Mutual information transformation estimation

None

Parameters

Input_Volume: 3D Volume ( input )

Channel: Choice ( input )

Input_Volume_Reference: 3D Volume ( input )

Channel_Reference: Choice ( input )

Initialization_Threshold: Float ( optional, input )

Initialization_Reference_Threshold: Float ( optional, input )

Optimization_Index: Choice ( input )

Optimization_Method: Choice ( input )

Optimization_Criterion_Stop: Float ( input )

Parzen_Window_Size: Integer ( input )

Density_Function: Choice ( input )

Direct: Boolean ( input )

Output_Directory: Directory ( optional, output )

Output_Transformation: Transformation matrix ( output )

Technical information

Toolbox : BrainRAT

User level : 3

Identifier : MITransformationEstimation

File name : brainvisa/toolboxes/brainrat/processes/toolbox/registration/MITransformationEstimation.py

Supported file formats :

Input_Volume :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Input_Volume_Reference :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Output_Directory :

Directory, Directory

Output_Transformation :

Transformation matrix, Transformation matrix