Resample to Template Space

Resample to a common referential with a template

Description

In this variant of the resampling processes, the input transformation is going to a "standard" common referential (for instance the MNI space, or the AC/PC Talairach space). The template image should also have a transformation to this same space (generally just a translation and possibly axes switching). Both transformations are combined by the process to produce an output image in the template space (not directly the common referential).

Parameters

image: 4D Volume ( input )

transformation: Transformation matrix ( input )

interpolation: Choice ( input )

template_image: 4D Volume ( input )

resampled: 4D Volume ( output )

Technical information

Toolbox : Tools

User level : 0

Identifier : resampleToTemplateSpace

File name : brainvisa/toolboxes/tools/processes/registration/resampleToTemplateSpace.py

Supported file formats :

image :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

transformation :

Transformation matrix, Transformation matrix

template_image :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

resampled :

gz compressed NIFTI-1 image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image