=std::vector< BasisFunction >(), const Point4du &r=Point4du(2, 2, 2, 2))'
'aims::ConvolutionSubSampler< BasisFunction >::ConvolutionSubSampler(const ConvolutionSubSampler &other)'
/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:284: warning: no uniquely matching class member found for
template < F >
void aims::ConvolutionSubSampler< F >::setBasisFunction(const F &func)
Possible candidates:
'void aims::ConvolutionSubSampler< BasisFunction >::setBasisFunction(const BasisFunction &func)' at line 95 of file /casa/host/build/include/aims/pyramid/convolutionsubsampler.h
'void aims::ConvolutionSubSampler< BasisFunction >::setBasisFunction(const std::vector< BasisFunction > &func)' at line 96 of file /casa/host/build/include/aims/pyramid/convolutionsubsampler.h
/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:290: warning: no uniquely matching class member found for
template < F >
void aims::ConvolutionSubSampler< F >::setBasisFunction(const std::vector< F > &func)
Possible candidates:
'void aims::ConvolutionSubSampler< BasisFunction >::setBasisFunction(const BasisFunction &func)' at line 95 of file /casa/host/build/include/aims/pyramid/convolutionsubsampler.h
'void aims::ConvolutionSubSampler< BasisFunction >::setBasisFunction(const std::vector< BasisFunction > &func)' at line 96 of file /casa/host/build/include/aims/pyramid/convolutionsubsampler.h
/casa/host/build/include/aims/resampling/masklinresampler_d.h:59: warning: no uniquely matching class member found for
template < T >
void aims::MaskLinearResampler::doResample(const carto::Volume< T > &input_data, const soma::Transformation3d &inverse_transform, const T &background, const Point3df &output_location, T &output_value, int t) const
/casa/host/build/include/aims/resampling/masklinresampler_d.h:107: warning: no uniquely matching class member found for
template < T >
void aims::MaskLinearResampler::resample(const carto::Volume< T > &input_data, const aims::AffineTransformation3d &motion, const T &background, carto::Volume< T > &thing, bool verbose) const
sing file /casa/host/build/include/anatomist/commands/cSaveObject.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSaveTransformation.h...
Parsing file /casa/host/build/include/anatomist/commands/cSaveTransformation.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSaveTransformationGraph.h...
Parsing file /casa/host/build/include/anatomist/commands/cSaveTransformationGraph.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSelect.h...
Parsing file /casa/host/build/include/anatomist/commands/cSelect.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSelectByHierarchy.h...
Parsing file /casa/host/build/include/anatomist/commands/cSelectByHierarchy.h...
Preprocessing /casa/host/build/include/anatomist/commands/cServer.h...
Parsing file /casa/host/build/include/anatomist/commands/cServer.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSetControl.h...
Parsing file /casa/host/build/include/anatomist/commands/cSetControl.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSetMaterial.h...
Parsing file /casa/host/build/include/anatomist/commands/cSetMaterial.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSetObjectPalette.h...
Parsing file /casa/host/build/include/anatomist/commands/cSetObjectPalette.h...
Preprocessing /casa/host/build/include/anatomist/commands/cShowObject.h...
Parsing file /casa/host/build/include/anatomist/commands/cShowObject.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSliceParams.h...
Parsing file /casa/host/build/include/anatomist/commands/cSliceParams.h...
Preprocessing /casa/host/build/include/anatomist/commands/cTexturingParams.h...
Parsing file /casa/host/build/include/anatomist/commands/cTexturingParams.h...
Preprocessing /casa/host/build/include/anatomist/commands/cWindowBlock.h...
Parsing file /casa/host/build/include/anatomist/commands/cWindowBlock.h...
Preprocessing /casa/host/build/include/anatomist/commands/cWindowConfig.h...
Parsing file /casa/host/build/include/anatomist/commands/cWindowConfig.h...
Preprocessing /casa/host/build/include/anatomist/config/anatomist_config.h...
Parsing file /casa/host/build/include/anatomist/config/anatomist_config.h...
Preprocessing /casa/host/build/include/anatomist/control/abstractMenuHandler.h...
Parsing file /casa/host/build/include/anatomist/control/abstractMenuHandler.h...
Preprocessing /casa/host/build/include/anatomist/control/backPixmap_P.h...
Parsing file /casa/host/build/include/anatomist/control/backPixmap_P.h...
Preprocessing /casa/host/build/include/anatomist/control/coloredpixmap.h...
Parsing file /casa/host/build/include/anatomist/control/coloredpixmap.h...
Preprocessing /casa/host/build/include/anatomist/control/controlConfig.h...
Parsing file /casa/host/build/include/anatomist/control/controlConfig.h...
Preprocessing /casa/host/build/include/anatomist/control/controlMenuHandler.h...
Parsing file /casa/host/build/include/anatomist/control/controlMenuHandler.h...
Preprocessing /casa/host/build/include/anatomist/control/graphParams.h...
Parsing file /casa/host/build/include/anatomist/control/graphParams.h...
Preprocessing /casa/host/build/include/anatomist/control/objectDrag.h...
Parsing file /casa/host/build/include/anatomist/control/objectDrag.h...
Preprocessing /casa/host/build/include/anatomist/control/qAbout.h...
Parsing file /casa/host/build/include/anatomist/control/qAbout.h...
Preprocessing /casa/host/build/include/anatomist/control/qImageLabel.h...
Parsing file /casa/host/build/include/anatomist/control/qImageLabel.h...
Preprocessing /casa/host/build/include/anatomist/control/qObjTree.h...
Parsing file /casa/host/build/include/anatomist/control/qObjTree.h...
Preprocessing /casa/host/build/include/anatomist/control/qWinTree.h...
Parsing file /casa/host/build/include/anatomist/control/qWinTree.h...
Preprocessing /casa/host/build/include/anatomist/control/toolTips-qt.h...
Parsing file /casa/host/build/include/anatomist/control/toolTips-qt.h...
Preprocessing /casa/host/build/include/anatomist/control/wcontrolevents.h...
Pars/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:49: warning: no matching class member found for
template < F >
aims::ConvolutionFilter< F >::ConvolutionFilter(const F &f)
Possible candidates:
'aims::ConvolutionFilter< BasisFunction >::ConvolutionFilter(const BasisFunction &bfunc)'
'aims::ConvolutionFilter< BasisFunction >::ConvolutionFilter(const std::vector< BasisFunction > &bfunc=std::vector< BasisFunction >())'
'aims::ConvolutionFilter< BasisFunction >::ConvolutionFilter(const ConvolutionFilter &other)'
/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:58: warning: no matching class member found for
template < F >
aims::ConvolutionFilter< F >::ConvolutionFilter(const std::vector< F > &f)
Possible candidates:
'aims::ConvolutionFilter< BasisFunction >::ConvolutionFilter(const BasisFunction &bfunc)'
'aims::ConvolutionFilter< BasisFunction >::ConvolutionFilter(const std::vector< BasisFunction > &bfunc=std::vector< BasisFunction >())'
'aims::ConvolutionFilter< BasisFunction >::ConvolutionFilter(const ConvolutionFilter &other)'
/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:67: warning: no matching class member found for
template < F >
aims::ConvolutionFilter< F >::ConvolutionFilter(const aims::ConvolutionFilter< F > &other)
Possible candidates:
'aims::ConvolutionFilter< BasisFunction >::ConvolutionFilter(const BasisFunction &bfunc)'
'aims::ConvolutionFilter< BasisFunction >::ConvolutionFilter(const std::vector< BasisFunction > &bfunc=std::vector< BasisFunction >())'
'aims::ConvolutionFilter< BasisFunction >::ConvolutionFilter(const ConvolutionFilter &other)'
/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:231: warning: no uniquely matching class member found for
template < F >
void aims::ConvolutionFilter< F >::setBasisFunction(const F &func)
Possible candidates:
'void aims::ConvolutionFilter< BasisFunction >::setBasisFunction(const BasisFunction &func)' at line 97 of file /casa/host/build/include/aims/signalfilter/convolutionfilter.h
'void aims::ConvolutionFilter< BasisFunction >::setBasisFunction(const std::vector< BasisFunction > &func)' at line 99 of file /casa/host/build/include/aims/signalfilter/convolutionfilter.h
/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:237: warning: no uniquely matching class member found for
template < F >
void aims::ConvolutionFilter< F >::setBasisFunction(const std::vector< F > &func)
Possible candidates:
'void aims::ConvolutionFilter< BasisFunction >::setBasisFunction(const BasisFunction &func)' at line 97 of file /casa/host/build/include/aims/signalfilter/convolutionfilter.h
'void aims::ConvolutionFilter< BasisFunction >::setBasisFunction(const std::vector< BasisFunction > &func)' at line 99 of file /casa/host/build/include/aims/signalfilter/convolutionfilter.h
/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:58: warning: no uniquely matching class member found for
template < T >
void aims::ElementFilterFactory::init()
/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:85: warning: no uniquely matching class member found for
template < T >
std::map< std::string, carto::rc_ptr< ElementFilteringImageAlgorithm< T > > > & aims::ElementFilterFactory::_map()
/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:92: warning: documented symbol 'void aims::ElementFilterFactory::registerFilter' was not declared or defined.
/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:102: warning: no uniquely matching class member found for
template < T >
std::set< std::string > aims::ElementFilterFactory::names()
/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:113: warning: no uniquely matching class member found for
template < T >
ElementFilteringImageAlgorithm< T > * aims::ElementFilterFactory::create(const std::string &name, const StructuringElement &strel, carto::Object options)
/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:131: warning: no uniquely matching class member found for
template < T >
ElementFilteringImageAlgorithm< T > * aims::ElementFilterFactory::create(const std::string &name, carto::Object options)
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:142: warning: no uniquely matching class member found for
template < T >
T aims::MaxFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:148: warning: no uniquely matching class member found for
template < T >
T aims::MaxFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:161: warning: no uniquely matching class member found for
template < T >
T aims::MinFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:167: warning: no uniquely matching class member found for
template < T >
T aims::MinFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:180: warning: no uniquely matching class member found for
template < T >
T aims::MedianFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:186: warning: no uniquely matching class member found for
template < T >
T aims::MedianFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:199: warning: no uniquely matching class member found for
template < T >
T aims::NotNullMedianFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:205: warning: no uniquely matching class member found for
template < T >
T aims::NotNullMedianFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:218: warning: no uniquely matching class member found for
template < T >
T aims::MeanFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:224: warning: no uniquely matching class member found for
template < T >
T aims::MeanFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:237: warning: no uniquely matching class member found for
template < T >
T aims::NotNullMeanFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:243: warning: no uniquely matching class member found for
template < T >
T aims::NotNullMeanFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:256: warning: no uniquely matching class member found for
template < T >
T aims::MajorityFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:262: warning: no uniquely matching class member found for
template < T >
T aims::MajorityFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:275: warning: no uniquely matching class member found for
template < T >
T aims::NotNullMajorityFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:281: warning: no uniquely matching class member found for
template < T >
T aims::NotNullMajorityFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:294: warning: no uniquely matching class member found for
template < T >
T aims::ExtremaDifferenceFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:300: warning: no uniquely matching class member found for
template < T >
T aims::ExtremaDifferenceFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:313: warning: no uniquely matching class member found for
template < T >
T aims::SumFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:319: warning: no uniquely matching class member found for
template < T >
T aims::SumFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:332: warning: no uniquely matching class member found for
template < T >
T aims::VarFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:338: warning: no uniquely matching class member found for
template < T >
T aims::VarFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:351: warning: no uniquely matching class member found for
template < T >
T aims::StDevFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:357: warning: no uniquely matching class member found for
template < T >
T aims::StDevFilterFunc::execute(const carto::VolumeRef< T > &volume, const carto::rc_ptr< StructuringElement > &se) const
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:125: warning: documented symbol 'aims::GaborFilterFunc::GaborFilterFunc' was not declared or defined.
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:141: warning: documented symbol 'aims::GaborFilterFunc::~GaborFilterFunc' was not declared or defined.
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:145: warning: no uniquely matching class member found for
template < T >
GaborFilterFunc< T > & aims::GaborFilterFunc::operator=(const GaborFilterFunc< T > &other)
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:164: warning: no uniquely matching class member found for
template < T >
void aims::GaborFilterFunc::setOptions(const carto::Object &options)
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:214: warning: no uniquely matching class member found for
template < T >
void aims::GaborFilterFunc::updateOptions(const carto::Object &options)
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:291: warning: no uniquely matching class member found for
template < T >
const std::vector< int > & aims::GaborFilterFunc::getAmplitude() const
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:297: warning: no matching file member found for
void aims::GaborFilterFunc::setKernel
Possible candidates:
'void setKernel()' at line 150 of file /casa/host/build/include/aims/signalfilter/filteringfunction_linear.h
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:357: warning: no uniquely matching class member found for
template < T >
T aims::GaborFilterFunc::execute(const carto::VolumeRef< T > &volume) const
/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:46: warning: no uniquely matching class member found for
template < T >
void aims::LinearFilterFactory::init()
/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:58: warning: no uniquely matching class member found for
template < T >
std::map< std::string, carto::rc_ptr< LinearFilteringImageAlgorithm< T > > > & aims::LinearFilterFactory::_map()
/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:65: warning: documented symbol 'void aims::LinearFilterFactory::registerFilter' was not declared or defined.
/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:75: warning: no uniquely matching class member found for
template < T >
std::set< std::string > aims::LinearFilterFactory::names()
/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:86: warning: no uniquely matching class member found for
template < T >
LinearFilteringImageAlgorithm< T > * aims::LinearFilterFactory::create(const std::string &name, carto::Object options)
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Parsing file /casa/host/build/include/anatomist/commands/cAddNode.h...
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Parsing file /casa/host/build/include/anatomist/commands/cPaintParams.h...
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Parsing file /casa/host/build/include/anatomis/casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag:1: warning: Internal inconsistency: scope for class carto::conversion::Helper::yes not found!
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/utility/dynamic.h:95: warning: Found unknown command '\function'
/casa/host/build/include/aims/utility/dynamic.h:41: warning: Found unknown command '\function'
file /casa/host/build/include/aims/topology/connectivity26.h...
Preprocessing /casa/host/build/include/aims/topology/connectivity6.h...
Parsing file /casa/host/build/include/aims/topology/connectivity6.h...
