This process enables to calculate the bounding box parameters for each connected component using Voronoi diagram or directly from the mask.![]()
The bouding box calculation using Voronoi mode
Input_Volume_Label: 3D Volume ( input )Select the input labeled volume.
Voronoi_Mode: Boolean ( input )Enabling or disabling Vornoi mode.
Output_BoundingBox: Text file ( output )Enter the name of the output bounding box file.
Toolbox : Bioprocessing
User level : 3
Identifier :
ComputeBoundingBoxFromLabelFile name :
brainvisa/toolboxes/bioprocessing/processes/research/toolbox/ComputeBoundingBoxFromLabel.pySupported file formats :
Input_Volume_Label :gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 imageOutput_BoundingBox :Minf, Minf