.. AUTO-GENERATED FILE -- DO NOT EDIT!

:orphan:

.. currentmodule:: morphologist.capsul.axon.brainsegmentation


.. _morphologist.capsul.axon.brainsegmentation.BrainSegmentation:

morphologist.capsul.axon.brainsegmentation.BrainSegmentation
============================================================

BrainSegmentation
-----------------




.. note::

    * Type 'BrainSegmentation.help()' for a full description of this process parameters.
    * Type '<BrainSegmentation>.get_input_spec()' for a full description of this process input trait types.
    * Type '<BrainSegmentation>.get_output_spec()' for a full description of this process output trait types.


.. _morphologist.capsul.axon.brainsegmentation.BrainSegmentation_inputs:


Inputs
~~~~~~

[Mandatory]

**t1mri_nobias**: a string or os.PathLike object (['File'] - mandatory)
    No description.
**histo_analysis**: a string or os.PathLike object (['File'] - mandatory)
    No description.
**variance**: a string or os.PathLike object (['File'] - mandatory)
    No description.
**edges**: a string or os.PathLike object (['File'] - mandatory)
    No description.
**lesion_mask_mode**: a legal value (['Enum'] - mandatory)
    No description.
**variant**: a legal value (['Enum'] - mandatory)
    No description.
**erosion_size**: a float (['Float'] - mandatory)
    No description.
**visu**: a legal value (['Enum'] - mandatory)
    No description.
**layer**: a legal value (['Enum'] - mandatory)
    No description.
**first_slice**: an integer (['Int'] - mandatory)
    No description.
**last_slice**: an integer (['Int'] - mandatory)
    No description.
**fix_random_seed**: a boolean (['Bool'] - mandatory)
    No description.

[Optional]

**white_ridges**: a string or os.PathLike object (['File'] - optional)
    No description.
**commissure_coordinates**: a string or os.PathLike object (['File'] - optional)
    No description.
**lesion_mask**: a string or os.PathLike object (['File'] - optional)
    No description.

.. _morphologist.capsul.axon.brainsegmentation.BrainSegmentation_outputs:


Outputs
~~~~~~~

**brain_mask**: a string or os.PathLike object (['File (filename: input)'] - mandatory)
    No description.