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Preprocessing /casa/host/build/include/aims/transform/transform_objects.h...
Parsing file /casa/host/build/include/aims/transform/transform_objects.h...
Preprocessing /casa/host/build/include/aims/transform/transform_objects_d.h...
Parsing file /casa/host/build/include/aims/transform/transform_objects_d.h...
Preprocessing /casa/host/build/include/aims/utility/dynamic.h...
Parsing file /casa/host/build/include/aims/utility/dynamic.h...
Preprocessing /casa/host/build/include/aims/utility/dynamic_d.h...
Parsing file /casa/host/build/include/aims/utility/dynamic_d.h...
Building macro definition list...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Computing nesting relations for classes...
Associating documentation with classes...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
Generating style sheet...
Generating search indices...
Generating images for formulas in HTML...
Generating example documentation...
Generating file sources...
Generating code for file aims/algorithm/imagealgorithm.h...
Generating code for file aims/classification/classifstrategy.h...
Generating code for file aims/classification/classifstrategy_d.h...
Generating code for file aims/classification/distance.h...
Generating code for file aims/classification/distance_d.h...
Generating code for file aims/classification/dynamicstrategy.h...
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Generating code for file aims/classification/individuals.h...
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Generating code for file aims/classification/iterativeclassification.h...
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Generating code for file aims/classification/kmeansstrategy.h...
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Generating code for file aims/classification/mixtureOfPpca.h...
Generating code for file aims/classification/mixtureOfPpca_d.h...
Generating code for file aims/classification/pcastrategy.h...
Generating code for file aims/classification/pcastrategy_d.h...
Generating code for file aims/classification/softDecSimilarityCompAnalysis.h...
Generating code for file aims/compression/compression_g.h...
Generating code for file aims/compression/huffman.h...
Generating code for file aims/compression/lz.h...
Generating code for file aims/compression/lzhl.h...
Generating code for file aims/config/aimsalgo_config.h...
Generating code for file aims/connectivity/meshcc.h...
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Generating code for file aims/distancemap/advection.h...
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Generating code for file aims/distancemap/danielsson.h...
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Generating code for file aims/geodesicpath/geodesic_algorithm_subdivision.h...
Generating code for file aims/geodeswriting output... [100%] pyanatomist_addons
generating indices... genindex <unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_iterator::const_iterator()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_iterator::const_iterator(carto::VolumeRef< T > vol, int y, int z, int t)
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_iterator::const_iterator(iterator other)
<unknown>:1: warning: no uniquely matching class member found for
const std::pair< Point4d, const_LowLevelStorage > & aims::SparseVolume< carto::Volume< T > >::const_iterator::operator*() const
<unknown>:1: warning: no uniquely matching class member found for
const std::pair< Point4d, const_LowLevelStorage > * aims::SparseVolume< carto::Volume< T > >::const_iterator::operator->() const
<unknown>:1: warning: documented symbol 'const const_LowLevelStorage & aims::SparseVolume< carto::Volume< T > >::const_iterator::storage' was not declared or defined.
<unknown>:1: warning: no uniquely matching class member found for
bool aims::SparseVolume< carto::Volume< T > >::const_iterator::operator==(const const_iterator &x) const
<unknown>:1: warning: no uniquely matching class member found for
bool aims::SparseVolume< carto::Volume< T > >::const_iterator::operator!=(const const_iterator &x) const
<unknown>:1: warning: no uniquely matching class member found for
const_iterator & aims::SparseVolume< carto::Volume< T > >::const_iterator::operator++()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::const_LowLevelStorage()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::const_LowLevelStorage(const carto::VolumeRef< T > vol, int y, int z, int t)
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::const_LowLevelStorage(const LowLevelStorage &other)
<unknown>:1: warning: no uniquely matching class member found for
const_iterator aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::begin() const
<unknown>:1: warning: no uniquely matching class member found for
const_iterator aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::end() const
<unknown>:1: warning: no uniquely matching class member found for
carto::VolumeRef< T > aims::SparseVolume< carto::Volume< T > >::const_LowLevelStorage::volume() const
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::iterator::iterator()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::iterator::iterator(carto::VolumeRef< T > vol, int y, int z, int t)
<unknown>:1: warning: no uniquely matching class member found for
std::pair< Point4d, LowLevelStorage > & aims::SparseVolume< carto::Volume< T > >::iterator::operator*()
<unknown>:1: warning: no uniquely matching class member found for
std::pair< Point4d, LowLevelStorage > * aims::SparseVolume< carto::Volume< T > >::iterator::operator->()
<unknown>:1: warning: documented symbol 'LowLevelStorage & aims::SparseVolume< carto::Volume< T > >::iterator::storage' was not declared or defined.
<unknown>:1: warning: no uniquely matching class member found for
bool aims::SparseVolume< carto::Volume< T > >::iterator::operator==(const iterator &x) const
<unknown>:1: warning: no uniquely matching class member found for
bool aims::SparseVolume< carto::Volume< T > >::iterator::operator!=(const iterator &x) const
<unknown>:1: warning: no uniquely matching class member found for
iterator & aims::SparseVolume< carto::Volume< T > >::iterator::operator++()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::LowLevelStorage()
<unknown>:1: warning: no uniquely matching class member found for
aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::LowLevelStorage(carto::VolumeRef< T > vol, int y, int z, int t)
<unknown>:1: warning: no uniquely matching class member found for
iterator aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::begin()
<unknown>:1: warning: no uniquely matching class member found for
const_iterator aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::begin() const
<unknown>:1: warning: no uniquely matching class member found for
iterator aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::end()
<unknown>:1: warning: no uniquely matching class member found for
const_iterator aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::end() const
<unknown>:1: warning: no uniquely matching class member found for
carto::VolumeRef< T > aims::SparseVolume< carto::Volume< T > >::LowLevelStorage::volume() const
/casa/host/build/include/anatomist/graph/AGraphIterator.h:109: warning: no matching class member found for
anatomist::AGraphIterator::AGraphIterator(const AGraphIterator::datatype::iterator &thing)
Possible candidates:
'anatomist::AGraphIterator::AGraphIterator(const datatype::iterator &thing)'
'anatomist::AGraphIterator::AGraphIterator(const AGraphIterator &other)'
py-modindex /casa/host/build/include/anatomist/graph/AGraphIterator.h:181: warning: no matching class member found for
anatomist::const_AGraphIterator::const_AGraphIterator(const const_AGraphIterator::datatype::const_iterator &thing)
Possible candidates:
'anatomist::const_AGraphIterator::const_AGraphIterator(const datatype::const_iterator &thing)'
'anatomist::const_AGraphIterator::const_AGraphIterator(const const_AGraphIterator &other)'
done
copying linked files...
copying notebooks ...
highlighting module code... [ 6%] _thread
highlighting module code... [ 13%] anatomist
highlighting module code... [ 20%] anatomist.base
highlighting module code... [ 26%] anatomist.cpp
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highlighting module code... [100%] anatomist.threadedimpl
writing additional pages... search done
copying images... [100%] anatomist.png
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copying static files... icpath/geodesic_constants_and_simple_functions.h...
Generating code for file aims/geodesicpath/geodesic_memory.h...
Generating code for file aims/geodesicpath/geodesic_mesh.h...
Generating code for file aims/geodesicpath/geodesic_mesh_elements.h...
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Generating code for file aims/histogram/cumulated.h...
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Generating code for file aims/information/information.h...
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Generating code for file aims/mesh/inflate.h...
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Generating code for file aims/mesh/mesher.h...
Generating code for file aims/mesh/meshinterpoler.h...
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Generating code for file aims/mesh/meshinterpoler_p.h...
Generating code for file aims/mesh/meshwatershed.h...
Generating code for file aims/moment/geomMoment.h...
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Generating code for file aims/moment/momFactory.h...
Generating code for file aims/moment/momIncStgy.h...
Generating code for file aims/moment/momInvariant.h...
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Generating code for file aims/moment/momSurfStgy.h...
Generating code for file aims/moment/momTriFactory.h...
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Generating code for file aims/moment/triMoment.h...
Generating code for file aims/morphology/morphogreylevel_d.h...
Generating code for file aims/mdone
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
Sphinx-Gallery successfully executed 0 out of 0 files subselected by:
gallery_conf["filename_pattern"] = '/(anagraphannotate)|(aimsvolumetest)|(anaevensimplerviewer)|(control)|(ellipsoid)|(fusion3D)|(graph)|(graph_building)|(meshtest)|(nomenclatureselection)|(selection)|(volumetest)|(customopenglobject)\\.py'
gallery_conf["ignore_pattern"] = '__init__\\.py'
after excluding 13 files that had previously been run (based on MD5).
embedding documentation hyperlinks...
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embedding documentation hyperlinks for auto_examples... [ 32%] volumetest.html
embedding documentation hyperlinks for auto_examples... [ 36%] meshtest.html
embedding documentation hyperlinks for auto_examples... [ 40%] selection.html
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embedding documentation hyperlinks for auto_examples... [ 48%] activateaction.html
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embedding documentation hyperlinks for auto_examples... [ 60%] events.html
embedding documentation hyperlinks for auto_examples... [ 64%] volumeMeasures.html
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embedding documentation hyperlinks for auto_examples... [ 72%] sg_execution_times.html
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build succeeded, 27 warnings.
The HTML pages are in ../../../share/doc/pyanatomist-5.2/sphinx.
PyAnatomist Module present
PythonLauncher::runModules()
orphology/morphology_g.h...
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Generating code for file aims/primalsketch/coupledDiffusion2DSmoother.h...
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Generating code for file aims/signalfilter/filteringfunction_element_d.h...
Generating code for file aim/casa/host/build/include/anatomist/processor/Registry.h:80: warning: Found unknown command '\Ref'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/surface/glcomponent.h:152: warning: explicit link request to 'texnum' could not be resolved
/casa/host/build/include/anatomist/surface/glcomponent.h:149: warning: explicit link request to 'texnum' could not be resolved
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
s/signalfilter/filteringfunction_element_rgb.h...
Generating code for file aims/signalfilter/filteringfunction_element_rgb_d.h...
Generating code for file aims/signalfilter/filteringfunction_linear.h...
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Generating code for file aims/signalfilter/filteringfunction_linear_rgb.h...
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Generating code for file aims/signalfilter/firfilter.h...
Generating code for file aims/signalfilter/g2dsmooth.h...
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Generating code for file aims/transform/transform_objects.h..warning: Included by graph for 'aimsalgo_config.h' not generated, too many nodes (58), threshold is 50. Consider increasing DOT_GRAPH_MAX_NODES.
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Generating code for file aims/transform/transform_objects_d.h...
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Building macro definition list...
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Flushing cached template relations that have become invalid...
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Searching for member function documentation...
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Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
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Setting anonymous enum type...
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Counting members...
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Finding anchors and sections in the documentation...
Transferring function references...
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Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
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Generating docs for compound Mesher...
Generating docs for compound MEstimator...
Generating docs fo/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/utility/dynamic.h:41: warning: Found unknown command '\function'
/casa/host/build/include/aims/utility/dynamic.h:95: warning: Found unknown command '\function'
/casa/host/build/include/aims/utility/dynamic.h:95: warning: Found unknown command '\function'
/casa/host/build/include/aims/utility/dynamic.h:41: warning: Found unknown command '\function'
/casa/host/build/include/aims/mesh/meshwatershed.h:73: warning: The following parameters of aims::meshBlobsBifurcation(const AimsSurfaceTriangle &mesh, const std::vector< double > &field, std::vector< int > &idx, std::vector< double > &height, std::vector< int > &father, std::vector< int > &label, double th) are not documented:
parameter 'mesh'
parameter 'field'
parameter 'th'
/casa/host/build/include/aims/mesh/meshwatershed.h:48: warning: argument 'lidx' of command @param is not found in the argument list of aims::meshWatershed(const AimsSurfaceTriangle &mesh, const std::vector< double > &field, std::vector< int > &idx, std::vector< int > &depth, std::vector< int > &major, std::vector< int > &label, double threshold)
/casa/host/build/include/aims/mesh/meshwatershed.h:48: warning: argument 'ldepth' of command @param is not found in the argument list of aims::meshWatershed(const AimsSurfaceTriangle &mesh, const std::vector< double > &field, std::vector< int > &idx, std::vector< int > &depth, std::vector< int > &major, std::vector< int > &label, double threshold)
/casa/host/build/include/aims/mesh/meshwatershed.h:48: warning: argument 'lmajor' of command @param is not found in the argument list of aims::meshWatershed(const AimsSurfaceTriangle &mesh, const std::vector< double > &field, std::vector< int > &idx, std::vector< int > &depth, std::vector< int > &major, std::vector< int > &label, double threshold)
/casa/host/build/include/aims/mesh/meshwatershed.h:56: warning: The following parameters of aims::meshWatershed(const AimsSurfaceTriangle &mesh, const std::vector< double > &field, std::vector< int > &idx, std::vector< int > &depth, std::vector< int > &major, std::vector< int > &label, double threshold) are not documented:
parameter 'mesh'
parameter 'field'
parameter 'idx'
parameter 'depth'
parameter 'major'
parameter 'threshold'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:78: warning: argument 'Point4dl' of command @param is not found in the argument list of aims::ImageAlgorithmInterface< T >::getOutputImageDimensions(const Point4dl &dims) const
/casa/host/build/include/aims/algorithm/imagealgorithm.h:84: warning: The following parameter of aims::ImageAlgorithmInterface::getOutputImageDimensions(const Point4dl &dims) const is not documented:
parameter 'dims'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:89: warning: argument 'Point4df' of command @param is not found in the argument list of aims::ImageAlgorithmInterface< T >::getOutputImageVoxelSize(const Point4df &voxelsize) const
/casa/host/build/include/aims/algorithm/imagealgorithm.h:95: warning: The following parameter of aims::ImageAlgorithmInterface::getOutputImageVoxelSize(const Point4df &voxelsize) const is not documented:
parameter 'voxelsize'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:219: warning: argument 'Point4dl' of command @param is not found in the argument list of aims::ImageAlgorithm< T >::getOutputImageDimensions(const Point4dl &dims) const inherited from member getOutputImageDimensions at line 78 in file /casa/host/build/include/aims/algorithm/imagealgorithm.h
/casa/host/build/include/aims/algorithm/imagealgorithm.h:219: warning: The following parameter of aims::ImageAlgorithm::getOutputImageDimensions(const Point4dl &dims) const is not documented:
parameter 'dims'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:223: warning: argument 'Point4df' of command @param is not found in the argument list of aims::ImageAlgorithm< T >::getOutputImageVoxelSize(const Point4df &voxelsize) const inherited from member getOutputImageVoxelSize at line 89 in file /casa/host/build/include/aims/algorithm/imagealgorithm.h
/casa/host/build/include/aims/algorithm/imagealgorithm.h:223: warning: The following parameter of aims::ImageAlgorithm::getOutputImageVoxelSize(const Point4df &voxelsize) const is not documented:
parameter 'voxelsize'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:319: warning: The following parameter of aims::ImageAlgorithmSwitch< T, false >::execute(ImageAlgorithmInterface< T > &algo, const carto::VolumeRef< T > &in, carto::VolumeRef< T > &out, int verbose=carto::verbose) is not documented:
parameter 'verbose'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:350: warning: The following parameter of aims::ImageAlgorithmSwitch< T, true >::execute(ImageAlgorithmInterface< ChannelType > &algo, const carto::VolumeRef< T > &in, carto::VolumeRef< T > &out, int verbose) is not documented:
parameter 'verbose'
h...
