morphologist.capsul.axon.axonmorphologist.AxonMorphologist¶
AxonMorphologist¶
Note
- Type ‘AxonMorphologist.help()’ for a full description of this process parameters.
- Type ‘<AxonMorphologist>.get_input_spec()’ for a full description of this process input trait types.
- Type ‘<AxonMorphologist>.get_output_spec()’ for a full description of this process output trait types.
Inputs¶
[Mandatory]
- nodes_activation: a legal value ([‘ControllerTrait’] - mandatory)
- No description.
- t1mri: a file name ([‘File’] - mandatory)
- No description.
- anterior_commissure: a legal value ([‘List_Float’] - mandatory)
- No description.
- posterior_commissure: a legal value ([‘List_Float’] - mandatory)
- No description.
- interhemispheric_point: a legal value ([‘List_Float’] - mandatory)
- No description.
- left_hemisphere_point: a legal value ([‘List_Float’] - mandatory)
- No description.
- CorticalFoldsGraph_graph_version: a legal value ([‘Enum’] - mandatory)
- No description.
[Optional]
- PrepareSubject_select_AC_PC_Or_Normalization: a legal value ([‘Enum’] - optional)
- No description.
- PrepareSubject_allow_flip_initial_MRI: a boolean ([‘Bool’] - optional)
- No description.
- PrepareSubject_StandardACPC_Normalised: a legal value ([‘Enum’] - optional)
- No description.
- PrepareSubject_StandardACPC_remove_older_MNI_normalization: a boolean ([‘Bool’] - optional)
- No description.
- PrepareSubject_StandardACPC_older_MNI_normalization: a file name ([‘File’] - optional)
- No description.
- PrepareSubject_Normalization_select_Normalization_pipeline: a legal value ([‘Enum’] - optional)
- No description.
- PrepareSubject_Normalization_commissures_coordinates: a file name ([‘File’] - optional)
- No description.
- PrepareSubject_Normalization_init_translation_origin: a legal value ([‘Enum’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeFSL_template: a file name ([‘File’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeFSL_alignment: a legal value ([‘Enum’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeFSL_set_transformation_in_source_volume: a boolean ([‘Bool’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeFSL_allow_retry_initialization: a boolean ([‘Bool’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeFSL_NormalizeFSL_cost_function: a legal value ([‘Enum’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeFSL_NormalizeFSL_search_cost_function: a legal value ([‘Enum’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeFSL_ConvertFSLnormalizationToAIMS_standard_template: a legal value ([‘Enum’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeSPM_NormalizeSPM: a legal value ([‘Enum’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeSPM_template: a file name ([‘File’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeSPM_allow_retry_initialization: a boolean ([‘Bool’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeSPM_voxel_size: a legal value ([‘Enum’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeSPM_cutoff_option: an integer (int or long) ([‘Int’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeSPM_nbiteration: an integer (int or long) ([‘Int’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeSPM_ConvertSPMnormalizationToAIMS_target: a legal value ([‘Enum’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeSPM_ConvertSPMnormalizationToAIMS_normalized_volume: a file name ([‘File’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeSPM_ConvertSPMnormalizationToAIMS_removeSource: a boolean ([‘Bool’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeBaladin_template: a file name ([‘File’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeBaladin_set_transformation_in_source_volume: a boolean ([‘Bool’] - optional)
- No description.
- PrepareSubject_Normalization_Normalization_AimsMIRegister_anatomical_template: a file name ([‘File’] - optional)
- No description.
- PrepareSubject_Normalization_Normalization_AimsMIRegister_mni_to_acpc: a file name ([‘File’] - optional)
- No description.
- PrepareSubject_Normalization_Normalization_AimsMIRegister_smoothing: a float ([‘Float’] - optional)
- No description.
- PrepareSubject_TalairachFromNormalization_source_referential: a file name ([‘File’] - optional)
- No description.
- PrepareSubject_TalairachFromNormalization_normalized_referential: a file name ([‘File’] - optional)
- No description.
- PrepareSubject_TalairachFromNormalization_acpc_referential: a file name ([‘File’] - optional)
- No description.
- PrepareSubject_TalairachFromNormalization_transform_chain_ACPC_to_Normalized: a file name ([‘File’] - optional)
- No description.
- BiasCorrection_sampling: a float ([‘Float’] - optional)
- No description.
- BiasCorrection_field_rigidity: a float ([‘Float’] - optional)
- No description.
