aimsdata  5.0.5
Neuroimaging data handling
fdfheader.h
Go to the documentation of this file.
1 /* This software and supporting documentation are distributed by
2  * Institut Federatif de Recherche 49
3  * CEA/NeuroSpin, Batiment 145,
4  * 91191 Gif-sur-Yvette cedex
5  * France
6  *
7  * This software is governed by the CeCILL-B license under
8  * French law and abiding by the rules of distribution of free software.
9  * You can use, modify and/or redistribute the software under the
10  * terms of the CeCILL-B license as circulated by CEA, CNRS
11  * and INRIA at the following URL "http://www.cecill.info".
12  *
13  * As a counterpart to the access to the source code and rights to copy,
14  * modify and redistribute granted by the license, users are provided only
15  * with a limited warranty and the software's author, the holder of the
16  * economic rights, and the successive licensors have only limited
17  * liability.
18  *
19  * In this respect, the user's attention is drawn to the risks associated
20  * with loading, using, modifying and/or developing or reproducing the
21  * software by the user in light of its specific status of free software,
22  * that may mean that it is complicated to manipulate, and that also
23  * therefore means that it is reserved for developers and experienced
24  * professionals having in-depth computer knowledge. Users are therefore
25  * encouraged to load and test the software's suitability as regards their
26  * requirements in conditions enabling the security of their systems and/or
27  * data to be ensured and, more generally, to use and operate it in the
28  * same conditions as regards security.
29  *
30  * The fact that you are presently reading this means that you have had
31  * knowledge of the CeCILL-B license and that you accept its terms.
32  */
33 
34 #ifndef AIMS_IO_FDFHEADER_H
35 #define AIMS_IO_FDFHEADER_H
36 
39 #include <aims/def/general.h>
40 #include <string>
41 #include <vector>
42 
43 namespace aims
44 {
46  {
47  public:
48 
49  FdfHeader( const std::string& name, const std::string& type="UNKNOWN",
50  int x=1, int y=1, int z=1, int t=1,
51  float sx=1, float sy=1, float sz=1, float st=1 ) :
52  SliceFormatHeader( name, x, y, z, t, sx, sy, sz ,st ),
53  _type(type), _dimX(x), _dimY(y),
54  _dimZ(z), _dimT(t), _sizeX(sx), _sizeY(sy), _sizeZ(sz), _sizeT(st)
55  { }
56 
57  virtual ~FdfHeader() { }
58 
59  int dimX() const { return _dimX; }
60  int dimY() const { return _dimY; }
61  int dimZ() const { return _dimZ; }
62  int dimT() const { return _dimT; }
63 
64  float sizeX() const { return _sizeX; }
65  float sizeY() const { return _sizeY; }
66  float sizeZ() const { return _sizeZ; }
67  float sizeT() const { return _sizeT; }
68 
70  std::string dataType() const { return _type; }
71  void setType( const std::string & t );
73  std::string name() const { return _name; }
74  std::vector<std::string> possibleDataTypes() const;
75 
76  virtual std::string extension() const { return( ".fdf" ); }
77  virtual std::set<std::string> extensions() const;
78 
79  void read();
80  void readProcPar( std::string name );
81  virtual std::vector<std::string> inputFilenames();
82 
83  protected:
84  virtual std::set<std::string> getFiles(std::string filename) const;
85 
86  private:
87  std::string _type;
88  int _dimX;
89  int _dimY;
90  int _dimZ;
91  int _dimT;
92  float _sizeX;
93  float _sizeY;
94  float _sizeZ;
95  float _sizeT;
96 
97  };
98 
99 
100 }
101 
102 #endif
103 
virtual ~FdfHeader()
Definition: fdfheader.h:57
int dimT() const
Definition: fdfheader.h:62
#define AIMSDATA_API
FdfHeader(const std::string &name, const std::string &type="UNKNOWN", int x=1, int y=1, int z=1, int t=1, float sx=1, float sy=1, float sz=1, float st=1)
Definition: fdfheader.h:49
float sizeY() const
Definition: fdfheader.h:65
The class for EcatSino data write operation.
Definition: border.h:44
virtual std::string extension() const
standard file format extension of specialized headers
Definition: fdfheader.h:76
Header used for 2D image formats.
int dimY() const
Definition: fdfheader.h:60
int dimX() const
Definition: fdfheader.h:59
float sizeZ() const
Definition: fdfheader.h:66
float sizeT() const
Definition: fdfheader.h:67
float sizeX() const
Definition: fdfheader.h:64
std::string name() const
Get the file name of the header.
Definition: fdfheader.h:73
int dimZ() const
Definition: fdfheader.h:61
std::string dataType() const
Get type of items ("U08", "S08", "U16", "S16", ...)
Definition: fdfheader.h:70