Deep learning - Segmentation Model Learning

None

Paramètres

ListOf_Input_Train_Volume: ListOf( Volume 3D ) ( input )

ListOf_Input_Train_Annotations: ListOf( Volume 3D ) ( input )

ListOf_Input_Validation_Volume: ListOf( Volume 3D ) ( optional, input )

ListOf_Input_Validation_Annotations: ListOf( Volume 3D ) ( optional, input )

Input_Model: Volume 3D ( optional, entrée )

Classes: Entier ( input )

Classes_Order: ListOf( Entier ) ( optional, input )

Dynamic_Scale_Factor: Réel ( input )

Dynamic_Scale_Offset: Réel ( input )

Patch_Size: ListOf( Entier ) ( input )

Pretrained: Booléen ( input )

Epochs: Entier ( input )

Batch_Size: Entier ( input )

Batch_Size_Validation: Entier ( input )

Fine_Tuning_Layers: Entier ( optional, input )

Allocate_GPUs: ListOf( Entier ) ( optional, input )

Checkpoints: Booléen ( input )

Verbose: Booléen ( input )

Ouptut_Model: Volume 3D ( sortie )

Informations techniques

Toolbox : Bioprocessing

Niveau d'utilisateur : 3

Identifiant : DLSegmentationModelLearn

Nom de fichier : brainvisa/toolboxes/bioprocessing/processes/research/projects/segmentation/DLSegmentationModelLearn.py

Supported file formats :

ListOf_Input_Train_Volume :

JPEG image, BMP image, GIF image, JPEG image, MNG image, PBM image, PGM image, PNG image, PPM image, TIFF image, TIFF(.tif) image, XBM image, XPM image

ListOf_Input_Train_Annotations :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

ListOf_Input_Validation_Volume :

JPEG image, BMP image, GIF image, JPEG image, MNG image, PBM image, PGM image, PNG image, PPM image, TIFF image, TIFF(.tif) image, XBM image, XPM image

ListOf_Input_Validation_Annotations :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Input_Model :

HDF5 File, HDF5 File

Ouptut_Model :

HDF5 File, HDF5 File