Generating code for file anatomist/erpio/erpWraper.h...
Generating code for file anatomist/fusion/defFusionMethods.h...
Generating code for file anatomist/fusion/fusionChooser.h...
Generating code for file anatomist/fusion/fusionFactory.h...
Generating code for file anatomist/gradientwidget/gradient.h...
Generating code for file anatomist/gradientwidget/gradwidget.h...
Generating code for file anatomist/gradientwidget/spline.h...
Generating code for file anatomist/graph/AGraphIterator.h...
Generating code for file anatomist/graph/attribAObject.h...
Generating code for file anatomist/graph/Graph.h...
Generating code for file anatomist/graph/GraphObject.h...
Generating code for file anatomist/graph/pythonAObject.h...
Generating code for file anatomist/graph/qgraphproperties.h...
Generating code for file anatomist/hierarchy/hierarchy.h...
Generating code for file anatomist/interface/qwSurfMatch.h...
Generating code for file anatomist/interpoler/interpoler.h...
Generating code for file anatomist/interpoler/interpolMethod.h...
Generating code for file anatomist/landmark/graphLandmark.h...
Generating code for file anatomist/landmark/landmFactory.h...
Generating code for file anatomist/landmark/landmPicker.h...
Generating code for file anatomist/landmark/plane.h...
Generating code for file anatomist/misc/error.h...
Generating code for file anatomist/mobject/Fusion2D.h...
Generating code for file anatomist/mobject/Fusion3D.h...
Generating code for file anatomist/mobject/glmobject.h...
Generating code for file anatomist/mobject/globjectlist.h...
Generating code for file anatomist/mobject/globjectvector.h...
Generating code for file anatomist/mobject/MObject.h...
Generating code for file anatomist/mobject/ObjectList.h...
Generating code for file anatomist/mobject/objectVector.h...
Generating code for file anatomist/mobject/wFusion2D.h...
Generating code for file anatomist/mobject/wFusion3D.h...
Generating code for file anatomist/module/anasurfmatch.h...
Generating code for file anatomist/module/histogram.h...
Generating code for file anatomist/module/profile.h...
Generating code for file anatomist/module/surfpaintmodule.h...
Generating code for file anatomist/module/surfpainttools.h...
Generating code for file anatomist/module/volrenderfusionmethod.h...
Generating code for file anatomist/module/volrendermodule.h...
Generating code for file anatomist/object/actions.h...
Generating code for file anatomist/object/clippedobject.h...
Generating code for file anatomist/object/loadevent.h...
Generating code for file anatomist/object/mobjectio.h...
Generating code for file anatomist/object/Object.h...
Generating code for file anatomist/object/objectConverter.h...
Generating code for file anatomist/object/objectmenu.h...
Generating code for file anatomist/object/objectmenuCallbacks.h...
Generating code for file anatomist/object/objectparamselect.h...
Generating code for file anatomist/object/objectutils.h...
Generating code for file anatomist/object/objectutils_d.h...
Generating code for file anatomist/object/optionMatcher.h...
Generating code for file anatomist/object/oReader.h...
Generating code for file anatomist/object/qtextureparams.h...
Generating code for file anatomist/object/selfsliceable.h...
Generating code for file anatomist/object/sliceable.h...
Generating code for file anatomist/object/texturepanel.h...
Generating code for file anatomist/object/texturewin.h...
Generating code for file anatomist/object/volrender.h...
Generating code for file anatomist/object/volrenderpanel.h...
Generating code for file anatomist/object/volrendershader.h...
Generating code for file anatomist/observer/Observable.h...
Generating code for file anatomist/observer/observcreat.h...
Generating code for file anatomist/observer/Observer.h...
Generating code for file anatomist/primitive/primitive.h...
Generating code for file anatomist/processor/Command.h...
Generating code for file anatomist/processor/context.h...
Generating code for file anatomist/processor/errormessage.h...
Generating code for file anatomist/processor/event.h...
Generating code fr compound MEstimatorFunc...
Generating docs for compound Minimisation...
Generating docs for compound Moment...
Generating docs for compound MomentBase...
Generating docs for compound MomentFactory...
Generating docs for compound MomentIncrementalStrategy...
Generating docs for compound MomentInvariant...
Generating docs for compound MomentNormalStrategy...
Generating docs for compound MomentStrategy...
Generating docs for compound MomentSurfacicStrategy...
Generating docs for compound MomentTriangleFactory...
Generating docs for compound MomentTriangleStrategy...
Generating docs for compound MomentVolumicStrategy...
Generating docs for compound MpiDataTypeCode...
Generating docs for compound MSFunc...
Generating docs for compound NormalDeviates...
Generating docs for compound ObjectiveFunc...
Generating docs for compound Optimizer...
Generating docs for compound OptimizerProbe...
Generating docs for compound PowellOptimizer...
Generating docs for compound PVItem...
Generating docs for compound PVVectorItem...
Generating docs for compound Pyramid...
Generating docs for compound PyramidFunc...
Generating docs for compound RecursiveGaussian...
Generating docs for compound Sampler...
Generating docs for compound ScaleControl...
Generating docs for compound SimpleHistogram...
Generating docs for compound SingleOptimizer...
Generating docs for compound SobelGradient...
Generating docs for compound SobelGradient< T, 2 >...
Generating docs for compound SoftDecisionSimilarComponent...
Generating docs for compound TabulSpline...
Generating docs for compound TalairachACPCNorm...
Generating docs for compound TalairachBoundingBoxPoints...
Generating docs for compound TalairachBox...
Generating docs for compound TalairachBoxBase...
Generating docs for compound TalairachPoints...
Generating docs for compound TalairachReferential...
Generating docs for compound TalairachVolume...
Generating docs for compound TopologicalClassification...
Generating docs for compound TopologicalClassificationBase...
Generating docs for compound TopologicalClassificationMeaning...
Generating docs for compound TopologicalClassifier...
Generating docs for compound TopologicalClassifier< aims::BucketMap< T > >...
Generating docs for compound TopologicalClassifier< carto::VolumeRef< T > >...
Generating docs for compound TopologicalRelation...
Generating docs for compound Topology...
Generating docs for compound TopologyBase...
Generating docs for compound Transformation...
Generating docs for compound TriangulationMoment...
Generating docs for compound UniformDeviates...
Generating docs for compound WLMSEstimator...
Generating namespace index...
Generating docs for namespace aims
Generating docs for compound aims::ImageAlgorithmInterface...
Generating docs for compound aims::ImageAlgorithm...
Generating docs for compound aims::ImageAlgorithmSwitch...
Generating docs for compound aims::ImageAlgorithmSwitch< T, false >...
Generating docs for compound aims::ImageAlgorithmSwitch< T, true >...
Generating docs for compound aims::Individuals...
Generating docs for compound aims::ClassifStrategy...
Generating docs for compound aims::Distance...
Generating docs for compound aims::DynamicStrategy...
Generating docs for compound aims::IterativeClassification...
Generating docs for compound aims::KmeansStrategy...
Generating docs for compound aims::PpcaAnalyserElement...
Generating docs for compound aims::MixtureOfPPCA...
Generating docs for compound aims::PcaStrategy...
Generating docs for compound aims::GradientAdvection...
Generating docs for compound aims::FastMarching...
Generating docs for compound aims::Point3dfCompare...
Generating docs for compound aims::Point3dCompare...
Generating docs for compound aims::PairCompare...
Generating docs for compound aims::SetCompare...
Generating docs for compound aims::RealToRealFunctionTabulation...
Generating docs for compound aims::FoldGraphAttributes...
Generating docs for compound aims::FoldArgOverSegment...
Generating docs for compound aims::GeodesicPath...
Generating docs for compound aims::RegularBinnedHistogram...
Genor file anatomist/processor/event_doc.h...
Generating code for file anatomist/processor/pipeReader.h...
Generating code for file anatomist/processor/pipeReaderP.h...
Generating code for file anatomist/processor/Processor.h...
Generating code for file anatomist/processor/Reader.h...
Generating code for file anatomist/processor/Registry.h...
Generating code for file anatomist/processor/Serializer.h...
Generating code for file anatomist/processor/server.h...
Generating code for file anatomist/processor/unserializer.h...
Generating code for file anatomist/processor/Writer.h...
Generating code for file anatomist/qtvr3/creator.h...
Generating code for file anatomist/qtvr3/cubeZbuffer.h...
Generating code for file anatomist/qtvr3/mipShader.h...
Generating code for file anatomist/qtvr3/mpvrShader.h...
Generating code for file anatomist/qtvr3/rfmtShader.h...
Generating code for file anatomist/qtvr3/shader.h...
Generating code for file anatomist/qtvr3/shaderFactory.h...
Generating code for file anatomist/qtvr3/slicing.h...
Generating code for file anatomist/qtvr3/sumShader.h...
Generating code for file anatomist/qtvr3/vector3d.h...
Generating code for file anatomist/qtvr3/vrShader.h...
Generating code for file anatomist/qtvr3/vrsingleton.h...
Generating code for file anatomist/reference/Geometry.h...
Generating code for file anatomist/reference/Referential.h...
Generating code for file anatomist/reference/refobserver.h...
Generating code for file anatomist/reference/refpixmap.h...
Generating code for file anatomist/reference/Transformation.h...
Generating code for file anatomist/reference/transformobserver.h...
Generating code for file anatomist/reference/transfSet.h...
Generating code for file anatomist/reference/wChooseReferential.h...
Generating code for file anatomist/reference/wReferential.h...
Generating code for file anatomist/reference/wReferential_3d.h...
Generating code for file anatomist/selection/postSelector.h...
Generating code for file anatomist/selection/qSelectFactory.h...
Generating code for file anatomist/selection/qSelectWid.h...
Generating code for file anatomist/selection/qSelMenu.h...
Generating code for file anatomist/selection/qwSelAttrib.h...
Generating code for file anatomist/selection/selectFactory.h...
Generating code for file anatomist/selection/selector.h...
Generating code for file anatomist/selection/wSelChooser.h...
Generating code for file anatomist/sparsematrix/connectivitymatrix.h...
Generating code for file anatomist/sparsematrix/sparsematrix.h...
Generating code for file anatomist/stdmod/stdmod.h...
Generating code for file anatomist/surface/cutmesh.h...
Generating code for file anatomist/surface/fusion2Dmesh.h...
Generating code for file anatomist/surface/fusiontexsurf.h...
Generating code for file anatomist/surface/glcomponent.h...
Generating code for file anatomist/surface/glcomponent_internals.h...
Generating code for file anatomist/surface/globject.h...
Generating code for file anatomist/surface/mtexture.h...
Generating code for file anatomist/surface/planarfusion3d.h...
Generating code for file anatomist/surface/Shader.h...
Generating code for file anatomist/surface/shownormals.h...
Generating code for file anatomist/surface/shownormalsgui.h...
Generating code for file anatomist/surface/surface.h...
Generating code for file anatomist/surface/surface_d.h...
Generating code for file anatomist/surface/tesselatedmesh.h...
Generating code for file anatomist/surface/texsurface.h...
Generating code for file anatomist/surface/textobject.h...
Generating code for file anatomist/surface/texture.h...
Generating code for file anatomist/surface/transformedobject.h...
Generating code for file anatomist/surface/triangulated.h...
Generating code for file anatomist/surface/vectorfield.h...
Generating code for file anatomist/surface/wvectorfield.h...
Generating code for file anatomist/surfmatcher/surfMatcher.h...
Generating code for file anatomist/surfmatcher/surfMatchMethod.h...
Generating code for file anatomist/volume/slice.h...
Generating code for file anatomist/volume/Volume.h...
Generating code for /casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
[100%] Built target aims-free-sphinx
erating docs for compound aims::InterpolatedVolume...
Generating docs for compound aims::RoiSelectorReader...
Generating docs for compound aims::RoiGtmReader...
Generating docs for compound aims::RoiGtmWriter...
Generating docs for compound aims::DiscriminantAnalysisElement...
Generating docs for compound aims::DiscriminantAnalysis...
Generating docs for compound aims::BaseHarrisDetector...
Generating docs for compound aims::HarrisDetector...
Generating docs for compound aims::HarrisDetector< T, 2 >...
Generating docs for compound aims::ProbabilisticPcaElement...
Generating docs for compound aims::ProbabilisticPca...
Generating docs for compound aims::BSplineOrder...
Generating docs for compound aims::BSplineOrder< 0 >...
Generating docs for compound aims::BSpline...
Generating docs for compound aims::FastBSpline...
Generating docs for compound aims::TabulBSpline...
Generating docs for compound aims::DiscreteBSpline...
Generating docs for compound aims::GeometricProperties...
Generating docs for compound aims::Curvature...
Generating docs for compound aims::CurvatureFactory...
Generating docs for compound aims::FiniteElementCurvature...
Generating docs for compound aims::BoixCurvature...
Generating docs for compound aims::BarycenterCurvature...
Generating docs for compound aims::BoixGaussianCurvature...
Generating docs for compound aims::GaussianCurvature...
Generating docs for compound aims::VertexRemover...
Generating docs for compound aims::MeshInterpoler...