- BiasCorrection_zdir_multiply_regul: a float ([‘Float’] - optional)
- No description.
- BiasCorrection_wridges_weight: a float ([‘Float’] - optional)
- No description.
- BiasCorrection_ngrid: an integer (int or long) ([‘Int’] - optional)
- No description.
- BiasCorrection_delete_last_n_slices: a unicode string ([‘Str’] - optional)
- No description.
- BiasCorrection_mode: a legal value ([‘Enum’] - optional)
- No description.
- BiasCorrection_write_field: a legal value ([‘Enum’] - optional)
- No description.
- BiasCorrection_write_hfiltered: a legal value ([‘Enum’] - optional)
- No description.
- BiasCorrection_write_wridges: a legal value ([‘Enum’] - optional)
- No description.
- BiasCorrection_variance_fraction: an integer (int or long) ([‘Int’] - optional)
- No description.
- BiasCorrection_write_variance: a legal value ([‘Enum’] - optional)
- No description.
- BiasCorrection_edge_mask: a legal value ([‘Enum’] - optional)
- No description.
- BiasCorrection_write_edges: a legal value ([‘Enum’] - optional)
- No description.
- BiasCorrection_write_meancurvature: a legal value ([‘Enum’] - optional)
- No description.
- BiasCorrection_fix_random_seed: a boolean ([‘Bool’] - optional)
- No description.
- BiasCorrection_modality: a legal value ([‘Enum’] - optional)
- No description.
- BiasCorrection_use_existing_ridges: a boolean ([‘Bool’] - optional)
- No description.
- HistoAnalysis_use_hfiltered: a boolean ([‘Bool’] - optional)
- No description.
- HistoAnalysis_use_wridges: a boolean ([‘Bool’] - optional)
- No description.
- HistoAnalysis_undersampling: a legal value ([‘Enum’] - optional)
- No description.
- HistoAnalysis_fix_random_seed: a boolean ([‘Bool’] - optional)
- No description.
- BrainSegmentation_lesion_mask: a file name ([‘File’] - optional)
- No description.
- BrainSegmentation_lesion_mask_mode: a legal value ([‘Enum’] - optional)
- No description.
- BrainSegmentation_variant: a legal value ([‘Enum’] - optional)
- No description.
- BrainSegmentation_erosion_size: a float ([‘Float’] - optional)
- No description.
- BrainSegmentation_visu: a legal value ([‘Enum’] - optional)
- No description.
- BrainSegmentation_layer: a legal value ([‘Enum’] - optional)
- No description.
- BrainSegmentation_first_slice: an integer (int or long) ([‘Int’] - optional)
- No description.
- BrainSegmentation_last_slice: an integer (int or long) ([‘Int’] - optional)
- No description.
- BrainSegmentation_fix_random_seed: a boolean ([‘Bool’] - optional)
- No description.
- Renorm_template: a file name ([‘File’] - optional)
- No description.
- Renorm_Normalization_select_Normalization_pipeline: a legal value ([‘Enum’] - optional)
- No description.
- Renorm_Normalization_allow_flip_initial_MRI: a boolean ([‘Bool’] - optional)
- No description.
- Renorm_Normalization_commissures_coordinates: a file name ([‘File’] - optional)
- No description.
- Renorm_Normalization_init_translation_origin: a legal value ([‘Enum’] - optional)
- No description.
- Renorm_Normalization_NormalizeFSL_alignment: a legal value ([‘Enum’] - optional)
- No description.
- Renorm_Normalization_NormalizeFSL_set_transformation_in_source_volume: a boolean ([‘Bool’] - optional)
- No description.
- Renorm_Normalization_NormalizeFSL_allow_retry_initialization: a boolean ([‘Bool’] - optional)
- No description.
- Renorm_Normalization_NormalizeFSL_NormalizeFSL_cost_function: a legal value ([‘Enum’] - optional)
- No description.
- Renorm_Normalization_NormalizeFSL_NormalizeFSL_search_cost_function: a legal value ([‘Enum’] - optional)
- No description.
- Renorm_Normalization_NormalizeFSL_ConvertFSLnormalizationToAIMS_standard_template: a legal value ([‘Enum’] - optional)
- No description.
- Renorm_Normalization_NormalizeSPM_NormalizeSPM: a legal value ([‘Enum’] - optional)
- No description.
