Feature Extraction

None

Parameters

Input_Image: 3D Volume ( input )

Mask_Image: 3D Volume ( optional, input )

Output_Directory: Directory ( optional, output )

Output_Image: 3D Volume ( optional, output )

RGB: ListOf( Choice ) ( input )

HSV: ListOf( Choice ) ( input )

XYZ: ListOf( Choice ) ( input )

LAB: ListOf( Choice ) ( input )

Gray: ListOf( Choice ) ( input )

Neighbourhood_Treatment: Boolean ( input )

Neighbourhood_Modes: ListOf( Choice ) ( optional, input )

Neighbourhood_Shape: Choice ( optional, input )

Neighbourhood_Amplitude: Integer ( optional, input )

Neighbourhood_Layers: ListOf( Integer ) ( optional, input )

Gabor_Treatment: Boolean ( input )

Gabor_Sigma: ListOf( Float ) ( optional, input )

Gabor_Theta: ListOf( Float ) ( optional, input )

Gabor_Lambda: ListOf( Float ) ( optional, input )

Gabor_Psi: ListOf( Float ) ( optional, input )

Gabor_Gamma: ListOf( Float ) ( optional, input )

Gabor_Real_Part: Boolean ( optional, input )

Gabor_Imaginary_Part: Boolean ( optional, input )

Texture_Treatment: Boolean ( input )

Texture_Types: ListOf( Choice ) ( optional, input )

Texture_LBP_Mode: Choice ( optional, input )

Texture_Amplitude: ListOf( Integer ) ( optional, input )

N_Jobs: Integer ( input )

Verbose: Boolean ( optional, input )

Technical information

Toolbox : BrainRAT

User level : 0

Identifier : FeatureExtraction

File name : brainvisa/toolboxes/brainrat/processes/toolbox/FeatureExtraction.py

Supported file formats :

Input_Image :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Mask_Image :

Graph and data, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Graph and data, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Output_Directory :

Directory, Directory

Output_Image :

gz compressed NIFTI-1 image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image