Generating docs for nested compound aims::MeshInterpoler::Private...
Generating docs for compound aims::CoordinatesFieldMeshInterpoler...
Generating docs for compound aims::MorphoGreyLevel...
Generating docs for compound aims::PointsDistribution...
Generating docs for nested compound aims::PointsDistribution::CoulombAndRestoringForce...
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Generating docs for nested compound aims::PointsDistribution::ForceFunction...
Generating docs for nested compound aims::PointsDistribution::MoveConstraints...
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Generating docs for compound aims::ltstr_p3d...
Generating docs for compound aims::ltstr_p3d< Point3d >...
Generating docs for compound aims::ltstr_p3d< std::pair< Point3df, uint > >...
Generating docs for compound aims::MaximumPoint...
Generating docs for compound aims::SaddlePoint...
Generating docs for compound aims::GreyLevelBlob...
Generating docs for compound aims::BlobMeasurements...
Generating docs for compound aims::ExtractGreyLevelBlobs...
Generating docs for compound aims::GreyLevelBlobTools...
Generating docs for compound aims::BaseScaleSpace...
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Generating docs for nested compound aims::ScaleSpace::BlobDescriptor...
Generating docs for compound aims::ScaleSpace< carto::VolumeRef< T >, carto::VolumeRef< T > >...
Generating docs for compound aims::ScaleSpace< AimsSurface< D, Void >, Texture< T > >...
Generating docs for compound aims::ScaleLevel...
Generating docs for compound aims::ScaleLevel< carto::VolumeRef< T >, carto::VolumeRef< T > >...
Generating docs for compound aims::ScaleLevel< AimsSurface< D, Void >, Texture< T > >...
Generating docs for compound aims::Smoother...
Generating docs for compound aims::Smoother< carto::VolumeRef< T >, carto::VolumeRef< T > >...
Generating docs for compound aims::Smoother< AimsSurface< D, Void >, Texture< T > >...
Generating docs for compound aims::PrimalSketch...
Generating docs for compound aims::ScaleSpaceBlob...
Generating docs for compound aims::Bifurcation...
Generating docs for compound aims::ltstr_blob...
Generating docs for compound aims::Primalsketch2graph...
Generating docs for compound aims::CoupledSmoother...
Generating docs for compound aims::CoupledSmoother< carto::VolumeRef< T >, carto::VolumeRef< T > >...
Generating docs for compound aims:file anatomist/volume/volumeview.h...
Generating code for file anatomist/window/colorstyle.h...
Generating code for file anatomist/window/controlledWindow.h...
Generating code for file anatomist/window/glcaps.h...
Generating code for file anatomist/window/glcontext.h...
Generating code for file anatomist/window/glwidget.h...
Generating code for file anatomist/window/glwidgetmanager.h...
Generating code for file anatomist/window/qwinblock.h...
Generating code for file anatomist/window/qwindow.h...
Generating code for file anatomist/window/qWinFactory.h...
Generating code for file anatomist/window/viewstate.h...
Generating code for file anatomist/window/Window.h...
Generating code for file anatomist/window/winFactory.h...
Generating code for file anatomist/window3D/agraphicsview_p.h...
Generating code for file anatomist/window3D/annotedgraph.h...
Generating code for file anatomist/window3D/boxviewslice.h...
Generating code for file anatomist/window3D/connmatrixcontrol.h...
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Generating code for file anatomist/window3D/glwidget3D.h...
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Generating code for file anatomist/window3D/trackObliqueSlice.h...
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Generating code for file anatomist/window3D/zoomDialog.h...
Generating code for file anatomist/winhisto/histo.h...
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Generating code for file anatomist/winprof/profFactory.h...
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Generating code for file anatomist/winprof/profT.h...
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Generating code for file anatomist/winprof/profX.h...
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Generating file documentation...
Generating docs for file anatomist/action/blobsegmentation.h...
Generating docs for file anatomist/action/dynsegmentaction.h...
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Generating docs for file anatomist/action/levelsetaction.h...
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Generating docs for file anatomist/action/nodeselectionaction.h...
Generating docs for file anatomist/action/paintaction.h...
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Generating docs for file anatomist/application/Anatomist.h...
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Generating docs for file anatomist/application/fileDialog.h...
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Generating docs for file anatomist/application/hierarchyeditor.h...
Generating docs for file anatomist/application/listDir.h...
Generating docs for file anatomist/application/localConfig.h...
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Generating docs for file anatomist/application/roialgomodule.h...
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Generating docs for file anatomist/application/settings.h...
Generating docs for file anatomist/application/syntax.h...
Generating docs for file anatomist/browser/attDescr.h...
Generating docs for file anatomist/browser/attributedchooser.h...
Generating docs for file anatomist/browser/browsercontrol.h...
Generating docs for file anatomist/browser/labeledit.h...
Generating docs for file anatomist/browser/qObjBrowserWid.h...
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Generating docs for file anatomist/browser/stringEdit.h...
Generating docs for file anatomist/bucket/Bucket.h...
Generating docs for file anatomist/color/colortraits.h...
Generating docs for file anatomist/color/Light.h...
Generating docs for file anatomist/color/Material.h...
Generating docs for file anatomist/color/minipalette.h...
Generating docs for file anatomist/color/objectPalette.h...
Generating docs for file anatomist/color/palette.h...
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Generating docs for file anatomist/color/paletteselectwidget.h...
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Generating docs for file anatomist/color/wRendering.h...
Generating docs for file anatomist/commands/cActivateAction.h...
Generating docs for file anatomist/commands/cAddNode.h...
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Generating docs for file anatomist/commands/cApplyBuiltinReferential.h...
Generating docs for file anatomist/commands/cAskTexExtrema.h...
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Generating docs for file anatomist/commands/cCamera.h...
Generating docs for file anatomist/commands/cChangePalette.h...
Generating docs for file anatomist/commands/cClosePipe.h...
Generating docs for file anatomist/commands/cCloseWindow.h...
Generating docs for file anatomist/commands/cControlsParams.h...
Generating docs for file anatomist/commands/cCreateControlWindow.h...
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Generating docs for file anatomist/commands/cPaintParams./casa/host/build/include/aims/resampling/resampler.h:228: warning: argument 'transform' of command @param is not found in the argument list of aims::Resampler< T >::resample_inv(const carto::Volume< T > &input_data, const soma::Transformation3d &inverse_transform_to_mm, const T &background, carto::Volume< T > &output_data, bool verbose=false) const
/casa/host/build/include/aims/resampling/resampler.h:247: warning: The following parameter of aims::Resampler::resample_inv(const carto::Volume< T > &input_data, const soma::Transformation3d &inverse_transform_to_mm, const T &background, carto::Volume< T > &output_data, bool verbose=false) const is not documented:
parameter 'inverse_transform_to_mm'
/casa/host/build/include/aims/resampling/resampler.h:205: warning: argument 'inverse_transform' of command @param is not found in the argument list of aims::Resampler< T >::resample_inv(const carto::Volume< T > &input_data, const soma::Transformation3d &inverse_transform_to_mm, const T &background, const Point3df &output_location, T &output_value, int timestep) const
/casa/host/build/include/aims/resampling/resampler.h:221: warning: The following parameter of aims::Resampler::resample_inv(const carto::Volume< T > &input_data, const soma::Transformation3d &inverse_transform_to_mm, const T &background, const Point3df &output_location, T &output_value, int timestep) const is not documented:
parameter 'inverse_transform_to_mm'
h...
Generating docs for file anatomist/commands/cPopupPalette.h...
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Generating docs for file anatomist/constrainteditor/wConstraintEditor.h...
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Generating docs for file anatomistwarning: Included by graph for 'Command.h' not generated, too many nodes (65), threshold is 50. Consider increasing DOT_GRAPH_MAX_NODES.
/fusion/fusionFactory.h...
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Generating docs for file anatomist/processor/Processor/casa/host/build/include/aims/scalespace/meshDiffuse.h:69: warning: The following parameters of aims::TextureSmoothing::surfaceBlockSmooth(const std::string &latt_filename, const std::string *val_filename, const std::string &path_name, unsigned nscans, float dt, unsigned iter, unsigned scans_block, unsigned nodes_block, unsigned nnodes, unsigned ncolPINV, const std::string *outfiles, const float HMAX, const float Umax) are not documented:
parameter 'HMAX'
parameter 'Umax'
.h...
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Genera/casa/host/build/include/aims/signalfilter/filteringfunction_element.h:74: warning: The following parameter of aims::ElementFilteringFunction::execute(const carto::VolumeRef< T > &in, const carto::rc_ptr< StructuringElement > &se) const=0 is not documented:
parameter 'se'
:CoupledDiffusion2DSmoother...
Generating docs for compound aims::ConvolutionSubSampler...
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Generating docs for compound aims::MaskedDiffusionSmoother< T, std::vector< Point3df > >...
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Generatin/casa/host/build/include/anatomist/landmark/landmPicker.h:80: warning: The following parameter of ALandmarkPicker::nearestEuclidian(anatomist::GLComponent *obj, const Point3df &pt, unsigned &index, Point3df &vpos) is not documented:
parameter 'vpos'
/casa/host/build/include/anatomist/landmark/landmPicker.h:65: warning: The following parameter of ALandmarkPicker::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/reference/wChooseReferential.h:71: warning: The following parameter of ChooseReferentialWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/erpio/erpWraper.h:71: warning: The following parameter of ErpWraper::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/window3D/wFixedPointOfView.h:57: warning: The following parameter of FixedPointOfViewWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/mobject/wFusion2D.h:56: warning: The following parameter of Fusion2DWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/mobject/wFusion3D.h:57: warning: The following parameter of Fusion3DWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/landmark/graphLandmark.h:74: warning: The following parameter of GraphLandmarkPicker::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/window3D/wLightModel.h:57: warning: The following parameter of LightModelWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/color/wMaterial.h:64: warning: The following parameter of MaterialWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/action/paintaction.h:78: warning: The following parameter of PaintActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
ting docs for file anatomist/window/glcontext.h...
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Generating docs for compound QAHistogra/casa/host/build/include/anatomist/color/qwObjPalette.h:62: warning: The following parameter of QAPaletteWin::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/aims/distancemap/meshdistance.h:86: warning: The following parameter of aims::meshdistance::pairwiseDistanceMaps(const AimsSurface< 3, Void > &mesh, MapType &distmaps, const Texture< T > &inittex, float max_dist=FLT_MAX) is not documented:
parameter 'mesh'
/casa/host/build/include/aims/distancemap/meshdistance.h:99: warning: The following parameter of aims::meshdistance::pairwiseDistanceMaps(const AimsSurface< 3, Void > &mesh, MapType &distmaps, float max_dist=FLT_MAX) is not documented:
parameter 'mesh'
g docs for compound aims::LinearFilteringFunction...
Generating docs for compound aims::LinearFilteringFunctionFactory...
Generating docs for compound aims::FilteringImageAlgorithmInterface...
Generating docs for compound aims::LinearFilteringImageAlgorithm...
Generating docs for compound aims::ElementFilteringImageAlgorithm...
Generating docs for compound aims::GaborFilter...
Generating docs for compound aims::MedianFilter...
Generating docs for compound aims::NotNullMedianFilter...
Generating docs for compound aims::MeanFilter...
Generating docs for compound aims::NotNullMeanFilter...
Generating docs for compound aims::MinFilter...
Generating docs for compound aims::MaxFilter...
Generating docs for compound aims::MajorityFilter...
Generating docs for compound aims::NotNullMajorityFilter...
Generating docs for compound aims::MovingAverageKernel...
Generating docs for compound aims::MovingAverageCascadeKernel...
Generating docs for compound aims::MovingAverageFilter...
Generating docs for compound aims::MovingAverageCascadeFilter...
Generating docs for compound aims::SumFilter...
Generating docs for compound aims::VarFilter...
Generating docs for compound aims::StDevFilter...
Generating docs for compound aims::IIRFilterBase...
Generating docs for compound aims::CausalSinglePoleIIRFilter...
Generating docs for compound aims::SymAllPoleIIRFilter...
Generating docs for compound aims::InverseBSplineFilter...
Generating docs for compound aims::DirectBSplineFilter...
Generating docs for compound aims::FilterType...
Generating docs for compound aims::SpamBase...
Generating docs for compound aims::SpamFromLikelihood...
Generating docs for compound aims::Spam...
Generating docs for compound aims::TransformLeastSquareEstimation...
Generating docs for compound aims::AffineLeastSquareEstimation...
Generating docs for compound aims::RigidLeastSquareEstimation...
Generating docs for compound aims::TranslationLeastSquareEstimation...
Generating docs for compound aims::SimiLeastSquareEstimation...
Generating docs for compound aims::RigidTransformEstimation...
Generating docs for compound aims::BundleTransformer...
Generating docs for namespace aims::convolutionfilter
Generating docs for namespace aims::convolutionsubsampler
Generating docs for namespace aims::internal
Generating docs for namespace aims::internal::fastmarching
Generating docs for compound aims::internal::fastmarching::StorageTrait...
Generating docs for compound aims::internal::fastmarching::StorageTrait< carto::Volume< T > >...
Generating docs for compound aims::internal::fastmarching::StorageTrait< BucketMap< T > >...
Generating docs for namespace aims::knn
Generating docs for compound aims::knn::Distance...
Generating docs for compound aims::knn::EuclidianDistance...
Generating docs for compound aims::knn::SquaredEuclidianDistance...
Generating docs for compound aims::knn::ManhattanDistance...
Generating docs for compound aims::knn::TchebychevDistance...
Generating docs for compound aims::knn::Database...
Generating docs for nested compound aims::knn::Database::DatabaseCompare...
Generating docs for nested compound aims::knn::Database::iterator...
Generating docs for nested compound aims::knn::Database::Vector...
Generating docs for compound aims::knn::MultiDatabase...
Generating docs for compound aims::knn::Heap...
Generating docs for nested compound aims::knn::Heap::MiniHeap...
Generating docs for compound aims::knn::Knn...
Generating docs for compound aims::knn::KnnBruteForce...
Generating docs for compound aims::knn::KnnFriedman...
Generating docs for compound aims::knn::KnnGlobalFriedman...
Generating docs for namespace aims::meshdistance
Generating docs for compound aims::meshdistance::DistMapMatrixTraits...
