Check Freesurfer files

Before to launch the Freesurfer outputs To BrainVISA conversion pipeline or Freesurfer outputs To BrainVISA conversion pipeline, Light version , you can check if all files have been generated. This process is not mandatory to run pipelines.

Paramètres

leftPial: FreesurferType ( entrée )

Data computed either the "02 Launch Freesurfer full pipeline recon-all" process or directly by FreeSurfer.

leftWhite: FreesurferType ( entrée )

Data computed either the "02 Launch Freesurfer full pipeline recon-all" process or directly by FreeSurfer.

leftSphereReg: FreesurferType ( entrée )

Data computed either the "02 Launch Freesurfer full pipeline recon-all" process or directly by FreeSurfer.

leftThickness: FreesurferType ( entrée )

Data computed either the "02 Launch Freesurfer full pipeline recon-all" process or directly by FreeSurfer.

leftCurv: FreesurferType ( entrée )

Data computed either the "02 Launch Freesurfer full pipeline recon-all" process or directly by FreeSurfer.

leftAvgCurv: FreesurferType ( entrée )

Data computed either the "02 Launch Freesurfer full pipeline recon-all" process or directly by FreeSurfer.

leftCurvPial: FreesurferType ( entrée )

Data computed either the "02 Launch Freesurfer full pipeline recon-all" process or directly by FreeSurfer.

leftGyri: FreesurferGyriTexture ( entrée )

Data computed either the "02 Launch Freesurfer full pipeline recon-all" process or directly by FreeSurfer.

leftSulciGyri: FreesurferSulciGyriTexture ( entrée )

Data computed either the "02 Launch Freesurfer full pipeline recon-all" process or directly by FreeSurfer.

rightPial: FreesurferType ( entrée )

Data computed either the "02 Launch Freesurfer full pipeline recon-all" process or directly by FreeSurfer.

rightWhite: FreesurferType ( entrée )

Data computed either the "02 Launch Freesurfer full pipeline recon-all" process or directly by FreeSurfer.

rightSphereReg: FreesurferType ( entrée )

Data computed either the "02 Launch Freesurfer full pipeline recon-all" process or directly by FreeSurfer.

rightThickness: FreesurferType ( entrée )

Data computed either the "02 Launch Freesurfer full pipeline recon-all" process or directly by FreeSurfer.

rightCurv: FreesurferType ( entrée )

Data computed either the "02 Launch Freesurfer full pipeline recon-all" process or directly by FreeSurfer.

rightAvgCurv: FreesurferType ( entrée )

Data computed either the "02 Launch Freesurfer full pipeline recon-all" process or directly by FreeSurfer.

rightCurvPial: FreesurferType ( entrée )

Data computed either the "02 Launch Freesurfer full pipeline recon-all" process or directly by FreeSurfer.

rightGyri: FreesurferGyriTexture ( entrée )

Data computed either the "02 Launch Freesurfer full pipeline recon-all" process or directly by FreeSurfer.

rightSulciGyri: FreesurferSulciGyriTexture ( entrée )

Data computed either the "02 Launch Freesurfer full pipeline recon-all" process or directly by FreeSurfer.

Informations techniques

Toolbox : FreeSurfer

Niveau d'utilisateur : 1

Identifiant : freesurferFilesExist

Nom de fichier : brainvisa/toolboxes/freesurfer/processes/Tools/freesurferFilesExist.py

Supported file formats :

leftPial :

FreesurferPial, FreesurferPial

leftWhite :

FreesurferWhite, FreesurferWhite

leftSphereReg :

FreesurferSphereReg, FreesurferSphereReg

leftThickness :

FreesurferThickness, FreesurferThickness

leftCurv :

FreesurferCurv, FreesurferCurv

leftAvgCurv :

FreesurferAvgCurv, FreesurferAvgCurv

leftCurvPial :

FreesurferCurvPial, FreesurferCurvPial

leftGyri :

FreesurferParcellation, FreesurferParcellation

leftSulciGyri :

FreesurferParcellation, FreesurferParcellation

rightPial :

FreesurferPial, FreesurferPial

rightWhite :

FreesurferWhite, FreesurferWhite

rightSphereReg :

FreesurferSphereReg, FreesurferSphereReg

rightThickness :

FreesurferThickness, FreesurferThickness

rightCurv :

FreesurferCurv, FreesurferCurv

rightAvgCurv :

FreesurferAvgCurv, FreesurferAvgCurv

rightCurvPial :

FreesurferCurvPial, FreesurferCurvPial

rightGyri :

FreesurferParcellation, FreesurferParcellation

rightSulciGyri :

FreesurferParcellation, FreesurferParcellation