Graphe de sillons corticaux pour un hémisphère

None

Paramètres

skeleton: Cortex Skeleton ( entrée )

roots: Cortex Catchment Bassins ( entrée )

grey_white: Grey White Mask ( entrée )

hemi_cortex: CSF+GREY Mask ( entrée )

split_brain: Séparation du masque du cerveau ( optional, entrée )

white_mesh: Maillage de la matière blanche d'un hémisphère ( entrée )

pial_mesh: Maillage d'un hémisphère ( entrée )

commissure_coordinates: Commissure coordinates ( optional, entrée )

talairach_transform: Transform Raw T1 MRI to Talairach-AC/PC-Anatomist ( entrée )

compute_fold_meshes: Booléen ( input )

allow_multithreading: Booléen ( input )

graph_version: Choice ( input )

graph: Graphe de sillons corticaux ( sortie )

sulci_voronoi: Voronoï de sillons ( sortie )

write_cortex_mid_interface: Booléen ( input )

cortex_mid_interface: Grey White Mid-Interface Volume ( optional, sortie )

Informations techniques

Toolbox : Morphologist

Niveau d'utilisateur : 0

Identifiant : corticalfoldsgraph

Nom de fichier : brainvisa/toolboxes/morphologist/processes/segmentationpipeline/components/corticalfoldsgraph.py

Supported file formats :

skeleton :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

roots :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

grey_white :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

hemi_cortex :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

split_brain :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

white_mesh :

GIFTI file, GIFTI file, Maillage MESH, MNI OBJ mesh, PLY mesh, Maillage TRI

pial_mesh :

GIFTI file, GIFTI file, Maillage MESH, MNI OBJ mesh, PLY mesh, Maillage TRI

commissure_coordinates :

Commissure coordinates, Commissure coordinates

talairach_transform :

Transformation matrix, Transformation matrix

graph :

Graph and data, Graph and data

sulci_voronoi :

gz compressed NIFTI-1 image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image

cortex_mid_interface :

gz compressed NIFTI-1 image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image