[Volume] Morphological Opening

Morphological opening (chamfer)

Parameters

Input_Volume: 3D Volume ( input )

Source volume

• Volume of S16

Output_Directory: Directory ( optional, input )

Output_Volume: 3D Volume ( output )

Destination volume

• Volume of S16

Radius: Float ( input )

Radius of the structuring element

Distance_Mask_X: Integer ( optional, input )

X size of the distance mask [default=3]

Distance_Mask_Y: Integer ( optional, input )

Y size of the distance mask [default=3]

Distance_Mask_Z: Integer ( optional, input )

Z size of the distance mask [default=3]

Chamfer_M_Factor: Integer ( optional, input )

Chamfer multiplication factor [default=50]

Reader: String ( optional, input )

Force specific format reader

Technical information

Toolbox : Bioprocessing

User level : 3

Identifier : BasicOpening

File name : brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicOpening.py

Supported file formats :

Input_Volume :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Output_Directory :

Directory, Directory

Output_Volume :

gz compressed NIFTI-1 image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image