classes.h

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/* Copyright (C) 2000-2013 CEA
 *
 * This software and supporting documentation were developed by
 *     bioPICSEL
 *     CEA/DSV/I²BM/MIRCen/LMN, Batiment 61,
 *     18, route du Panorama
 *     92265 Fontenay-aux-Roses
 *     France
 */

#ifndef BRAINRAT_DATA_BVCLASS_H
#define BRAINRAT_DATA_BVCLASS_H

#include <vector>
#include <cartobase/object/object.h>
#include <cartobase/object/property.h>
#include <cartobase/object/pythonreader_d.h>
#include <cartobase/object/pythonwriter_d.h>
#include <brainrat/object/array.h>
#include <brainrat/data/measurevector.h>

// using namespace carto;
// using namespace std;

namespace bio {
      
  class BVclass: public carto::PropertySet
  {
    public:
      BVclass(); 
      BVclass( double prior, std::string name = "" ); 
      BVclass(carto::Array<carto::Array<carto::Array<int> > > h, 
              carto::Array<double> d, double prior = 0.0, std::string name = ""); 
      BVclass( const BVclass & );
      
      virtual ~BVclass()
      {
        //cout << "In BVclass destructor : " << this->name << endl << flush;
        removeProperty( "n" );
        removeProperty( "p" );
        removeProperty( "d" );
        removeProperty( "h" );
      }
//       BVclass &operator =( const BVclass & );
      void printBuiltIns();
      
      std::string name;
      carto::Array<carto::Array<carto::Array<int> > > histo;
      double prior;
      carto::Array<double>  density;
  };  
  
  typedef carto::Array<BVclass> BVclasses;
      
//   // Helpers for classes parsing
//   carto::GenericObject * classesHelper( carto::GenericObject * o, const std::string & n, carto::PythonReader & r );
//   void classesHelper( const GenericObject & obj, PythonWriter & w, int ind, bool writeInternals );
  std::ostream& operator << ( std::ostream& os, const bio::BVclass& thing );
}

namespace carto {
  inline std::ostream& operator << ( std::ostream& os, const carto::Array<bio::BVclass> & thing )
  {
    printVector<bio::BVclass>(os, thing);
    return os;
  }

  DECLARE_GENERIC_OBJECT_TYPE( bio::BVclass )
  DECLARE_GENERIC_OBJECT_TYPE( carto::Array<bio::BVclass> )
  DECLARE_GENERIC_OBJECT_TYPE( carto::Array<bio::BVclass>::interfaced_iterator )
}

#endif