SPECT PVC pipeline

None

Parameters

analysis: String ( input )

PVC_method: Choice ( input )

SPECT: SPECT Volume ( input )

SPECT_PVC: SPECT Volume ( output )

striatum_labels: SPECT quantification ROI ( input )

brain_mask: Intracranial mask ( input )

intracranial_labels: SPECT intracranial labels ( output )

intracranial_labels_translation: SPECT intracranial labels translation ( output )

FWHM: String ( input )

FWHM_informations: FWHM informations ( optional, input )

Corrected_GTM_based_Uptake: GTM PVC based corrected images data ( optional, output )

Technical information

Toolbox : Nuclear Imaging

User level : 1

Identifier : datscan_pvc_pipeline

File name : brainvisa/toolboxes/nuclearimaging/processes/datscan/Preprocessing/datscan_pvc_pipeline.py

Supported file formats :

SPECT :

gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 image

SPECT_PVC :

gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 image

striatum_labels :

gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 image

brain_mask :

gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 image

intracranial_labels :

gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 image

intracranial_labels_translation :

JSON file, JSON file

FWHM_informations :

CSV file, CSV file

Corrected_GTM_based_Uptake :

CSV file, CSV file