Generating docs for compound aims::meshdistance::DistMapMatrixTraits< std::vector< T > >...
Generating docs for compound aims::meshdistance::DistMapMatrixTraits< std::map< T, U > >...
Generating docs for namespace aims::meshgraph
Generating docs for compound aims::meshgraph::MeshFaceNode...
Generating docs for compound aims::meshgraph::MeshVertexNode...
Gene/casa/host/build/include/aims/mesh/mesh_graph.h:122: warning: The following parameters of aims::meshgraph::List2GraphMeshConvertor::operator()(TVertexCollection const &vertices, TFaceCollection const &faceIndices, std::vector< std::list< std::size_t > > const &invertedFaceIndices, TNeighborCollection const &neighbors, std::list< TVertexNode > &graph_vertices, std::list< TFaceNode > &graph_faces) are not documented:
parameter 'graph_vertices'
parameter 'graph_faces'
/casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h:137: warning: argument 'Point4dl' of command @param is not found in the argument list of aims::singlechannel::SubSamplingImageAlgorithm< T >::getOutputImageDimensions(const Point4dl &dims) const inherited from member getOutputImageDimensions at line 78 in file /casa/host/build/include/aims/algorithm/imagealgorithm.h
/casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h:137: warning: The following parameter of aims::singlechannel::SubSamplingImageAlgorithm::getOutputImageDimensions(const Point4dl &dims) const is not documented:
parameter 'dims'
/casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h:144: warning: argument 'Point4df' of command @param is not found in the argument list of aims::singlechannel::SubSamplingImageAlgorithm< T >::getOutputImageVoxelSize(const Point4df &voxelsize) const inherited from member getOutputImageVoxelSize at line 89 in file /casa/host/build/include/aims/algorithm/imagealgorithm.h
/casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h:144: warning: The following parameter of aims::singlechannel::SubSamplingImageAlgorithm::getOutputImageVoxelSize(const Point4df &voxelsize) const is not documented:
parameter 'voxelsize'
/casa/host/build/include/aims/resampling/bucketmapsampler.h:67: warning: argument 'object' of command @param is not found in the argument list of aimsalgo::BucketMapSampler< T, D >::sample(Samplable< T, D > *data, unsigned dimensionIndex, AimsVector< short, D > &partialCoords, aims::BucketMap< Void > &result)
/casa/host/build/include/aims/resampling/bucketmapsampler.h:73: warning: The following parameter of aimsalgo::BucketMapSampler::sample(Samplable< T, D > *data, unsigned dimensionIndex, AimsVector< short, D > &partialCoords, aims::BucketMap< Void > &result) is not documented:
parameter 'data'
/casa/host/build/include/anatomist/window/qwinblock.h:71: warning: The following parameter of QAWindowBlock::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/graph/qgraphproperties.h:59: warning: The following parameter of QGraphProperties::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/selection/qSelectFactory.h:70: warning: The following parameters of QSelectFactory::handleSelectionMenu(anatomist::AWindow *win, int x, int y, const Tree *specific=0) are not documented:
parameter 'win'
parameter 'x'
parameter 'y'
/casa/host/build/include/anatomist/interface/qwSurfMatch.h:60: warning: The following parameter of QSurfMatchWin::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/object/texturepanel.h:75: warning: The following parameter of QTexturePanel::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/object/texturewin.h:62: warning: The following parameter of QTextureWin::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/color/wRendering.h:67: warning: The following parameter of RenderingWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/action/dynsegmentaction.h:227: warning: The following parameter of RoiDynSegmentActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/action/histoplot.h:55: warning: The following parameter of RoiHistoPlot::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/action/levelsetaction.h:187: warning: The following parameter of RoiLevelSetActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/action/roimanagementaction.h:98: warning: The following parameter of RoiManagementActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/action/morphomath.h:113: warning: The following parameter of RoiMorphoMathActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
rating docs for compound aims::meshgraph::List2GraphMeshConvertor...
Generating docs for compound aims::meshgraph::Graph2ListMeshConvertor...
Generating docs for namespace aims::singlechannel
Generating docs for compound aims::singlechannel::SubSamplingImageAlgorithm...
Generating docs for compound aims::singlechannel::LinearFilteringImageAlgorithm...
Generating docs for compound aims::singlechannel::ElementFilteringImageAlgorithm...
Generating docs for namespace aims::strel
Generating docs for namespace aims::util
Generating docs for namespace aimsalgo
Generating docs for compound aimsalgo::BucketMapSampler...
Generating docs for compound aimsalgo::GeneralSampler...
Generating docs for compound aimsalgo::Samplable...
Generating docs for compound aimsalgo::Polynomial...
Generating docs for namespace carto
Generating docs for namespace geodesic
Generating docs for compound geodesic::GeodesicAlgorithmBase...
Generating docs for compound geodesic::SubdivisionNode...
Generating docs for compound geodesic::GeodesicAlgorithmSubdivision...
Generating docs for compound geodesic::DijkstraNode1...
Generating docs for compound geodesic::GeodesicAlgorithmDijkstraAlternative...
Generating docs for compound geodesic::DijkstraNode...
Generating docs for compound geodesic::GeodesicAlgorithmDijkstra...
Generating docs for compound geodesic::SimlpeMemoryAllocator...
Generating docs for compound geodesic::MemoryAllocator...
Generating docs for compound geodesic::OutputBuffer...
Generating docs for compound geodesic::Interval...
Generating docs for compound geodesic::IntervalWithStop...
Generating docs for compound geodesic::IntervalList...
Generating docs for compound geodesic::SurfacePointWithIndex...
Generating docs for compound geodesic::SortedSources...
Generating docs for compound geodesic::SimpleVector...
Generating docs for compound geodesic::MeshElementBase...
Generating docs for compound geodesic::Point3D...
Generating docs for compound geodesic::Vertex...
Generating docs for compound geodesic::Face...
Generating docs for compound geodesic::Edge...
Generating docs for compound geodesic::SurfacePoint...
Generating docs for compound geodesic::HalfEdge...
Generating docs for compound geodesic::GeodesicAlgorithmExact...
Generating docs for compound geodesic::edge_visible_from_source...
Generating docs for compound geodesic::Mesh...
Generating docs for compound geodesic::GeodesicAlgorithmGraphBase...
Generating docs for namespace soma
Generating graph info page...
Generating directory documentation...
Generating dependency graph for directory aims
Generating dependency graph for directory aims/classification
Generating dependency graph for directory aims/compression
Generating dependency graph for directory aims/connectivity
Generating dependency graph for directory aims/distancemap
Generating dependency graph for directory aims/estimation
Generating dependency graph for directory aims/ffd
Generating dependency graph for directory aims/foldgraph
Generating dependency graph for directory aims/geodesicpath
Generating dependency graph for directory aims/information
Generating dependency graph for directory aims/interpolation
Generating dependency graph for directory aims/io
Generating dependency graph for directory aims/math
Generating dependency graph for directory aims/mesh
Generating dependency graph for directory aims/moment
Generating dependency graph for directory aims/morphology
Generating dependency graph for directory aims/optimization
Generating dependency graph for directory aims/primalsketch
Generating dependency graph for directory aims/pyramid
Generating dependency graph for directory aims/registration
Generating dependency graph for directory aims/resampling
Generating dependency graph for directory aims/roi
Generating dependency graph for directory aims/scalespace
Generating dependency graph for directory aims/signalfilter
Generating dependency graph for directory aims/threshold
Generating dependency graph for directory aims/transform
Generating index page...
Generating page index...
Generating module index...
Generating n/casa/host/build/include/anatomist/gradientwidget/spline.h:62: warning: argument 'ptSize' of command @param is not found in the argument list of Spline::findSegment(QSize gradSize, QPoint ptPos, int &p1, int &p2) const
/casa/host/build/include/anatomist/window3D/wTools3D.h:54: warning: The following parameter of Tools3DWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/anatomist/surface/wvectorfield.h:62: warning: The following parameter of VectorFieldEditionWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/object/volrenderpanel.h:68: warning: The following parameter of VolRenderPanel::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/anatomist/color/minipalette.h:67: warning: The following parameter of anatomist::MiniPaletteGraphics::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/color/minipalette.h:248: warning: The following parameter of anatomist::MiniPaletteWidgetEdit::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/color/minipalette.h:283: warning: Unsupported xml/html tag <tab> found
m...
Generating docs for compound QAHistogramWindow...
Generating docs for compound QANumSlider...
Generating docs for compound QAOptionMenuCallback...
Generating docs for compound QAPaletteWin...
Generating docs for compound QAProfileFactory...
Generating docs for compound QAProfileStrategy...
Generating docs for compound QAProfileT...
Generating docs for compound QAProfileWindow...
Generating docs for compound QAProfileX...
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Generating docs for compound QAViewToolTip...
Generating docs for compound QAWindow...
Generating docs for compound QAWindowBlock...
Generating docs for compound QAWindowFactory...
Generating docs for nested compound QAWindowFactory::Descrip...
Generating docs for nested compound QAWindowFactory::PixList...
Generating docs for compound QCancelLineEdit...
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Generating docs for compound QGraphProperties...
Generating docs for compound QImageLabel...
Generating docs for compound QLabelEdit...
Generating docs for compound QObjectBrowser...
Generating docs for compound QObjectBrowserWidget...
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Generating docs for compound QSelectFactory...
Generating docs for compound QSelectMenu...
Generating docs for compound QStringEdit...
Generating docs for compound QSurfMatchWin...
Generating docs for compound QSurfMatchWin_AttEdit...
Generating docs for compound QTexturePanel...
Generating docs for compound QTextureParams...
Generating docs for compound QTextureVectorEditor...
Generating docs for compound QTextureWin...
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Generating docs for compound QWindowTree...
Generating docs for compound ReferentialWindow...
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Generating docs for compound RoiDynSegmentActionView...
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Generating docs for compound Spline...
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Generating docs for compound Tools3DWindow...
Generating docs for compound VectorFieldEditionWindow...
Generating docs for compound VolRenderPanel...
Generating docs for compound ZoomDialog...
Generating namespace index...
Generating docs for namespace aims
Generating docs for namespace anatomist
Generating docs for compound anatomist::AnatomistInfo...
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Generating docs for compound anatomist::GlobalConfiguration...
Generating docs for compound anatomist::LocalConfiguration...
Generating docs for compound anatomist::Settings...
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Generating docs for compound anatomist::SyntaxRepository...
Generating docs for compound anatomist::SelectBrowserControl...
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Generating docs for compound anatomist::ColorScalarPaletteTraits...
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Generating docs for compound anatomist::MiniPaletteGraphics...
Generating docs for compound anatomist::MiniPaletteWidget...
Generating docs for compound anatomist::MiniPaletteWidgetEdit...
Generating docs for compound anatomist::MiniPaletteWidgetTranscient...
Generating docs for compound anatomist::APaletteExtensionAction...
Generating docs for compound anatomist::AObjectPalette...
G/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/commands/cAssignReferential.h:56: warning: argument 'unser' of command @param is not found in the argument list of anatomist::AssignReferentialCommand::AssignReferentialCommand(Referential *ref, const std::set< AObject * > &obj, const std::set< AWindow * > &win, int refId=-1, CommandContext *context=0, const std::string &filename="", const std::string &uuid="")
/casa/host/build/include/anatomist/commands/cAssignReferential.h:66: warning: The following parameters of anatomist::AssignReferentialCommand::AssignReferentialCommand(Referential *ref, const std::set< AObject * > &obj, const std::set< AWindow * > &win, int refId=-1, CommandContext *context=0, const std::string &filename="", const std::string &uuid="") are not documented:
parameter 'context'
parameter 'filename'
parameter 'uuid'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
enerating docs for compound anatomist::APalette...
Generating docs for compound anatomist::PaletteList...
Generating docs for compound anatomist::PaletteSelectWidget...
Generating docs for compound anatomist::Material...
Generating docs for compound anatomist::Light...
Generating docs for compound anatomist::APaletteWin...
Generating docs for compound anatomist::APaletteWinFactory...
Generating docs for compound anatomist::ActivateActionCommand...
Generating docs for compound anatomist::AddObjectCommand...
Generating docs for compound anatomist::ApplyBuiltinReferentialCommand...
Generating docs for compound anatomist::AskTexExtremaCommand...
Generating docs for compound anatomist::AssignReferentialCommand...
Generating docs for compound anatomist::CameraCommand...
Generating docs for compound anatomist::ChangePaletteCommand...
Generating docs for compound anatomist::ControlsParamsCommand...
Generating docs for compound anatomist::ClosePipeCommand...
Generating docs for compound anatomist::CloseWindowCommand...
Generating docs for compound anatomist::CreateControlWindowCommand...
Generating docs for compound anatomist::CreateWindowCommand...
Generating docs for compound anatomist::CreateWindowsBlockCommand...
Generating docs for compound anatomist::DeleteAllCommand...
Generating docs for compound anatomist::DeleteElementCommand...
Generating docs for compound anatomist::DeleteObjectCommand...
Generating docs for compound anatomist::DuplicateObjectCommand...
Generating docs for compound anatomist::EventFilterCommand...
Generating docs for compound anatomist::ExitCommand...
Generating docs for compound anatomist::ExportTextureCommand...
Generating docs for compound anatomist::ExternalReferenceCommand...
Generating docs for compound anatomist::ExtractTextureCommand...
Generating docs for compound anatomist::Fusion2DParamsCommand...
Generating docs for compound anatomist::Fusion3DParamsCommand...
Generating docs for compound anatomist::FusionInfoCommand...
Generating docs for compound anatomist::FusionObjectsCommand...
Generating docs for compound anatomist::GenerateTextureCommand...
Generating docs for compound anatomist::GetInfoCommand...
Generating docs for compound anatomist::GraphDisplayPropertiesCommand...
Generating docs for compound anatomist::GraphParamsCommand...
Generating docs for compound anatomist::GroupObjectsCommand...
Generating docs for compound anatomist::LinkedCursorCommand...
Generating docs for compound anatomist::LinkWindowsCommand...
Generating docs for compound anatomist::LoadGraphSubObjectsCommand...
Generating docs for compound anatomist::LoadObjectCommand...
Generating docs for compound anatomist::LoadObjectsCommand...
Generating docs for compound anatomist::LoadTransformationCommand...
Generating docs for compound anatomist::LoadTransformationGraphCommand...
