BrainVISA

I am trying to register a func image to the correspondiong anat and write the transformed image. As you can see on the snapshot (left= original image ; Middle = anat ; right = transformed) the registration worked very well, but the transformed image has the same field of view than the original, hence part of the brain is missing..I would like the tranformed image to have the same FOV than the anatomy. How can i do that please ?



Thanks a lot,

Bruno

Hi,

I suppose you used AimsMIRegister then AimsResample in order to obtain your result, isn't it ?
You can use some options with the AimsResample command to change the size of the output.
These options are the following:
[ --dx <S32> ] dimx of the resampled volume
[ --dy <S32> ] dimy of the resampled volume
[ --dz <S32> ] dimz of the resampled volume

Do you know this part of documentation ? http://brainvisa.info/doc/aimsdata-4.3/ ... ining%book
You could find some tricks on aims command.

Isa