Normalize intensities of a T1 MRI

None

Parameters

study_dir: DISCO Study Dir ( optional, input )

subjects_hierarchy: Save Subjects Hierarchy DISCO ( optional, input )

t1mri_nobias: T1 MRI Bias Corrected ( input )

histo_analysis: Histo Analysis ( input )

method: Choice ( input )

target_grey_level: Float ( input )

target_white_level: Float ( input )

t1mri_normalized: T1 MRI Bias Corrected Normalized ( output )

Technical information

Toolbox : Disco

User level : 1

Identifier : NormalizeT1MRI

File name : brainvisa/toolboxes/disco/processes/Tools/NormalizeT1MRI.py

Supported file formats :

study_dir :

Directory, Directory

subjects_hierarchy :

Text file, Text file

t1mri_nobias :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

histo_analysis :

Histo Analysis, Histo Analysis

t1mri_normalized :

gz compressed NIFTI-1 image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image