- Renorm_Normalization_NormalizeSPM_allow_retry_initialization: a boolean ([‘Bool’] - optional)
- No description.
- Renorm_Normalization_NormalizeSPM_voxel_size: a legal value ([‘Enum’] - optional)
- No description.
- Renorm_Normalization_NormalizeSPM_cutoff_option: an integer (int or long) ([‘Int’] - optional)
- No description.
- Renorm_Normalization_NormalizeSPM_nbiteration: an integer (int or long) ([‘Int’] - optional)
- No description.
- Renorm_Normalization_NormalizeSPM_ConvertSPMnormalizationToAIMS_target: a legal value ([‘Enum’] - optional)
- No description.
- Renorm_Normalization_NormalizeSPM_ConvertSPMnormalizationToAIMS_normalized_volume: a file name ([‘File’] - optional)
- No description.
- Renorm_Normalization_NormalizeSPM_ConvertSPMnormalizationToAIMS_removeSource: a boolean ([‘Bool’] - optional)
- No description.
- Renorm_Normalization_NormalizeBaladin_set_transformation_in_source_volume: a boolean ([‘Bool’] - optional)
- No description.
- Renorm_Normalization_Normalization_AimsMIRegister_mni_to_acpc: a file name ([‘File’] - optional)
- No description.
- Renorm_Normalization_Normalization_AimsMIRegister_smoothing: a float ([‘Float’] - optional)
- No description.
- Renorm_TalairachFromNormalization_source_referential: a file name ([‘File’] - optional)
- No description.
- Renorm_TalairachFromNormalization_normalized_referential: a file name ([‘File’] - optional)
- No description.
- Renorm_TalairachFromNormalization_acpc_referential: a file name ([‘File’] - optional)
- No description.
- Renorm_TalairachFromNormalization_transform_chain_ACPC_to_Normalized: a file name ([‘File’] - optional)
- No description.
- SplitBrain_use_ridges: a boolean ([‘Bool’] - optional)
- No description.
- SplitBrain_use_template: a boolean ([‘Bool’] - optional)
- No description.
- SplitBrain_split_template: a file name ([‘File’] - optional)
- No description.
- SplitBrain_mode: a legal value ([‘Enum’] - optional)
- No description.
- SplitBrain_variant: a legal value ([‘Enum’] - optional)
- No description.
- SplitBrain_bary_factor: a legal value ([‘Enum’] - optional)
- No description.
- SplitBrain_mult_factor: a legal value ([‘Enum’] - optional)
- No description.
- SplitBrain_initial_erosion: a float ([‘Float’] - optional)
- No description.
- SplitBrain_cc_min_size: an integer (int or long) ([‘Int’] - optional)
- No description.
- SplitBrain_fix_random_seed: a boolean ([‘Bool’] - optional)
- No description.
- HeadMesh_keep_head_mask: a boolean ([‘Bool’] - optional)
- No description.
- HeadMesh_remove_mask: a file name ([‘File’] - optional)
- No description.
- HeadMesh_first_slice: an integer (int or long) ([‘Int’] - optional)
- No description.
- HeadMesh_threshold: an integer (int or long) ([‘Int’] - optional)
- No description.
- HeadMesh_closing: a float ([‘Float’] - optional)
- No description.
- HeadMesh_threshold_mode: a legal value ([‘Enum’] - optional)
- No description.
- SulcalMorphometry_sulci_file: a file name ([‘File’] - optional)
- No description.
- SulcalMorphometry_use_attribute: a legal value ([‘Enum’] - optional)
- No description.
- GreyWhiteClassification_lesion_mask: a file name ([‘File’] - optional)
- No description.
- GreyWhiteClassification_lesion_mask_mode: a legal value ([‘Enum’] - optional)
- No description.
- GreyWhiteClassification_fix_random_seed: a boolean ([‘Bool’] - optional)
- No description.
- GreyWhiteTopology_version: a legal value ([‘Enum’] - optional)
- No description.
- GreyWhiteTopology_fix_random_seed: a boolean ([‘Bool’] - optional)
- No description.
- SulciSkeleton_version: a legal value ([‘Enum’] - optional)
- No description.
- SulciSkeleton_fix_random_seed: a boolean ([‘Bool’] - optional)
- No description.
- PialMesh_version: a legal value ([‘Enum’] - optional)
- No description.
- PialMesh_fix_random_seed: a boolean ([‘Bool’] - optional)
- No description.
