SurfaceBased_StructuralAnalysis Class Reference

#include <cortical_surface/structuralanalysis/minimization.h>

Inheritance diagram for SurfaceBased_StructuralAnalysis:

Collaboration diagram for SurfaceBased_StructuralAnalysis:

Public Member Functions
void	ShortSummaryLabels ()
void	noLabelsZones (int number_of_labels=21)
void	regionLabelsZones ()
void	PrintCliquesNumbers ()
	SurfaceBased_StructuralAnalysis ()
void	setModelParameters (float _ddweight=0.0, float _intrapsweight=0.0, float _simweight=0.0, float _lsweight=0.0, float _ddx1=0.0, float _ddx2=0.0, float _simx1=0.0, float _simx2=0.0, float _lsx1=0.0, float _lsx2=0.0, float _ddh=0.0)
double	getLabelEnergy (int label, int type=UNKNOWN)
double	getClusterEnergy (std::vector< uint > &composante)
double	getTypeEnergy (int type)
double	getTotalEnergy ()
void	SummaryLabels ()
void	StoreToGraph (Graph &primal)
void	StoreSignificanceToGraph (Graph &primal)
void	Initialization (bool initLabels=true)
void	importGraphNodesFromBlobs (std::vector< surf::ScaleSpaceBlob *> &ssblobs)
void	importGraphCliquesFromSSBCliques (std::vector< surf::Clique > &ssbcliques)
void	importGraphNodesAndCliques (std::vector< surf::ScaleSpaceBlob *> &ssblobs, std::vector< surf::Clique > &ssbcliques)

Static Public Member Functions
static void	BuildSites (Graph &primal, std::vector< Site *>)
static void	ConvertSSBlobsToSites (std::vector< surf::ScaleSpaceBlob *> &ssblobs, std::vector< Site *> &sites)
static void	GetSimilarityCliquesFromSSBCliques (std::vector< surf::Clique > &ssbcliques, std::vector< Site *> &sites, std::vector< Clique > &cliques, std::vector< std::vector< int > > &cliquesDuSite)
static std::vector< surf::Clique >	BuildSimilarityCliques (std::vector< surf::ScaleSpaceBlob *> &ssblobs, std::vector< std::vector< surf::GreyLevelBlob *> > &matchingblobs)
static std::vector< surf::Clique >	BuildSimilarityCliques3D (std::vector< surf::ScaleSpaceBlob *> &ssblobs, GroupData &data, float threshold=5.0, int typeDistance=DISTANCE_3DEUCLIDIAN)

Public Attributes
std::vector< uint >	ipscliques
int	globalclique
double	energy
uint	nbsujets
std::vector< int >	labels
std::vector< std::pair< Point2df, Point2df > >	labelsZones
std::vector< std::set< uint > >	zonesListesBlobs
std::vector< std::set< uint > >	listeZones
std::vector< Site * >	sites
std::vector< Clique >	cliques
std::vector< std::vector< int > >	cliquesDuSite
std::string	energyPath
std::string	labelsPath
uint	save

Detailed Description

Definition at line 17 of file minimization.h.

Constructor & Destructor Documentation

SurfaceBased_StructuralAnalysis()

SurfaceBased_StructuralAnalysis::SurfaceBased_StructuralAnalysis ( )

inline

Definition at line 57 of file minimization.h.

References BuildSites(), ConvertSSBlobsToSites(), getClusterEnergy(), getLabelEnergy(), getTotalEnergy(), getTypeEnergy(), Initialization(), setModelParameters(), StoreSignificanceToGraph(), StoreToGraph(), SummaryLabels(), and UNKNOWN.

Member Function Documentation

BuildSimilarityCliques()

static std::vector<surf::Clique> SurfaceBased_StructuralAnalysis::BuildSimilarityCliques ( std::vector< surf::ScaleSpaceBlob *> &  ssblobs, std::vector< std::vector< surf::GreyLevelBlob *> > &  matchingblobs  )

static

Referenced by importGraphNodesFromBlobs().

BuildSimilarityCliques3D()

static std::vector<surf::Clique> SurfaceBased_StructuralAnalysis::BuildSimilarityCliques3D ( std::vector< surf::ScaleSpaceBlob *> &  ssblobs, GroupData &  data, float  threshold = 5.0, int  typeDistance = DISTANCE_3DEUCLIDIAN  )

static

Referenced by importGraphNodesFromBlobs().

BuildSites()

static void SurfaceBased_StructuralAnalysis::BuildSites ( Graph &  primal, std::vector< Site *>    )

static

Referenced by SurfaceBased_StructuralAnalysis().

ConvertSSBlobsToSites()

static void SurfaceBased_StructuralAnalysis::ConvertSSBlobsToSites ( std::vector< surf::ScaleSpaceBlob *> &  ssblobs, std::vector< Site *> &  sites  )

static

Referenced by importGraphNodesAndCliques(), importGraphNodesFromBlobs(), and SurfaceBased_StructuralAnalysis().

getClusterEnergy()

double SurfaceBased_StructuralAnalysis::getClusterEnergy

(

std::vector< uint > &

composante

)

Referenced by SurfaceBased_StructuralAnalysis().

getLabelEnergy()

double SurfaceBased_StructuralAnalysis::getLabelEnergy	(	int	label,
		int	type = UNKNOWN
	)

Referenced by SurfaceBased_StructuralAnalysis().

