interfile.h

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#ifndef interfile_h
#define interfile_h
 
#include "matrix.h"
#ifdef ultrix
extern char* strdup();
#endif
 
/* 
 *  sccsid = "@(#)interfile.h   1.3  UCL-TOPO   96/05/29"
 *
 *  Copyright (C) 1995 University of Louvain, Louvain-la-Neuve, Belgium
 *
 *  Author : <Merence Sibomana> Sibomana@topo.ucl.ac.be
 *
 *        Positron Emission Tomography Laboratory
 *        Universite Catholique de Louvain
 *        Ch. du Cyclotron, 2
 *        B-1348 Louvain-la-Neuve
 *                Belgium
 *
 *  This program may be used free of charge by the members
 *  of all academic and/or scientific institutions.
 *         ANY OTHER USE IS PROHIBITED.
 *  It may also be included in any package
 *        -  provided that this text is not removed from
 *        the source code and that reference to this original
 *        work is done ;
 *        - provided that this package is itself available
 *        for use, free of charge, to the members of all
 *        academic and/or scientific institutions.
 *  Nor the author, nor the Universite Catholique de Louvain, in any
 *  way guarantee that this program will fullfill any particular
 *  requirement, nor even that its use will always be harmless.
 *
 *
 */
 
/* only one energy window, static tomographic data supported */
 
typedef enum {
        VERSION_OF_KEYS,
        IMAGE_MODALITY,
        ORIGINAL_INSTITUTION,
        ORIGINATING_SYSTEM,
        NAME_OF_DATA_FILE,
        DATA_STARTING_BLOCK,
        DATA_OFFSET_IN_BYTES,
        PATIENT_ID,
        PATIENT_DOB,         /* date format is YYYY:MM:DD */
        PATIENT_SEX,
        STUDY_ID,
        EXAM_TYPE,
        DATA_COMPRESSION,
        DATA_ENCODE,
        TYPE_OF_DATA,
        TOTAL_NUMBER_OF_IMAGES,
        STUDY_DATE,
        STUDY_TIME,           /* Time Format is hh:mm:ss */
        IMAGEDATA_BYTE_ORDER,
        NUMBER_OF_WINDOWS,     /* Number of energy windows */
        NUMBER_OF_IMAGES,       /* Number of images/energy window */
        PROCESS_STATUS,
        NUMBER_OF_DIMENSIONS,
        MATRIX_SIZE_1,
        MATRIX_SIZE_2,
        MATRIX_SIZE_3,
        NUMBER_FORMAT,
        NUMBER_OF_BYTES_PER_PIXEL,
        SCALE_FACTOR_1,
        SCALE_FACTOR_2,
        SCALE_FACTOR_3,
        IMAGE_DURATION,
        IMAGE_START_TIME,
        IMAGE_NUMBER,
        LABEL,
        MAXIMUM_PIXEL_COUNT,
        TOTAL_COUNTS,
/*
 My Extensions
*/
        QUANTIFICATION_UNITS,       /* scale_factor units; eg 10e-3 counts/seconds */
        COLORTAB,
        DISPLAY_RANGE,
        IMAGE_EXTREMA,
        REAL_EXTREMA,
        INTERPOLABILITY,
        MATRIX_INITIAL_ELEMENT_1,
        MATRIX_INITIAL_ELEMENT_2,
        MATRIX_INITIAL_ELEMENT_3,
        ATLAS_ORIGIN_1,
        ATLAS_ORIGIN_2,
        ATLAS_ORIGIN_3,
        TRANSFORMER,
        END_OF_INTERFILE
} InterfileKeys;
 
typedef enum {
        STATIC,
        DYNAMIC,
        GATED,
        TOMOGRAPHIC,
        CURVE,
        ROI,
        OTHER,
/* My Externsion */
        CLICHE                    /* with a fixed colormap */
}       TypeOfData;
 
typedef enum {
        UNSIGNED_INTEGER,
        SIGNED_INTEGER,
        SHORT_FLOAT,
        LONG_FLOAT,
/* My Externsion */
        COLOR_PIXEL
} NumberFormat;
 
typedef struct _InterfileItem {
        int key;
        char* value;
} InterfileItem;
 
extern InterfileItem used_keys[];
 
#if defined(__STDC__) || defined(__cplusplus)
#if defined(__cplusplus)
extern "C" {
/*
 * high level user functions
 */
#endif
int interfile_write_volume(MatrixFile* mptr, char *image_name,char *header_name,
                u_char* data_matrix, int size);
char *is_interfile(const char*);
int interfile_open(MatrixFile*);
MatrixData *interfile_read_slice(FILE*, char** ifh, MatrixData*, int slice,
        int u_flag);
int interfile_read(MatrixFile *mptr,int matnum, 
        MatrixData  *data, int dtype);
#if defined(__cplusplus)
}
#endif
#else /* __cplusplus */
extern char *is_interfile();
extern int interfile_open();
extern MatrixData *interfile_read_slice();
extern int interfile_read();
extern int interfile_write_volume();
#endif
#endif