- CorticalFoldsGraph_compute_fold_meshes: a boolean ([‘Bool’] - optional)
- No description.
- CorticalFoldsGraph_allow_multithreading: a boolean ([‘Bool’] - optional)
- No description.
- CorticalFoldsGraph_write_cortex_mid_interface: a boolean ([‘Bool’] - optional)
- No description.
- SulciRecognition_select_Sulci_Recognition: a legal value ([‘Enum’] - optional)
- No description.
- SulciRecognition_fix_random_seed: a boolean ([‘Bool’] - optional)
- No description.
- SulciRecognition_recognition2000_model: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_recognition2000_model_hint: a legal value ([‘Enum’] - optional)
- No description.
- SulciRecognition_recognition2000_rate: a float ([‘Float’] - optional)
- No description.
- SulciRecognition_recognition2000_stopRate: a float ([‘Float’] - optional)
- No description.
- SulciRecognition_recognition2000_niterBelowStopProp: an integer (int or long) ([‘Int’] - optional)
- No description.
- SulciRecognition_recognition2000_forbid_unknown_label: a boolean ([‘Bool’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_local_or_markovian: a legal value ([‘Enum’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_global_recognition_labels_translation_map: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_global_recognition_initial_transformation: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_global_recognition_labels_priors: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_global_recognition_model_type: a legal value ([‘Enum’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_global_recognition_model: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_local_recognition_model: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_local_recognition_local_referentials: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_local_recognition_direction_priors: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_local_recognition_angle_priors: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_local_recognition_translation_priors: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_markovian_recognition_model: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_markovian_recognition_segments_relations_model: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_CNN_recognition19_model_file: a file name ([‘File’] - optional)
- file (.mdsm) storing neural network parameters
- SulciRecognition_CNN_recognition19_param_file: a file name ([‘File’] - optional)
- file (.json) storing the hyperparameters (cutting threshold)
- SulciRecognition_CNN_recognition19_rebuild_attributes: a boolean ([‘Bool’] - optional)
- No description.
- SulciRecognition_CNN_recognition19_allow_multithreading: a boolean ([‘Bool’] - optional)
- No description.
- SulciRecognition_CNN_recognition19_cuda: an integer (int or long) ([‘Int’] - optional)
- device on which to run the training(-1 for cpu, i>=0 for the i-th gpu)
- GreyWhiteClassification_1_lesion_mask: a file name ([‘File’] - optional)
- No description.
- GreyWhiteClassification_1_lesion_mask_mode: a legal value ([‘Enum’] - optional)
- No description.
- GreyWhiteClassification_1_fix_random_seed: a boolean ([‘Bool’] - optional)
- No description.
- GreyWhiteTopology_1_version: a legal value ([‘Enum’] - optional)
- No description.
- GreyWhiteTopology_1_fix_random_seed: a boolean ([‘Bool’] - optional)
- No description.
- SulciSkeleton_1_version: a legal value ([‘Enum’] - optional)
- No description.
- SulciSkeleton_1_fix_random_seed: a boolean ([‘Bool’] - optional)
- No description.
- PialMesh_1_version: a legal value ([‘Enum’] - optional)
- No description.
- PialMesh_1_fix_random_seed: a boolean ([‘Bool’] - optional)
- No description.
- CorticalFoldsGraph_1_compute_fold_meshes: a boolean ([‘Bool’] - optional)
- No description.
- CorticalFoldsGraph_1_allow_multithreading: a boolean ([‘Bool’] - optional)
- No description.
- CorticalFoldsGraph_1_write_cortex_mid_interface: a boolean ([‘Bool’] - optional)
- No description.
- SulciRecognition_1_select_Sulci_Recognition: a legal value ([‘Enum’] - optional)
- No description.
- SulciRecognition_1_fix_random_seed: a boolean ([‘Bool’] - optional)
- No description.
- SulciRecognition_1_recognition2000_model: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_1_recognition2000_model_hint: a legal value ([‘Enum’] - optional)
- No description.
- SulciRecognition_1_recognition2000_rate: a float ([‘Float’] - optional)
- No description.
- SulciRecognition_1_recognition2000_stopRate: a float ([‘Float’] - optional)
- No description.
- SulciRecognition_1_recognition2000_niterBelowStopProp: an integer (int or long) ([‘Int’] - optional)
- No description.
