[ANTs] Registration (Linear + Elastic Simplified)

None

Paramètres

input_fixed_image: Volume 3D ( entrée )

input_moving_image: Volume 3D ( entrée )

input_fixed_mask: Volume 3D ( optional, entrée )

input_moving_mask: Volume 3D ( optional, entrée )

image_dimension: Choice ( optional, input )

initialize: Choice ( optional, input )

initial_transform: ListOf( ANTs Transformation ) ( optional, input )

histogram_matching: Booléen ( optional, input )

clip_intensities: Booléen ( optional, input )

clip_lower_percentile: Réel ( optional, input )

clip_upper_percentile: Réel ( optional, input )

linear_transform: ListOf( Choice ) ( optional, input )

linear_gradient_step: Réel ( optional, input )

linear_metric: Choice ( optional, input )

linear_correlation_radius: OpenChoice ( optional, input )

linear_mutualinfo_bins: Entier ( optional, input )

linear_sampling: Choice ( optional, input )

linear_sampling_pct: Réel ( optional, input )

linear_pyr_levels: Entier ( optional, input )

linear_shrink_factor: ListOf( Entier ) ( optional, input )

linear_smoothing_sigma: ListOf( Entier ) ( optional, input )

linear_smoothing_unit: Choice ( optional, input )

linear_iter_max: ListOf( Entier ) ( optional, input )

linear_convergence_crit: Réel ( optional, input )

linear_convergence_window: Entier ( optional, input )

elastic_transform: Choice ( optional, input )

elastic_gradient_step: Réel ( optional, input )

elastic_update_field_variance: Entier ( optional, input )

elastic_total_field_variance: Entier ( optional, input )

elastic_update_field_mesh_size: Entier ( optional, input )

elastic_total_field_mesh_size: Entier ( optional, input )

elastic_spline_order: Entier ( optional, input )

elastic_metric: Choice ( optional, input )

elastic_correlation_radius: OpenChoice ( optional, input )

elastic_mutualinfo_bins: Entier ( optional, input )

elastic_sampling: Choice ( optional, input )

elastic_sampling_pct: Réel ( optional, input )

elastic_pyr_levels: Entier ( optional, input )

elastic_shrink_factor: ListOf( Entier ) ( optional, input )

elastic_smoothing_sigma: ListOf( Entier ) ( optional, input )

elastic_smoothing_unit: Choice ( optional, input )

elastic_iter_max: ListOf( Entier ) ( optional, input )

elastic_convergence_crit: Réel ( optional, input )

elastic_convergence_window: Entier ( optional, input )

precision: Choice ( optional, input )

nb_threads: Entier ( optional, input )

write_output_affine_transform: Booléen ( optional, input )

write_output_moving_to_fixed_warp: Booléen ( optional, input )

write_output_fixed_to_moving_warp: Booléen ( optional, input )

output_directory: Répertoire ( optional, entrée )

output_prefix: String ( optional, input )

output_affine_transform: ANTs Linear Transformation ( sortie )

output_moving_to_fixed_warp: ANTs Elastic Transformation ( sortie )

output_fixed_to_moving_warp: ANTs Elastic Transformation ( sortie )

Informations techniques

Toolbox : Bioprocessing

Niveau d'utilisateur : 0

Identifiant : antsRegistrationSimplified

Nom de fichier : brainvisa/toolboxes/bioprocessing/processes/research/registration/antsRegistrationSimplified.py

Supported file formats :

input_fixed_image :

gz compressed NIFTI-1 image, NIFTI-1 image, SPM image, gz compressed NIFTI-1 image, gz compressed SPM image

input_moving_image :

gz compressed NIFTI-1 image, NIFTI-1 image, SPM image, gz compressed NIFTI-1 image, gz compressed SPM image

input_fixed_mask :

gz compressed NIFTI-1 image, NIFTI-1 image, SPM image, gz compressed NIFTI-1 image, gz compressed SPM image

input_moving_mask :

gz compressed NIFTI-1 image, NIFTI-1 image, SPM image, gz compressed NIFTI-1 image, gz compressed SPM image

initial_transform :

Matlab file, Matlab file, NIFTI-1 image, SPM image, gz compressed NIFTI-1 image, gz compressed SPM image

output_directory :

Répertoire, Répertoire

output_affine_transform :

Matlab file, Matlab file

output_moving_to_fixed_warp :

gz compressed NIFTI-1 image, gz compressed NIFTI-1 image

output_fixed_to_moving_warp :

gz compressed NIFTI-1 image, gz compressed NIFTI-1 image