Generating docs for compound anatomist::NewIdCommand...
Generating docs for compound anatomist::NewPaletteCommand...
Generating docs for compound anatomist::ObjectInfoCommand...
Generating docs for compound anatomist::OutputCommand...
Generating docs for compound anatomist::PopupPaletteCommand...
Generating docs for compound anatomist::ReloadObjectCommand...
Generating docs for compound anatomist::RemoveObjectCommand...
Generating docs for compound anatomist::SaveObjectCommand...
Generating docs for compound anatomist::SaveTransformationCommand...
Generating docs for compound anatomist::SaveTransformationGraphCommand...
Generating docs for compound anatomist::SelectCommand...
Generating docs for compound anatomist::SelectByHierarchyCommand...
Generating docs for compound anatomist::ServerCommand...
Generating docs for compound anatomist::SetControlCommand...
Generating docs for compound anatomist::SetMaterialCommand...
Generating docs for compound anatomist::SetObjectPaletteCommand...
Generating docs for compound anatomist::ShowObjectCommand...
Generating docs for compound anatomist::SliceParamsCommand...
Generating docs for compound anatomist::TexturingParamsCommand...
Generating docs for compound anatomist::WindowBlockCommand...
Generating d/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/control/controlMenuHandler.h:57: warning: The following parameter of anatomist::AControlMenuHandler::AControlMenuHandler(QMenuBar *menubar, QObject *receiver) is not documented:
parameter 'menubar'
ocs for compound anatomist::WindowConfigCommand...
Generating docs for compound anatomist::AbstractMenuHandler...
Generating docs for compound anatomist::ColoredPixmapCache...
Generating docs for compound anatomist::ControlConfiguration...
Generating docs for compound anatomist::AControlMenuHandler...
Generating docs for compound anatomist::GraphParams...
Generating docs for compound anatomist::QAObjectDrag...
Generating docs for compound anatomist::MapObjectEvent...
Generating docs for compound anatomist::UnmapObjectEvent...
Generating docs for compound anatomist::UpdateControlWindowEvent...
Generating docs for compound anatomist::AWinConfigIO...
Generating docs for compound anatomist::WhatsNew...
Generating docs for compound anatomist::Action...
Generating docs for compound anatomist::ActionDictionary...
Generating docs for nested compound anatomist::ActionDictionary::ActionCreatorBase...
Generating docs for nested compound anatomist::ActionDictionary::ActionCreatorFunc...
Generating docs for compound anatomist::ControlDictionary...
Generating docs for nested compound anatomist::ControlDictionary::ControlCreatorBase...
Generating docs for nested compound anatomist::ControlDictionary::ControlCreatorFunc...
Generating docs for compound anatomist::ControlGroupDictionary...
Generating docs for compound anatomist::IconDictionary...
Generating docs for compound anatomist::ActionPool...
Generating docs for compound anatomist::ControlMapEntry...
Generating docs for compound anatomist::LessControlMap...
Generating docs for compound anatomist::ControlManager...
Generating docs for compound anatomist::Control...
Generating docs for nested compound anatomist::Control::DropActionLink...
Generating docs for nested compound anatomist::Control::DropActionLinkOf...
Generating docs for nested compound anatomist::Control::EnterLeaveActionLink...
Generating docs for nested compound anatomist::Control::EnterLeaveActionLinkOf...
Generating docs for nested compound anatomist::Control::FocusActionLink...
Generating docs for nested compound anatomist::Control::FocusActionLinkOf...
Generating docs for nested compound anatomist::Control::KeyActionLink...
Generating docs for nested compound anatomist::Control::KeyActionLinkOf...
Generating docs for nested compound anatomist::Control::KeyMapKey...
Generating docs for nested compound anatomist::Control::LessKeyMap...
Generating docs for nested compound anatomist::Control::LessMouseMap...
Generating docs for nested compound anatomist::Control::MouseActionLink...
Generating docs for nested compound anatomist::Control::MouseActionLinkOf...
Generating docs for nested compound anatomist::Control::MouseButtonMapKey...
Generating docs for nested compound anatomist::Control::MoveOrDragActionLink...
Generating docs for nested compound anatomist::Control::MoveOrDragActionLinkOf...
Generating docs for nested compound anatomist::Control::PaintActionLink...
Generating docs for nested compound anatomist::Control::PaintActionLinkOf...
Generating docs for nested compound anatomist::Control::PanActionLink...
Generating docs for nested compound anatomist::Control::PanActionLinkOf...
Generating docs for nested compound anatomist::Control::PinchActionLink...
Generating docs for nested compound anatomist::Control::PinchActionLinkOf...
Generating docs for nested compound anatomist::Control::ResizeActionLink...
Generating docs for nested compound anatomist::Control::ResizeActionLinkOf...
Generating docs for nested compound anatomist::Control::SelectionChangedActionLink...
Generating docs for nested compound anatomist::Control::SelectionChangedActionLinkOf...
Generating docs for nested compound anatomist::Control::ShowHideActionLink...
Generating docs for nested compound anatomist::Control::ShowHideActionLinkOf...
Generating docs for nested compound anatomist::Control::SwipeActionLink...
Generating docs for nested compound anatomist::Control::SwipeActionLinkOf...
Generating docs for nested compound anatomist::Control::TapActionLink...
Generating docs for nested compound anatomist::Control::TapActionLinkOf...
Generating do/casa/host/build/include/anatomist/hierarchy/hierarchy.h:83: warning: The following parameter of anatomist::Hierarchy::findMatchingNomenclature(const AObject *obj, const AGraph **ag=0) is not documented:
parameter 'obj'
/casa/host/build/include/anatomist/selection/selectFactory.h:134: warning: The following parameters of anatomist::SelectFactory::handleSelectionMenu(AWindow *win, int x, int y, const Tree *specific=0) are not documented:
parameter 'win'
parameter 'x'
parameter 'y'
/casa/host/build/include/anatomist/observer/Observer.h:66: warning: The following parameter of anatomist::Observer::update(const Observable *observable, void *arg)=0 is not documented:
parameter 'arg'
amespace index...
Generating namespace member index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating graphical class hierarchy...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Running plantuml with JAVA...
Running dot...
lookup cache used 14734/65536 hits=131938 misses=17807
finished...
/casa/host/build/include/anatomist/reference/refobserver.h:70: warning: The following parameter of anatomist::ReferentialObserver::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
[100%] Built target aimsalgo-doxygen
/casa/host/build/include/anatomist/surface/glcomponent.h:149: warning: explicit link request to 'texnum' could not be resolved
/casa/host/build/include/anatomist/surface/glcomponent.h:152: warning: explicit link request to 'texnum' could not be resolved
[100%] Built target sigraph-doxygen
/casa/host/build/include/anatomist/surface/glcomponent.h:324: warning: The following parameters of anatomist::GLComponent::glBuildTexImage(const ViewState &state, unsigned tex, int dimx=-1, int dimy=-1, bool useTexScale=true) const are not documented:
parameter 'state'
parameter 'tex'
parameter 'dimy'
[100%] Built target highres-cortex-doxygen
[100%] Built target brainrat-private-doxygen
[100%] Create "share/doc/5.2"
[100%] Built target primatologist-gpl-doxygen
[100%] Built target constellation-doxygen
[100%] Built target cortical_surface-doxygen
[100%] Built target aims-free-devdoc
[100%] Create "share/doc/5.2"
[100%] Create "share/doc/5.2"
[100%] Create "share/doc/5.2"
/casa/host/build/include/anatomist/surface/planarfusion3d.h:103: warning: The following parameters of anatomist::PlanarFusion3D::glBuildTexImage(const ViewState &state, unsigned tex, int dimx=-1, int dimy=-1, bool useTexScale=true) const are not documented:
parameter 'state'
parameter 'tex'
parameter 'dimy'
[100%] Built target bioprocessing-doxygen
[100%] Create "share/doc/5.2"
[100%] Built target highres-cortex-devdoc
[100%] Built target sulci-nonfree-devdoc
[100%] Built target brainrat-private-devdoc
[100%] Create "share/doc/5.2"
[100%] Built target primatologist-gpl-devdoc
[100%] Create "share/doc/5.2"
[100%] Built target aims-free-doc
[100%] Built target highres-cortex-doc
[100%] Built target constellation-nonfree-devdoc
[100%] Built target sulci-nonfree-doc
[100%] Built target cortical_surface-nonfree-devdoc
[100%] Built target brainrat-private-doc
[100%] Create "share/doc/5.2"
[100%] Built target primatologist-gpl-doc
[100%] Built target constellation-nonfree-doc
/casa/host/build/include/anatomist/surface/texture.h:91: warning: The following parameter of anatomist::ATexture::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
[100%] Built target cortical_surface-nonfree-doc
[100%] Built target bioprocessing-devdoc
/casa/host/build/include/anatomist/surface/shownormalsgui.h:72: warning: The following parameter of anatomist::NormalsSettingsPanel::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/surface/shownormalsgui.h:62: warning: The following parameter of anatomist::NormalsSettingsPanel::NormalsObserver::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
[100%] Built target bioprocessing-doc
cs for nested compound anatomist::Control::TapAndHoldActionLink...
Generating docs for nested compound anatomist::Control::TapAndHoldActionLinkOf...
Generating docs for nested compound anatomist::Control::WheelActionLink...
Generating docs for nested compound anatomist::Control::WheelActionLinkOf...
Generating docs for compound anatomist::KeyAndMouseLongEvent...
Generating docs for compound anatomist::MouseLongEvent...
Generating docs for compound anatomist::LongActions...
Generating docs for compound anatomist::ControlSwitchObserver...
Generating docs for compound anatomist::View...
Generating docs for compound anatomist::QAWindowDrag...
Generating docs for compound anatomist::QMagnetSlider...
Generating docs for compound anatomist::Hierarchy...
Generating docs for compound anatomist::QSelectWidget...
Generating docs for compound anatomist::WSelectChooser...
Generating docs for compound anatomist::SelectFactory...
Generating docs for nested compound anatomist::SelectFactory::HColor...
Generating docs for compound anatomist::Selector...
Generating docs for compound anatomist::LowestLevelSelector...
Generating docs for compound anatomist::PostSelector...
Generating docs for compound anatomist::Observer...
Generating docs for compound anatomist::Observable...
Generating docs for compound anatomist::ObservableCreatedNotifier...
Generating docs for compound anatomist::Transformation...
Generating docs for compound anatomist::Referential...
Generating docs for compound anatomist::Geometry...
Generating docs for compound anatomist::Referentiable...
Generating docs for compound anatomist::ReferentialObserver...
Generating docs for compound anatomist::ReferencePixmap...
Generating docs for compound anatomist::TransformationObserver...
Generating docs for compound anatomist::ATransformSet...
Generating docs for compound anatomist::RefWindow...
Generating docs for compound anatomist::CutMesh...
Generating docs for compound anatomist::Fusion2DMesh...
Generating docs for compound anatomist::FusionTexSurfMethod...
Generating docs for compound anatomist::GLComponent...
Generating docs for nested compound anatomist::GLComponent::TexExtrema...
Generating docs for nested compound anatomist::GLComponent::TexInfo...
Generating docs for compound anatomist::AGLObject...
Generating docs for compound anatomist::AMTexture...
Generating docs for compound anatomist::PlanarFusion3D...
Generating docs for compound anatomist::ASurface...
Generating docs for compound anatomist::TesselatedMesh...
Generating docs for compound anatomist::ATexSurfaceIterator...
Generating docs for compound anatomist::const_ATexSurfaceIterator...
Generating docs for compound anatomist::ATexSurface...
Generating docs for compound anatomist::TextObject...
Generating docs for compound anatomist::ATexture...
Generating docs for compound anatomist::TransformedObject...
Generating docs for compound anatomist::Shader...
Generating docs for nested compound anatomist::Shader::ColoringModel_...
Generating docs for nested compound anatomist::Shader::InterpolationModel_...
Generating docs for nested compound anatomist::Shader::LightingModel_...
Generating docs for nested compound anatomist::Shader::MaterialModel_...
Generating docs for compound anatomist::ANormalsMesh...
Generating docs for compound anatomist::NormalsFusionMethod...
Generating docs for compound anatomist::NormalsSettingsPanel...
Generating docs for nested compound anatomist::NormalsSettingsPanel::NormalsObserver...
Generating docs for compound anatomist::VectorField...
Generating docs for compound anatomist::AGraphIterator...
Generating docs for compound anatomist::const_AGraphIterator...
Generating docs for compound anatomist::PythonAObject...
Generating docs for compound anatomist::AGraphObject...
Generating docs for compound anatomist::AGraph...
Generating docs for compound anatomist::ObjectActions...
Generating docs for compound anatomist::ClippedObject...
Generating docs for compound anatomist::AObjectLoadEvent...
Generating docs for compound anatomist::ObjectReaderNotifier...
Generating docs for compound anatom/casa/host/build/include/anatomist/object/oReader.h:86: warning: The following parameter of anatomist::ObjectReader::registerLoader(const std::string &extension, LoadFunctionClass *newFunc) is not documented:
parameter 'extension'
/casa/host/build/include/anatomist/object/Object.h:415: warning: Unsupported xml/html tag <T> found
/casa/host/build/include/anatomist/object/Object.h:449: warning: The following parameter of anatomist::AObject::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/object/sliceable.h:80: warning: The following parameters of anatomist::Sliceable::glBuildTexImage(const ViewState &state, unsigned tex, int dimx=-1, int dimy=-1, bool useTexScale=true) const are not documented:
parameter 'state'
parameter 'tex'
parameter 'dimy'
/casa/host/build/include/anatomist/window/Window.h:224: warning: The following parameter of anatomist::AWindow::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
ist::MObjectIO...
Generating docs for compound anatomist::ObjectMenuCallback...
Generating docs for compound anatomist::ObjectMenuCallbackFunc...
Generating docs for compound anatomist::ObjectMenu...
Generating docs for compound anatomist::ObjectMenuRegistrerClass...
Generating docs for compound anatomist::ObjectMenuRegistrerFuncClass...
Generating docs for compound anatomist::ObjectUtils...
Generating docs for compound anatomist::OptionMatcher...
Generating docs for compound anatomist::ObjectReader...
Generating docs for nested compound anatomist::ObjectReader::LoadFunctionClass...
Generating docs for compound anatomist::AImage...
