Aimsgraphmesh: Extended NeighboorhoodSegmentation fault
Posted: Thu Sep 05, 2013 3:00 am
Hello, I'm fairly new to this software so I apologize if this topic is covered somewhere else or if it's a simple fix.
I'm having issues while using Aimsgraphmesh to create meshes from .arg files. That process initiates fine in terminal for a bit but after a little while it stops and says : "extended neighborhoodSegmentation fault". Sometimes it also says "neighboorhoodBus error."
Example of the terminal output:
Clearing interface : done
Reading slice : 5
getting interface : done
processing mesh : done
clearing interface : done
reading slice : 20
getting interface : done
processing mesh : [ 1, 1] Extended neighboorhoodSegmentation fault (core dumped)
This occurs when I run it on mac osx 10.6.8 or Ubuntu 12.04 with either 32 or 64 bit versions of brianvisa installed. I've also tried using different brain sections (compiled using brainra into .ima then converted with Aimsgraphconvert to .arg), smaller number of initial brain slices, larger numbers of brain slices, (only the prettiest tissue samples of course).
Any suggestions? Any additionally information I can add that may help?
Thank you in advance
I'm having issues while using Aimsgraphmesh to create meshes from .arg files. That process initiates fine in terminal for a bit but after a little while it stops and says : "extended neighborhoodSegmentation fault". Sometimes it also says "neighboorhoodBus error."
Example of the terminal output:
Clearing interface : done
Reading slice : 5
getting interface : done
processing mesh : done
clearing interface : done
reading slice : 20
getting interface : done
processing mesh : [ 1, 1] Extended neighboorhoodSegmentation fault (core dumped)
This occurs when I run it on mac osx 10.6.8 or Ubuntu 12.04 with either 32 or 64 bit versions of brianvisa installed. I've also tried using different brain sections (compiled using brainra into .ima then converted with Aimsgraphconvert to .arg), smaller number of initial brain slices, larger numbers of brain slices, (only the prettiest tissue samples of course).
Any suggestions? Any additionally information I can add that may help?
Thank you in advance