would it be possible to subtract the T1 post resection from the T1 pre resection ?
that could help me.
I have the transformation matrix so I can see them coregistered on anatomist. But I don't know how to subtract the two images. I can do the fusion, but not the subtraction for now.
Search found 39 matches
- Wed Feb 24, 2016 1:06 pm
- Forum: BrainVISA
- Topic: lesion segmentation
- Replies: 10
- Views: 8541
- Wed Feb 03, 2016 1:57 pm
- Forum: BrainVISA
- Topic: lesion segmentation
- Replies: 10
- Views: 8541
Re: lesion segmentation
thanks.
I'll take a look at the magic brush soon.
I'll take a look at the magic brush soon.
- Wed Jan 27, 2016 8:27 am
- Forum: BrainVISA
- Topic: brainvisa 4.5 hierarchy 3.2.0: center/protocol
- Replies: 2
- Views: 3796
Re: brainvisa 4.5 hierarchy 3.2.0: center/protocol
ok thanks for the really well detailed answer. we based everything on protocols as we have many different protocols performed and it allows us to sort automatically the patients depending on the implantation sites, pathologies etc ... I don't know yet how we will do, have to think about it. but we n...
- Tue Jan 26, 2016 4:30 pm
- Forum: BrainVISA
- Topic: brainvisa 4.5 hierarchy 3.2.0: center/protocol
- Replies: 2
- Views: 3796
brainvisa 4.5 hierarchy 3.2.0: center/protocol
Hi, In the hierarchy 3.2.0 used in brainvisa 4.5, you removed the "protocol" directory and replaced it with "center". is that permanent ? we liked the protocol directory :) and the toolbox we are developing (with manik) use protocols to filter the subject as we have epilepsy data...
- Mon Jan 25, 2016 3:30 pm
- Forum: BrainVISA
- Topic: lesion segmentation
- Replies: 10
- Views: 8541
lesion segmentation
Hi,
is there a tool in brainvisa to automatically perform a 3D ROI of a lesion (part of the brain removed, so no need of a crazy algorithm).
is there a tool in brainvisa to automatically perform a 3D ROI of a lesion (part of the brain removed, so no need of a crazy algorithm).
- Thu Jan 14, 2016 5:34 pm
- Forum: Anatomist
- Topic: command line clip
- Replies: 3
- Views: 13660
Re: command line clip
sorry it works.
sorry it works.
I don't know what I changed, but it works now ...
thanks !
sorry it works.
I don't know what I changed, but it works now ...
thanks !
- Thu Jan 14, 2016 5:14 pm
- Forum: Anatomist
- Topic: command line clip
- Replies: 3
- Views: 13660
Re: command line clip
Hi,
thanks a lot for the answer.
I tried it and I got this:
prop: clip_distance
prop: clipping
prop: window
Exception in command/history writer: missing semantic attribute windows in WindowConfig / command type: WindowConfig
<anatomist.cpp.RegularCommand object at 0x812a628>
thanks a lot for the answer.
I tried it and I got this:
prop: clip_distance
prop: clipping
prop: window
Exception in command/history writer: missing semantic attribute windows in WindowConfig / command type: WindowConfig
<anatomist.cpp.RegularCommand object at 0x812a628>
- Thu Jan 14, 2016 2:50 pm
- Forum: Anatomist
- Topic: command line clip
- Replies: 3
- Views: 13660
command line clip
Hello, I am trying to make a "checkbox button" to remove of the 3D view all object distant by more than 5 mm from the current plane. I can do it "manually" when I have the 3D viewer by clicking on "Scene" -> "Tools" -> in the submenu "Clipping Plane"...
- Fri Oct 30, 2015 4:05 pm
- Forum: BrainVISA
- Topic: morphologist: running sulci identification from python
- Replies: 0
- Views: 34921
morphologist: running sulci identification from python
Hello, I am trying to run the sulci identification step from morphologist using python (from the IntrAnatElect toolbox). currently I have this command line: self.brainvisaContext.runInteractiveProcess(myCallback, 'Morphologist 2012', mri = self.mriAcPc, Normalised='No', Anterior_Commissure = self.Ac...