- SulciRecognition_1_recognition2000_forbid_unknown_label: a boolean ([‘Bool’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_local_or_markovian: a legal value ([‘Enum’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_global_recognition_labels_translation_map: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_global_recognition_initial_transformation: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_global_recognition_labels_priors: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_global_recognition_model_type: a legal value ([‘Enum’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_global_recognition_model: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_local_recognition_model: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_local_recognition_local_referentials: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_local_recognition_direction_priors: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_local_recognition_angle_priors: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_local_recognition_translation_priors: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_markovian_recognition_model: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_markovian_recognition_segments_relations_model: a file name ([‘File’] - optional)
- No description.
- SulciRecognition_1_CNN_recognition19_model_file: a file name ([‘File’] - optional)
- file (.mdsm) storing neural network parameters
- SulciRecognition_1_CNN_recognition19_param_file: a file name ([‘File’] - optional)
- file (.json) storing the hyperparameters (cutting threshold)
- SulciRecognition_1_CNN_recognition19_rebuild_attributes: a boolean ([‘Bool’] - optional)
- No description.
- SulciRecognition_1_CNN_recognition19_allow_multithreading: a boolean ([‘Bool’] - optional)
- No description.
- SulciRecognition_1_CNN_recognition19_cuda: an integer (int or long) ([‘Int’] - optional)
- device on which to run the training(-1 for cpu, i>=0 for the i-th gpu)
Outputs¶
- t1mri_nobias: a file name ([‘File (filename: input)’] - mandatory)
- No description.
- histo_analysis: a file name ([‘File (filename: input)’] - mandatory)
- No description.
- split_brain: a file name ([‘File (filename: input)’] - mandatory)
- No description.
- left_graph: a file name ([‘File (filename: input)’] - mandatory)
- No description.
- right_graph: a file name ([‘File (filename: input)’] - mandatory)
- No description.
- left_labelled_graph: a file name ([‘File (filename: input)’] - mandatory)
- No description.
- right_labelled_graph: a file name ([‘File (filename: input)’] - mandatory)
- No description.
- Renorm_commissure_coordinates: a file name ([‘File (filename: input)’] - optional)
- No description.
- PrepareSubject_talairach_transformation: a file name ([‘File (filename: input)’] - optional)
- No description.
- PrepareSubject_Normalization_normalized: a file name ([‘File (filename: input)’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeFSL_NormalizeFSL_transformation_matrix: a file name ([‘File (filename: input)’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeSPM_spm_transformation: a file name ([‘File (filename: input)’] - optional)
- No description.
- PrepareSubject_Normalization_NormalizeBaladin_NormalizeBaladin_transformation_matrix: a file name ([‘File (filename: input)’] - optional)
- No description.
- PrepareSubject_Normalization_Normalization_AimsMIRegister_transformation_to_template: a file name ([‘File (filename: input)’] - optional)
- No description.
- PrepareSubject_Normalization_Normalization_AimsMIRegister_transformation_to_ACPC: a file name ([‘File (filename: input)’] - optional)
- No description.
- BiasCorrection_field: a file name ([‘File (filename: input)’] - optional)
- No description.
- BiasCorrection_hfiltered: a file name ([‘File (filename: input)’] - optional)
- No description.
- BiasCorrection_white_ridges: a file name ([‘File (filename: input)’] - optional)
- No description.
- BiasCorrection_variance: a file name ([‘File (filename: input)’] - optional)
- No description.
- BiasCorrection_edges: a file name ([‘File (filename: input)’] - optional)
- No description.
- BiasCorrection_meancurvature: a file name ([‘File (filename: input)’] - optional)
- No description.
- HistoAnalysis_histo: a file name ([‘File (filename: input)’] - optional)
- No description.
- BrainSegmentation_brain_mask: a file name ([‘File (filename: input)’] - optional)
- No description.
- Renorm_skull_stripped: a file name ([‘File (filename: input)’] - optional)
- No description.
- Renorm_transformation: a file name ([‘File (filename: input)’] - optional)
- No description.
- Renorm_talairach_transformation: a file name ([‘File (filename: input)’] - optional)
- No description.
- Renorm_Normalization_reoriented_t1mri: a file name ([‘File (filename: input)’] - optional)
- No description.
- Renorm_Normalization_normalized: a file name ([‘File (filename: input)’] - optional)
- No description.
