Compute Cortical Fold Graph Upgrade From Old

Converts an older cortical folds graph (version 3.0 or 3.1) to a newer version (3.1 or 3.3)

Description

The "conversion" actually only recalculates the graph descriptors, and possibly rebuilds some relations. It keeps any existing labels or additional attributes.
For a more complete documentation, see the graph construction process which has the same output.

Note: graphs version 3.2 were transitional, have never been "official" and are unsupported anymore. You should use 3.3 (or newer) instead, and you can still convert them to 3.3.

Parameters

old_graph: Cortical folds graph ( input )

skeleton: Cortex Skeleton ( input )

graph_version: OpenChoice ( input )

graph: Cortical folds graph ( output )

commissure_coordinates: Commissure coordinates ( optional, input )

Talairach_transform: Transform Raw T1 MRI to Talairach-AC/PC-Anatomist ( input )

compute_fold_meshes: Boolean ( input )

allow_multithreading: Boolean ( input )

Technical information

Toolbox : Morphologist

User level : 2

Identifier : CorticalFoldsGraphUpgradeFromOld

File name : brainvisa/toolboxes/morphologist/processes/Sulci/graphmanipulations/CorticalFoldsGraphUpgradeFromOld.py

Supported file formats :

old_graph :

Graph and data, Graph and data

skeleton :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

graph :

Graph and data, Graph and data

commissure_coordinates :

Commissure coordinates, Commissure coordinates

Talairach_transform :

Transformation matrix, Transformation matrix