Generating docs for compound anatomist::AObject...
Generating docs for compound anatomist::ObjectConverter...
Generating docs for compound anatomist::SelfSliceable...
Generating docs for compound anatomist::Sliceable...
Generating docs for compound anatomist::SliceableObject...
Generating docs for compound anatomist::GLCaps...
Generating docs for compound anatomist::GLWidgetManager...
Generating docs for compound anatomist::BlockBorderWidget...
Generating docs for compound anatomist::DraggableWrapper...
Generating docs for compound anatomist::ViewState...
Generating docs for compound anatomist::SliceViewState...
Generating docs for compound anatomist::AWindowCreator...
Generating docs for compound anatomist::AWindowFactory...
Generating docs for compound anatomist::AWindowCreatorFunc...
Generating docs for compound anatomist::AWindow...
Generating docs for compound anatomist::AnnotationAction...
Generating docs for compound anatomist::BoxViewSlice...
Generating docs for compound anatomist::ConnectivityMatrixAction...
Generating docs for compound anatomist::ConnectivityMatrixControl...
Generating docs for compound anatomist::OrientationAnnotation...
Generating docs for compound anatomist::Cursor...
Generating docs for compound anatomist::Control3D...
Generating docs for compound anatomist::Select3DControl...
Generating docs for compound anatomist::FlightControl...
Generating docs for compound anatomist::ObliqueControl...
Generating docs for compound anatomist::TransformControl...
Generating docs for compound anatomist::CutControl...
Generating docs for compound anatomist::WindowActions...
Generating docs for compound anatomist::LinkAction...
Generating docs for compound anatomist::MenuAction...
Generating docs for compound anatomist::SelectAction...
Generating docs for compound anatomist::Zoom3DAction...
Generating docs for compound anatomist::Translate3DAction...
Generating docs for compound anatomist::Sync3DAction...
Generating docs for compound anatomist::MovieAction...
Generating docs for compound anatomist::SliceAction...
Generating docs for compound anatomist::DragObjectAction...
Generating docs for compound anatomist::SortMeshesPolygonsAction...
Generating docs for compound anatomist::ObjectStatAction...
Generating docs for compound anatomist::LabelEditAction...
Generating docs for compound anatomist::Trackball...
Generating docs for compound anatomist::ContinuousTrackball...
Generating docs for compound anatomist::KeyFlightAction...
Generating docs for compound anatomist::TrackCutAction...
Generating docs for compound anatomist::CutSliceAction...
Generating docs for compound anatomist::TrackOblique...
Generating docs for compound anatomist::TrackObliqueSlice...
Generating docs for compound anatomist::Transformer...
Generating docs for compound anatomist::TranslaterAction...
Generating docs for compound anatomist::PlanarTransformer...
Generating docs for compound anatomist::ResizerAction...
Generating docs for compound anatomist::GLObjectList...
Generating docs for compound anatomist::GLObjectVector...
Generating docs for compound anatomist::GLMObject...
Generating docs for compound anatomist::ObjectVectorIterator...
Generating docs for compound anatomist::const_ObjectVectorIterator...
Generating docs for compound anatomist::ObjectVector...
Generating docs for compound anatomist::BaseIterator...
Generating docs for compound anatomist::AIterator...
Generating docs for compound anatomist::[100%] Built target anatomist-gpl-sphinx
/casa/host/build/include/anatomist/object/Object.h:415: warning: Unsupported xml/html tag <T> found
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
warning: Inheritance graph for 'anatomist::RegularCommand' not generated, too many nodes (57), threshold is 50. Consider increasing DOT_GRAPH_MAX_NODES.
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Registry.h:80: warning: Found unknown command '\Ref'
/casa/host/build/include/anatomist/processor/Registry.h:60: warning: Found unknown command '\URL'
/casa/host/build/include/anatomist/processor/Registry.h:80: warning: Found unknown command '\Ref'
/casa/host/build/include/anatomist/processor/Registry.h:85: warning: The following parameters of anatomist::Registry::add(const std::string &command, Command::Reader function, const carto::SyntaxSet &syntax) are not documented:
parameter 'function'
parameter 'syntax'
/casa/host/build/include/anatomist/processor/Reader.h:64: warning: The following parameter of anatomist::CommandReader::CommandReader(const std::string &filename, carto::MutexRcPtr< CommandContext > &context) is not documented:
parameter 'context'
/casa/host/build/include/anatomist/constrainteditor/wConstraintEditor.h:61: warning: The following parameter of anatomist::ConstraintEditorWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
MObject...
Generating docs for compound anatomist::Fusion2D...
Generating docs for compound anatomist::Fusion3D...
Generating docs for compound anatomist::ObjectListIterator...
Generating docs for compound anatomist::const_ObjectListIterator...
Generating docs for compound anatomist::ObjectList...
Generating docs for compound anatomist::Slice...
Generating docs for compound anatomist::AVolumeBase...
Generating docs for compound anatomist::AVolume...
Generating docs for compound anatomist::AVolumeView...
Generating docs for compound anatomist::CommandContext...
Generating docs for compound anatomist::ErrorMessage...
Generating docs for compound anatomist::OutputEvent...
Generating docs for compound anatomist::OutputEventFilter...
Generating docs for compound anatomist::EventHandler...
Generating docs for compound anatomist::APipeReader...
Generating docs for compound anatomist::Unserializer...
Generating docs for compound anatomist::CommandServer...
Generating docs for compound anatomist::Command...
Generating docs for compound anatomist::RegularCommand...
Generating docs for compound anatomist::SerializingCommand...
Generating docs for compound anatomist::WaitCommand...
Generating docs for compound anatomist::Processor...
Generating docs for nested compound anatomist::Processor::Memo...
Generating docs for compound anatomist::Registry...
Generating docs for compound anatomist::CommandReader...
Generating docs for compound anatomist::CommandWriter...
Generating docs for compound anatomist::Serializer...
Generating docs for compound anatomist::Fusion2dMethod...
Generating docs for compound anatomist::Fusion3dMethod...
Generating docs for compound anatomist::PlanarFusion3dMethod...
Generating docs for compound anatomist::FusionTextureMethod...
Generating docs for compound anatomist::FusionMultiTextureMethod...
Generating docs for compound anatomist::FusionCutMeshMethod...
Generating docs for compound anatomist::Fusion2DMeshMethod...
Generating docs for compound anatomist::FusionSliceMethod...
Generating docs for compound anatomist::FusionRGBAVolumeMethod...
Generating docs for compound anatomist::FusionClipMethod...
Generating docs for compound anatomist::FusionTesselationMethod...
Generating docs for compound anatomist::ConnectivityMatrixFusionMethod...
Generating docs for compound anatomist::VectorFieldFusionMethod...
Generating docs for compound anatomist::FusionMethod...
Generating docs for compound anatomist::FusionFactory...
Generating docs for compound anatomist::StdModule...
Generating docs for compound anatomist::AConnectivityMatrix...
Generating docs for compound anatomist::ASparseMatrix...
Generating docs for compound anatomist::GLItem...
Generating docs for compound anatomist::Primitive...
Generating docs for compound anatomist::GLList...
Generating docs for compound anatomist::GLTexture...
Generating docs for compound anatomist::GLItemList...
Generating docs for compound anatomist::GLNoExecItemList...
Generating docs for compound anatomist::ConstraintEditorWindow...
Generating docs for compound anatomist::NodeSelectionAction...
Generating docs for compound anatomist::NodeSelectionControl...
Generating docs for compound anatomist::HierarchyEditor...
Generating docs for compound anatomist::ErpReader...
Generating docs for compound anatomist::AInterpolerMethod...
Generating docs for compound anatomist::AInterpoler...
Generating docs for compound anatomist::ALandmarkFactory...
Generating docs for compound anatomist::PlaneFusionMethod...
Generating docs for compound anatomist::CylinderFusionMethod...
Generating docs for compound anatomist::ASurfMatchMethod...
Generating docs for compound anatomist::ASurfMatcher...
Generating docs for compound anatomist::AnaSurfMatch...
Generating docs for compound anatomist::SurfpaintModule...
Generating docs for compound anatomist::SurfpaintTools...
Generating docs for compound anatomist::SurfpaintToolsAction...
Generating docs for compound anatomist::SurfpaintToolsControl...
Generating docs for compound anatomist::VolRenderFusionMethod...
Generating docs for compound anatomist::Vo/casa/host/build/include/anatomist/action/levelsetaction.h:64: warning: The following parameter of anatomist::RoiLevelSetActionSharedData::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/action/paintaction.h:124: warning: The following parameters of anatomist::PaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef< AObject * > &volumeOfLabels, const Point3df &vlOffset, aims::BucketMap< Void >::Bucket &deltaModifications, std::list< std::pair< Point3d, ChangesItem > > &changes, const Point3df &voxelSize, bool line, bool replace, bool mm)=0 are not documented:
parameter 'win'
parameter 'transf'
parameter 'point'
parameter 'originalLabel'
parameter 'finalLabel'
parameter 'brushSize'
parameter 'lineMode'
parameter 'volumeOfLabels'
parameter 'deltaModifications'
parameter 'changes'
parameter 'voxelSize'
parameter 'line'
parameter 'replace'
parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:177: warning: The following parameters of anatomist::PointPaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef< AObject * > &volumeOfLabels, const Point3df &vlOffset, aims::BucketMap< Void >::Bucket &deltaModifications, std::list< std::pair< Point3d, ChangesItem > > &changes, const Point3df &voxelSize, bool line, bool replace, bool mm) are not documented:
parameter 'win'
parameter 'transf'
parameter 'point'
parameter 'originalLabel'
parameter 'finalLabel'
parameter 'brushSize'
parameter 'lineMode'
parameter 'volumeOfLabels'
parameter 'deltaModifications'
parameter 'changes'
parameter 'voxelSize'
parameter 'line'
parameter 'replace'
parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:200: warning: The following parameters of anatomist::SquarePaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef< AObject * > &volumeOfLabels, const Point3df &vlOffset, aims::BucketMap< Void >::Bucket &deltaModifications, std::list< std::pair< Point3d, ChangesItem > > &changes, const Point3df &voxelSize, bool line, bool replace, bool mm) are not documented:
parameter 'win'
parameter 'transf'
parameter 'point'
parameter 'originalLabel'
parameter 'finalLabel'
parameter 'brushSize'
parameter 'lineMode'
parameter 'volumeOfLabels'
parameter 'deltaModifications'
parameter 'changes'
parameter 'voxelSize'
parameter 'line'
parameter 'replace'
parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:224: warning: The following parameters of anatomist::DiskPaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef< AObject * > &volumeOfLabels, const Point3df &vlOffset, aims::BucketMap< Void >::Bucket &deltaModifications, std::list< std::pair< Point3d, ChangesItem > > &changes, const Point3df &voxelSize, bool line, bool replace, bool mm) are not documented:
parameter 'win'
parameter 'transf'
parameter 'point'
parameter 'originalLabel'
parameter 'finalLabel'
parameter 'brushSize'
parameter 'lineMode'
parameter 'volumeOfLabels'
parameter 'deltaModifications'
parameter 'changes'
parameter 'voxelSize'
parameter 'line'
parameter 'replace'
parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:259: warning: The following parameters of anatomist::BallPaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef< AObject * > &volumeOfLabels, const Point3df &vlOffset, aims::BucketMap< Void >::Bucket &deltaModifications, std::list< std::pair< Point3d, ChangesItem > > &changes, const Point3df &voxelSize, bool line, bool replace, bool mm) are not documented:
parameter 'win'
parameter 'transf'
parameter 'point'
parameter 'originalLabel'
parameter 'finalLabel'
parameter 'brushSize'
parameter 'lineMode'
parameter 'volumeOfLabels'
parameter 'deltaModifications'
parameter 'changes'
parameter 'voxelSize'
parameter 'line'
parameter 'replace'
parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:296: warning: The following parameter of anatomist::PaintActionSharedData::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/action/roimanagementaction.h:203: warning: The following parameter of anatomist::RoiManagementActionSharedData::update(const Observable *observable, void *arg) is not documented:
parameter 'arg'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/commands/cGetConnThres.h:58: warning: argument 'ref' of command @param is not found in the argument list of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &requestid, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cGetConnThres.h:58: warning: argument 'obj' of command @param is not found in the argument list of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &requestid, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cGetConnThres.h:58: warning: argument 'refId' of command @param is not found in the argument list of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &requestid, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cGetConnThres.h:58: warning: argument 'unser' of command @param is not found in the argument list of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &requestid, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cGetConnThres.h:68: warning: The following parameters of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &requestid, CommandContext *context=0) are not documented:
parameter 'image'
parameter 'requestid'
parameter 'context'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/commands/cSetConnThres.h:56: warning: argument 'ref' of command @param is not found in the argument list of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cSetConnThres.h:56: warning: argument 'obj' of command @param is not found in the argument list of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cSetConnThres.h:56: warning: argument 'refId' of command @param is not found in the argument list of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cSetConnThres.h:56: warning: argument 'unser' of command @param is not found in the argument list of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cSetConnThres.h:66: warning: The following parameters of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0) are not documented:
parameter 'image'
parameter 'assignLowThreshold'
parameter 'lowThres'
parameter 'assignHighThreshold'
parameter 'highThres'
parameter 'context'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/action/dynsegmentaction.h:65: warning: The following parameter of anatomist::RoiDynSegmentAction::update(const anatomist::Observable *observable, void *arg) is not documented:
parameter 'arg'
lRenderShaderFusionMethod...
Generating docs for compound anatomist::VolRenderModule...
Generating docs for compound anatomist::VolRender...
Generating docs for compound anatomist::VolRenderShader...
Generating docs for compound anatomist::ProfileModule...
Generating docs for compound anatomist::RoiLevelSetActionSharedData...
Generating docs for compound anatomist::RoiLevelSetAction...
Generating docs for compound anatomist::RoiLabelNamingAction...
Generating docs for compound anatomist::ChangesItem...
Generating docs for compound anatomist::ChangedBucketsItem...
Generating docs for compound anatomist::RoiChangeProcessor...
Generating docs for compound anatomist::PaintStrategy...
Generating docs for compound anatomist::PointPaintStrategy...
Generating docs for compound anatomist::SquarePaintStrategy...
Generating docs for compound anatomist::DiskPaintStrategy...