- Renorm_Normalization_NormalizeFSL_NormalizeFSL_transformation_matrix: a file name ([‘File (filename: input)’] - optional)
- No description.
- Renorm_Normalization_NormalizeSPM_spm_transformation: a file name ([‘File (filename: input)’] - optional)
- No description.
- Renorm_Normalization_NormalizeBaladin_NormalizeBaladin_transformation_matrix: a file name ([‘File (filename: input)’] - optional)
- No description.
- Renorm_Normalization_Normalization_AimsMIRegister_transformation_to_template: a file name ([‘File (filename: input)’] - optional)
- No description.
- Renorm_Normalization_Normalization_AimsMIRegister_transformation_to_ACPC: a file name ([‘File (filename: input)’] - optional)
- No description.
- TalairachTransformation_Talairach_transform: a file name ([‘File (filename: input)’] - optional)
- No description.
- HeadMesh_head_mesh: a file name ([‘File (filename: input)’] - optional)
- No description.
- HeadMesh_head_mask: a file name ([‘File (filename: input)’] - optional)
- No description.
- SulcalMorphometry_sulcal_morpho_measures: a file name ([‘File (filename: input)’] - optional)
- No description.
- GreyWhiteClassification_grey_white: a file name ([‘File (filename: input)’] - optional)
- No description.
- GreyWhiteTopology_hemi_cortex: a file name ([‘File (filename: input)’] - optional)
- No description.
- GreyWhiteMesh_white_mesh: a file name ([‘File (filename: input)’] - optional)
- No description.
- SulciSkeleton_skeleton: a file name ([‘File (filename: input)’] - optional)
- No description.
- SulciSkeleton_roots: a file name ([‘File (filename: input)’] - optional)
- No description.
- PialMesh_pial_mesh: a file name ([‘File (filename: input)’] - optional)
- No description.
- CorticalFoldsGraph_sulci_voronoi: a file name ([‘File (filename: input)’] - optional)
- No description.
- CorticalFoldsGraph_cortex_mid_interface: a file name ([‘File (filename: input)’] - optional)
- No description.
- SulciRecognition_recognition2000_energy_plot_file: a file name ([‘File (filename: input)’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_global_recognition_posterior_probabilities: a file name ([‘File (filename: input)’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_global_recognition_output_transformation: a file name ([‘File (filename: input)’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_global_recognition_output_t1_to_global_transformation: a file name ([‘File (filename: input)’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_local_recognition_posterior_probabilities: a file name ([‘File (filename: input)’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_local_recognition_output_local_transformations: a directory name ([‘Directory (filename: input)’] - optional)
- No description.
- SulciRecognition_SPAM_recognition09_markovian_recognition_posterior_probabilities: a file name ([‘File (filename: input)’] - optional)
- No description.
- GreyWhiteClassification_1_grey_white: a file name ([‘File (filename: input)’] - optional)
- No description.
- GreyWhiteTopology_1_hemi_cortex: a file name ([‘File (filename: input)’] - optional)
- No description.
- GreyWhiteMesh_1_white_mesh: a file name ([‘File (filename: input)’] - optional)
- No description.
- SulciSkeleton_1_skeleton: a file name ([‘File (filename: input)’] - optional)
- No description.
- SulciSkeleton_1_roots: a file name ([‘File (filename: input)’] - optional)
- No description.
- PialMesh_1_pial_mesh: a file name ([‘File (filename: input)’] - optional)
- No description.
- CorticalFoldsGraph_1_sulci_voronoi: a file name ([‘File (filename: input)’] - optional)
- No description.
- CorticalFoldsGraph_1_cortex_mid_interface: a file name ([‘File (filename: input)’] - optional)
- No description.
- SulciRecognition_1_recognition2000_energy_plot_file: a file name ([‘File (filename: input)’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_global_recognition_posterior_probabilities: a file name ([‘File (filename: input)’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_global_recognition_output_transformation: a file name ([‘File (filename: input)’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_global_recognition_output_t1_to_global_transformation: a file name ([‘File (filename: input)’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_local_recognition_posterior_probabilities: a file name ([‘File (filename: input)’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_local_recognition_output_local_transformations: a directory name ([‘Directory (filename: input)’] - optional)
- No description.
- SulciRecognition_1_SPAM_recognition09_markovian_recognition_posterior_probabilities: a file name ([‘File (filename: input)’] - optional)
- No description.
Pipeline schema¶
