Change Template Referential

None

Parameters

side: Choice ( input )

mri_corrected: T1 MRI Bias Corrected ( input )

transformation_input: Transform Raw T1 MRI to Talairach-AC/PC-Anatomist ( input )

pole_template: Cingular Pole Template ( input )

talairach_to_subject: Talairach To Subject Transformation ( output )

subject_to_template: Subject To Template Transformation ( output )

template_pole_transformation: Template Pole To Talairach Tranformation ( input )

output_template: Cingular Pole Template Subject ( output )

Technical information

Toolbox : Cortical Surface

User level : 2

Identifier : ChangeTemplateReferential

File name : brainvisa/toolboxes/cortical_surface/processes/anatomy/obsolete/ChangeTemplateReferential.py

Supported file formats :

mri_corrected :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

transformation_input :

Transformation matrix, Transformation matrix

pole_template :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

talairach_to_subject :

Transformation matrix, Transformation matrix

subject_to_template :

Transformation matrix, Transformation matrix

template_pole_transformation :

Transformation matrix, Transformation matrix

output_template :

gz compressed NIFTI-1 image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image