Capsul

morphologist.capsul.capsul: User Guide

morphologist.capsul.capsul: API

The API of functions and classes, as given by the docstrings.

Buildingblocks

axon.acpcorientation.AcpcOrientation
axon.aimsconverter.AimsConverter
axon.baladinnormalizationtoaims.BaladinNormalizationToAims
axon.brainsegmentation.BrainSegmentation
axon.fslnormalizationtoaims.FSLnormalizationToAims
axon.greywhiteclassificationhemi.GreyWhiteClassificationHemi
axon.greywhitemesh.GreyWhiteMesh
axon.greywhitetopology.GreyWhiteTopology
axon.histoanalysis.HistoAnalysis
axon.importt1mri.ImportT1MRI
axon.morphologistprocess.morphologistProcess
axon.normalization_aimsmiregister.normalization_aimsmiregister
axon.normalization_baladin.Normalization_Baladin
axon.normalization_fsl_reinit.Normalization_FSL_reinit
axon.normalization_spm_reinit.Normalization_SPM_reinit
axon.normalization_t1_spm12_reinit.normalization_t1_spm12_reinit
axon.normalization_t1_spm8_reinit.normalization_t1_spm8_reinit
axon.pialmesh.PialMesh
axon.reorientanatomy.ReorientAnatomy
axon.scalpmesh.ScalpMesh
axon.skullstripping.skullstripping
axon.splitbrain.SplitBrain
axon.spmsn3dtoaims.SPMsn3dToAims
axon.sulcigraph.SulciGraph
axon.sulcigraphmorphometrybysubject.sulcigraphmorphometrybysubject
axon.sulcilabellingann.SulciLabellingANN
axon.sulcilabellingspamglobal.SulciLabellingSPAMGlobal
axon.sulcilabellingspamlocal.SulciLabellingSPAMLocal
axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov
axon.sulciskeleton.SulciSkeleton
axon.t1biascorrection.T1BiasCorrection
axon.talairachtransformation.TalairachTransformation
axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization
import_t1_mri.ImportT1Mri
morphologist_simple.MorphologistSimple
morphologist_viewer.MorphologistView
sulci_manip.graph_pointcloud_label.GraphPointCloudLabel Split graph vertices according to sub-vertex label classification
talairachtransformationfromnormalization.TalairachTransformationFromNormalization