05. volume - CT scanner time series non linear registration

None

Parameters

Input_4dImage: 4D Volume ( input )

Reference_Frame_Number: Integer ( input )

Rigid_Registration: Boolean ( input )

Affine_Registration: Boolean ( input )

Ffd_Registration: Boolean ( input )

Optimization_Grid_Knot_Start: ListOf( Integer ) ( input )

Optimization_Grid_Knot_Stop: ListOf( Integer ) ( input )

Optimization_Grid_Knot_Step: ListOf( Integer ) ( input )

Optimization_Iteration_Coefficient: Integer ( input )

Optimization_Criterion_Stop: Float ( input )

Bins: Integer ( optional, input )

Output_4dImage: 4D Volume ( output )

Technical information

Toolbox : Bioprocessing

User level : 3

Identifier : CTTimeSeriesFfdRegistration

File name : brainvisa/toolboxes/bioprocessing/processes/research/projects/wip/cttimeseriesregistration/CTTimeSeriesFfdRegistration.py

Supported file formats :

Input_4dImage :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Output_4dImage :

gz compressed NIFTI-1 image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image