[Volume] SubSampling

Volume subsampling.

Parameters

Input_Volume: 3D Volume ( input )

Source volume

• Volume of U8
• Volume of U16
• Volume of U32
• Volume of S8
• Volume of S16
• Volume of S32
• Volume of FLOAT
• Volume of DOUBLE
• Volume of RGB
• Volume of RGBA

Output_Directory: Directory ( optional, input )

Output_Volume: 3D Volume ( output )

Output subsampled volume

• Same type as input

X_Aggregate: Integer ( optional, input )

X number of voxels to aggregate [default = 1]

Y_Aggregate: Integer ( optional, input )

Y number of voxels to aggregate [default = 1]

Z_Aggregate: Integer ( optional, input )

Z number of voxels to aggregate [default = 1]

Mode: Choice ( input )

Subsampling type :

• median
• mean
• minimum
• maximum
• majority
• difference
• sum
• notnullmean

[default = median]

Debug_Level: Integer ( optional, input )

Debug traces to print [default=0]

Verbose: Boolean ( optional, input )

Technical information

Toolbox : Bioprocessing

User level : 3

Identifier : BasicSubSampling

File name : brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicSubSampling.py

Supported file formats :

Input_Volume :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Output_Directory :

Directory, Directory

Output_Volume :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image