
    AimsClusterArg
    --------------

Builds a graph (cluster graph) from an image

Options :

-i | --input <file name (read only): { Volume of FLOAT, Volume of S16, Volume
    of U8 }>  input data

[ -o | --output <string> ]
    output .arg graph file (default: <input>.arg)

[ -g | --graphtype <string> ]
    graph type to produce: c (cluster) or f (cortical folds). default: cluster

[ -t | --trans <string> ]
    transformation matrix to Talairach space (default: none)

[ -c | --connectivity <string> ]
    connectivity type (4xy / 4xz / 4yz / 6 / 8xy / 8xz / 8yz / 18 / 26),
    default: 18

[ -s | --size <S32> ]
    min cluster size (default: 0)

[ -b | --binarize <boolean> ]
    binarize volume (after thresholding) before processing connectivity stuff

[ -l | --lowth <FLOAT> ]
    lower threshold, values under this one are set to zero (background)
    (default: none)

[ -u | --upth <FLOAT> ]
    upper threshold, values above this one are set to zero (background)
    (default: none)

[ -m | --mesh <boolean> ]
    make cluster meshes (default: y)

[ --deciMaxClearance <FLOAT> ]
    maximum clearance of the decimated mesh expected is <clearance> mm
    [default=5.]

[ --deciMaxError <FLOAT> ]
    maximum error distance from the original mesh expected is <error> mm ,
    [default=0.1]

[ --minFacetNumber <U32> ]
    minimum number of facets to allow decimation [default=50]

[ --output_4d_volumes <S32> ]
    Write 4D images as several 3D files (0 = series of 3D volumes, 1 = one 4D
    volume, no value = use .aimsrc configuration files)

[ --debugLevel <S32> ]
    Set debug information level (default = 0)

[ --verbose [ <S32> ] ]
    Set verbosity level (default = 0, without value = 1)

[ -h | --help <boolean> ]
    show help message

[ --version <boolean> ]
    show Cartograph version

[ --info <boolean> ]
    show libraries information (install, plugins, paths, etc.)

[ --optionsfile <string> ]
    Read additional commandline options from the specified file (one switch or
    value per line)

