ClearMap formats conversion

Image format conversion module with Aims and ClearMap librairies

Parameters

input: 3D Volume ( input )

format: Choice ( input )

output format

output: 3D Volume ( output )

Technical information

Toolbox : Bioprocessing

User level : 3

Identifier : ClearMapConvert

File name : brainvisa/toolboxes/bioprocessing/processes/research/projects/clearmap/ClearMapConvert.py

Supported file formats :

input :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

output :

gz compressed NIFTI-1 image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image