Generating docs for compound anatomist::BallPaintStrategy...
Generating docs for compound anatomist::PaintActionSharedData...
Generating docs for compound anatomist::PaintAction...
Generating docs for compound anatomist::RoiBlobSegmentationAction...
Generating docs for compound anatomist::PaintControl...
Generating docs for compound anatomist::RoiLevelSetControl...
Generating docs for compound anatomist::RoiLabelNamingControl...
Generating docs for compound anatomist::RoiManagementActionSharedData...
Generating docs for compound anatomist::RoiManagementAction...
Generating docs for compound anatomist::RoiBaseModule...
Generating docs for compound anatomist::CreateGraphCommand...
Generating docs for compound anatomist::GetConnThresholdCommand...
Generating docs for compound anatomist::SetConnThresholdCommand...
Generating docs for compound anatomist::AddNodeCommand...
Generating docs for compound anatomist::PaintParamsCommand...
Generating docs for compound anatomist::RoiDynSegmentAction...
Generating docs for compound anatomist::RoiMorphoMathAction...
Generating docs for compound anatomist::RoiDynSegmentControl...
Generating docs for compound anatomist::RoiAlgoModule...
Generating docs for compound anatomist::HistogramModule...
Generating docs for namespace anatomist::internal
Generating docs for compound anatomist::internal::ColorTraitsType...
Generating docs for compound anatomist::internal::PaletteWinExtensionActions...
Generating docs for compound anatomist::internal::VectorFieldCoordSpinBox...
Generating docs for compound anatomist::internal::AGraphicsView...
Generating docs for compound anatomist::internal::AGraphicsScene...
Generating docs for compound anatomist::internal::TransformerActionData...
Generating docs for compound anatomist::internal::NoDragSlider...
Generating docs for compound anatomist::internal::CommandReader_Bridge...
Generating docs for namespace carto
Generating docs for compound carto::GLWidget...
Generating docs for namespace Vr
Generating docs for compound Vr::Creator...
Generating docs for compound Vr::CubeZBuffer...
Generating docs for compound Vr::MIPShader...
Generating docs for compound Vr::MPVRShader...
Generating docs for compound Vr::RfmtShader...
Generating docs for compound Vr::Shader...
Generating docs for compound Vr::ShaderFactory...
Generating docs for compound Vr::Slicing...
Generating docs for compound Vr::SumShader...
Generating docs for compound Vr::Vector3d...
Generating docs for compound Vr::VRShader...
Generating docs for compound Vr::VrSingleton...
Generating graph info page...
Generating directory documentation...
Generating dependency graph for directory anatomist/action
Generating dependency graph for directory anatomist
Generating dependency graph for directory anatomist/application
Generating dependency graph for directory anatomist/browser
Generating dependency graph for directory anatomist/bucket
Generating dependency graph for directory anatomist/color
Generating dependency graph for directory anatomist/commands
Generating dependency graph for directory anatomist/constrainteditor
Generating dependency graph for directory anatomist/control
Generating dependency graph for directory anatomist/controler
Gener/casa/host/build/include/anatomist/application/anatomist_doc.h:41: warning: image file anatomist.png is not found in IMAGE_PATH: assuming external image.
/casa/host/build/include/anatomist/application/anatomist_doc.h:41: warning: image file anatomist.png is not found in IMAGE_PATH: assuming external image.
ating dependency graph for directory anatomist/erpio
Generating dependency graph for directory anatomist/graph
Generating dependency graph for directory anatomist/hierarchy
Generating dependency graph for directory anatomist/interface
Generating dependency graph for directory anatomist/interpoler
Generating dependency graph for directory anatomist/landmark
Generating dependency graph for directory anatomist/mobject
Generating dependency graph for directory anatomist/module
Generating dependency graph for directory anatomist/object
Generating dependency graph for directory anatomist/processor
Generating dependency graph for directory anatomist/reference
Generating dependency graph for directory anatomist/selection
Generating dependency graph for directory anatomist/sparsematrix
Generating dependency graph for directory anatomist/stdmod
Generating dependency graph for directory anatomist/surface
Generating dependency graph for directory anatomist/surfmatcher
Generating dependency graph for directory anatomist/volume
Generating dependency graph for directory anatomist/window
Generating dependency graph for directory anatomist/window3D
Generating dependency graph for directory anatomist/winhisto
Generating dependency graph for directory anatomist/winprof
Generating index page...
Generating page index...
Generating module index...
Generating namespace index...
Generating namespace member index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating graphical class hierarchy...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Running plantuml with JAVA...
Running dot...
lookup cache used 18411/65536 hits=112114 misses=22457
finished...
[100%] Built target anatomist-doxygen
[100%] Create "share/doc/5.2"
[100%] Built target pyanatomist-doxygen
[100%] Built target anatomist-free-devdoc
[100%] Create "share/doc/5.2"
[100%] Built target anatomist-free-doc
[100%] Built target anatomist-gpl-devdoc
[100%] Built target anatomist-gpl-doc
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:53,266::INFO::Found '0' pipeline(s) in 'deepsulci.sulci_labeling.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:53,266::INFO::Found '3' process(es) in 'deepsulci.sulci_labeling.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:53,266::INFO::Processing pipeline 'deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:53,267::INFO::Processing pipeline 'deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:53,268::INFO::Processing pipeline 'deepsulci.sulci_labeling.capsul.training.SulciDeepTraining'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:53,268::INFO::Writing index at location '/casa/host/src/morphologist/morpho-deepsulci/master/sphinx/process_docs/deepsulci/sulci_labeling/process/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:53,269::INFO::process: '3' files written for module 'sulci_labeling' at location /casa/host/src/morphologist/morpho-deepsulci/master/sphinx/process_docs/deepsulci/sulci_labeling/process.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:53,269::INFO::Writing module 'sulci_labeling' index at location '/casa/host/src/morphologist/morpho-deepsulci/master/sphinx/process_docs/deepsulci/sulci_labeling/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:53,269::INFO::Index: an index has been written for module 'sulci_labeling' at location /casa/host/src/morphologist/morpho-deepsulci/master/sphinx/process_docs/deepsulci/sulci_labeling.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:53,314::INFO::Pipeline 'morphologist.capsul.morphologist.Morphologist' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.morphologist.Morphologist.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:53,396::INFO::Pipeline 'morphologist.capsul.axon.sulcilabelling.SulciLabelling' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabelling.SulciLabelling.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:53,804::INFO::Pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:53,895::INFO::Pipeline 'morphologist.capsul.fslnormalization.FSLNormalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLNormalization.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:54,036::INFO::Pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.brainorientation.BrainOrientation.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:54,157::INFO::Pipeline 'morphologist.capsul.morphologist.Morphologist' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.morphologist.Morphologist.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:54,207::INFO::Pipeline 'morphologist.capsul.spmnormalization.SPMnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:54,311::INFO::Pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.brainorientation.BrainOrientation.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:54,323::INFO::Pipeline 'morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:54,323::INFO::Summary: '14' files written for module 'capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:54,389::INFO::Pipeline 'morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:54,497::INFO::Pipeline 'morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:54,580::INFO::Pipeline 'morphologist.capsul.fslnormalization.FSLnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:54,825::INFO::Found '14' pipeline(s) in 'morphologist.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:54,826::INFO::Found '40' process(es) in 'morphologist.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:54,826::INFO::Processing pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:55,009::INFO::Pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:55,093::INFO::Pipeline 'morphologist.capsul.spmnormalization.SPMNormalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMNormalization.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:55,155::INFO::Pipeline 'morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:55,248::INFO::Pipeline 'morphologist.capsul.axon.sulcilabelling.SulciLabelling' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabelling.SulciLabelling.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:55,315::INFO::Pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:55,396::INFO::Pipeline 'morphologist.capsul.fslnormalization.FSLNormalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLNormalization.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:55,396::INFO::Summary: '14' files written for module 'capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:55,991::INFO::Found '14' pipeline(s) in 'morphologist.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:55,991::INFO::Found '40' process(es) in 'morphologist.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:55,991::INFO::Processing pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:57,290::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:57,296::INFO::Processing pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:57,346::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:57,353::INFO::Processing pipeline 'morphologist.capsul.axon.normalization.Normalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:57,389::INFO::Processing pipeline 'morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:57,437::INFO::Processing pipeline 'morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:57,447::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabelling.SulciLabelling'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:57,469::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:57,479::INFO::Processing pipeline 'morphologist.capsul.fslnormalization.FSLNormalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:57,487::INFO::Processing pipeline 'morphologist.capsul.fslnormalization.FSLnormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:57,494::INFO::Processing pipeline 'morphologist.capsul.morphologist.Morphologist'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-06-30 06:12:57,577::INFO::Found '0' pipeline(s) in 'deepsulci.pattern_classification.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,149::INFO::Processing pipeline 'morphologist.capsul.spmnormalization.SPMNormalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,161::INFO::Processing pipeline 'morphologist.capsul.spmnormalization.SPMnormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,171::INFO::Writing index at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,172::INFO::pipeline: '14' files written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/pipeline.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,172::INFO::Processing pipeline 'morphologist.capsul.axon.acpcorientation.AcpcOrientation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,173::INFO::Processing pipeline 'morphologist.capsul.axon.aimsconverter.AimsConverter'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,173::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationtoaims.BaladinNormalizationToAims'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,174::INFO::Processing pipeline 'morphologist.capsul.axon.brainsegmentation.BrainSegmentation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,175::INFO::Processing pipeline 'morphologist.capsul.axon.brainvolumes.brainvolumes'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,176::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationtoaims.FSLnormalizationToAims'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,176::INFO::Processing pipeline 'morphologist.capsul.axon.greywhiteclassificationhemi.GreyWhiteClassificationHemi'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,177::INFO::Processing pipeline 'morphologist.capsul.axon.greywhitemesh.GreyWhiteMesh'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,177::INFO::Processing pipeline 'morphologist.capsul.axon.greywhitetopology.GreyWhiteTopology'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,178::INFO::Processing pipeline 'morphologist.capsul.axon.histoanalysis.HistoAnalysis'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,178::INFO::Processing pipeline 'morphologist.capsul.axon.importt1mri.ImportT1MRI'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,179::INFO::Processing pipeline 'morphologist.capsul.axon.morpho_report.morpho_report'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,180::INFO::Processing pipeline 'morphologist.capsul.axon.morphologistprocess.morphologistProcess'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,184::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_aimsmiregister.normalization_aimsmiregister'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,184::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_baladin.Normalization_Baladin'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,185::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_fsl_reinit.Normalization_FSL_reinit'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,185::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_spm_reinit.Normalization_SPM_reinit'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,186::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_t1_spm12_reinit.normalization_t1_spm12_reinit'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,187::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_t1_spm8_reinit.normalization_t1_spm8_reinit'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,187::INFO::Processing pipeline 'morphologist.capsul.axon.pialmesh.PialMesh'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,188::INFO::Processing pipeline 'morphologist.capsul.axon.reorientanatomy.ReorientAnatomy'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,188::INFO::Processing pipeline 'morphologist.capsul.axon.scalpmesh.ScalpMesh'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,189::INFO::Processing pipeline 'morphologist.capsul.axon.skullstripping.skullstripping'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,189::INFO::Processing pipeline 'morphologist.capsul.axon.splitbrain.SplitBrain'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,190::INFO::Processing pipeline 'morphologist.capsul.axon.spmsn3dtoaims.SPMsn3dToAims'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,191::INFO::Processing pipeline 'morphologist.capsul.axon.sulcigraph.SulciGraph'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,192::INFO::Processing pipeline 'morphologist.capsul.axon.sulcigraphmorphometrybysubject.sulcigraphmorphometrybysubject'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,192::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingann.SulciLabellingANN'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,193::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamglobal.SulciLabellingSPAMGlobal'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,194::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamlocal.SulciLabellingSPAMLocal'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,194::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,195::INFO::Processing pipeline 'morphologist.capsul.axon.sulciskeleton.SulciSkeleton'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,196::INFO::Processing pipeline 'morphologist.capsul.axon.t1biascorrection.T1BiasCorrection'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,197::INFO::Processing pipeline 'morphologist.capsul.axon.talairachtransformation.TalairachTransformation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,197::INFO::Processing pipeline 'morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,198::INFO::Processing pipeline 'morphologist.capsul.import_t1_mri.ImportT1Mri'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,198::INFO::Processing pipeline 'morphologist.capsul.morphologist_simple.MorphologistSimple'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,202::INFO::Processing pipeline 'morphologist.capsul.morphologist_viewer.MorphologistView'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,203::INFO::Processing pipeline 'morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,204::INFO::Processing pipeline 'morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,204::INFO::Writing index at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/process/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,205::INFO::process: '40' files written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/process.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,205::INFO::Writing module 'capsul' index at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,205::INFO::Index: an index has been written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,600::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,605::INFO::Processing pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,656::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline'...
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generating CAPSUL processes docs...
['/usr/bin/python3.10', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'morphologist.capsul', '-o', '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist', '--schema']
loading pickled environment... /casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:58,789::INFO::Processing pipeline 'morphologist.capsul.fslnormalization.FSLNormalization'...
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done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.3/sphinx/objects.inv...
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WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory 'doc/morphologist-ui-5.2/objects.inv' not fetchable due to <class 'FileNotFoundError'>: [Errno 2] No such file or directory: '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/doc/morphologist-ui-5.2/objects.inv'
[autosummary] generating autosummary for: index.rst, process_docs/morphologist/capsul/index.rst, process_docs/morphologist/capsul/pipeline/index.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst, ..., process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulciskeleton.SulciSkeleton.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.t1biascorrection.T1BiasCorrection.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformation.TalairachTransformation.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst, process_docs/morphologist/capsul/process/morphologist.capsul.import_t1_mri.ImportT1Mri.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_simple.MorphologistSimple.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_viewer.MorphologistView.rst, process_docs/morphologist/capsul/process/morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel.rst, process_docs/morphologist/capsul/process/morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst, sulpated.rst
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:59,482::INFO::Writing index at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:59,482::INFO::pipeline: '14' files written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline.
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-06-30 06:12:59,516::INFO::Index: an index has been written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul.
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['/usr/bin/python3.10', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'morphologist.capsul', '-o', '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist', '--schema']
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Finished: SUCCESS
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