Inverse deformation applied on volume

This tool enables to apply an inverse deformation (DISCO, DARTEL, DISCO+DARTEL) to a volume from a common space or from subjectA space to subjectB space created with Create DISCO+DARTEL deformation field toward the common space, Create DISCO+DARTEL deformation field from subjectA to subjectB, or Create DISCO deformation field from subjectA to subjectB.

1. Choose the volume to deform in data_in.

If data_in to be considered have been pre-processed before the Morphologist processing (add border to initial data), and if the final deformation field have been estimated from these initial data, choose Other in choice_native_data_in button.

2. Choose which destination space was chosen during the deformation field creation: CommonSpace or AnotherSubject (only if AfterDARTEL or AfterDISCODARTEL).

3. Choose the final display field to apply on the volume.

If AnotherSubject, choose whether the destination spaces considered to estimate the final deformation fields were those of subjects that have been directly proceeded with Morphologist (choice_native_data_dest = Morphologist nobias) or those of native data (choice_native_data_dest = Other).

4. Select the path and the name of the deformed volume.

Paramètres

study_type: Choice ( input )

data_in: ListOf( Volume 4D ) ( input )

interp: Choice ( input )

vectorinterpolation: Choice ( input )

final_space: Choice ( input )

choice_native_data_in: Choice ( input )

choice_native_data_dest: Choice ( input )

final_disp_field: ListOf( FFD Field defData DISCO DARTEL ) ( input )

data_out: ListOf( Volume 4D ) ( output )

Informations techniques

Toolbox : Disco

Niveau d'utilisateur : 1

Identifiant : DiscoDartelInverseWarping

Nom de fichier : brainvisa/toolboxes/disco/processes/Deformation/DiscoDartelInverseWarping.py

Supported file formats :

data_in :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

final_disp_field :

GIS image, GIS image

data_out :

gz compressed NIFTI-1 image, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIF image, GIS image, JPEG image, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, TIFF image, TIFF(.tif) image, VIDA image, XBM image, XPM image, gz compressed MINC image, gz compressed NIFTI-1 image