GetSimilarityCliquesFromSSBCliques()

static void SurfaceBased_StructuralAnalysis::GetSimilarityCliquesFromSSBCliques ( std::vector< surf::Clique > &  ssbcliques, std::vector< Site *> &  sites, std::vector< Clique > &  cliques, std::vector< std::vector< int > > &  cliquesDuSite  )

static

Referenced by importGraphCliquesFromSSBCliques(), importGraphNodesAndCliques(), and importGraphNodesFromBlobs().

getTotalEnergy()

double SurfaceBased_StructuralAnalysis::getTotalEnergy

(

)

Referenced by SurfaceBased_StructuralAnalysis().

getTypeEnergy()

double SurfaceBased_StructuralAnalysis::getTypeEnergy

(

int

type

)

Referenced by SurfaceBased_StructuralAnalysis().

importGraphCliquesFromSSBCliques()

void SurfaceBased_StructuralAnalysis::importGraphCliquesFromSSBCliques ( std::vector< surf::Clique > &  ssbcliques )

inline

Definition at line 103 of file minimization.h.

References GetSimilarityCliquesFromSSBCliques().

importGraphNodesAndCliques()

void SurfaceBased_StructuralAnalysis::importGraphNodesAndCliques ( std::vector< surf::ScaleSpaceBlob *> &  ssblobs, std::vector< surf::Clique > &  ssbcliques  )

inline

Definition at line 107 of file minimization.h.

References BuildDataDrivenCliques(), BuildGlobalClique(), BuildLowerScaleCliques(), BuildMaximalOrderCliques(), ConvertSSBlobsToSites(), GetSimilarityCliquesFromSSBCliques(), GLOBAL, and INTRAPRIMALSKETCH.

importGraphNodesFromBlobs()

void SurfaceBased_StructuralAnalysis::importGraphNodesFromBlobs ( std::vector< surf::ScaleSpaceBlob *> &  ssblobs )

inline

Definition at line 85 of file minimization.h.

References BuildSimilarityCliques(), BuildSimilarityCliques3D(), ConvertSSBlobsToSites(), DISTANCE_3DEUCLIDIAN, and GetSimilarityCliquesFromSSBCliques().

Initialization()

void SurfaceBased_StructuralAnalysis::Initialization

(

bool

initLabels = true

)

Referenced by SurfaceBased_StructuralAnalysis().

noLabelsZones()

void SurfaceBased_StructuralAnalysis::noLabelsZones

(

int

number_of_labels = 21

)

PrintCliquesNumbers()

void SurfaceBased_StructuralAnalysis::PrintCliquesNumbers ( )

inline

Definition at line 40 of file minimization.h.

References BESTLOWERSCALE, DATADRIVEN, INTRAPRIMALSKETCH, and SIMILARITY.

regionLabelsZones()

void SurfaceBased_StructuralAnalysis::regionLabelsZones

(

)

setModelParameters()

void SurfaceBased_StructuralAnalysis::setModelParameters	(	float	_ddweight = 0.0,
		float	_intrapsweight = 0.0,
		float	_simweight = 0.0,
		float	_lsweight = 0.0,
		float	_ddx1 = 0.0,
		float	_ddx2 = 0.0,
		float	_simx1 = 0.0,
		float	_simx2 = 0.0,
		float	_lsx1 = 0.0,
		float	_lsx2 = 0.0,
		float	_ddh = 0.0
	)

Referenced by SurfaceBased_StructuralAnalysis().

ShortSummaryLabels()

void SurfaceBased_StructuralAnalysis::ShortSummaryLabels

(

)

StoreSignificanceToGraph()

void SurfaceBased_StructuralAnalysis::StoreSignificanceToGraph

(

Graph &

primal

)

Referenced by SurfaceBased_StructuralAnalysis().

StoreToGraph()

void SurfaceBased_StructuralAnalysis::StoreToGraph

(

Graph &

primal

)

Referenced by SurfaceBased_StructuralAnalysis().

SummaryLabels()

void SurfaceBased_StructuralAnalysis::SummaryLabels

(

)

Referenced by SurfaceBased_StructuralAnalysis().

Member Data Documentation

cliques

std::vector<Clique> SurfaceBased_StructuralAnalysis::cliques

Definition at line 30 of file minimization.h.

cliquesDuSite

std::vector<std::vector<int> > SurfaceBased_StructuralAnalysis::cliquesDuSite

Definition at line 31 of file minimization.h.

energy

double SurfaceBased_StructuralAnalysis::energy

Definition at line 23 of file minimization.h.

energyPath

std::string SurfaceBased_StructuralAnalysis::energyPath

Definition at line 35 of file minimization.h.

globalclique

int SurfaceBased_StructuralAnalysis::globalclique

Definition at line 21 of file minimization.h.

ipscliques

std::vector<uint> SurfaceBased_StructuralAnalysis::ipscliques

Definition at line 20 of file minimization.h.

labels

std::vector<int> SurfaceBased_StructuralAnalysis::labels

Definition at line 25 of file minimization.h.

labelsPath

std::string SurfaceBased_StructuralAnalysis::labelsPath

Definition at line 35 of file minimization.h.

labelsZones

std::vector<std::pair<Point2df,Point2df> > SurfaceBased_StructuralAnalysis::labelsZones

Definition at line 26 of file minimization.h.

listeZones

std::vector<std::set<uint> > SurfaceBased_StructuralAnalysis::listeZones

Definition at line 28 of file minimization.h.

nbsujets

uint SurfaceBased_StructuralAnalysis::nbsujets

Definition at line 24 of file minimization.h.

save

uint SurfaceBased_StructuralAnalysis::save

Definition at line 36 of file minimization.h.

sites

std::vector<Site *> SurfaceBased_StructuralAnalysis::sites

Definition at line 29 of file minimization.h.

zonesListesBlobs

std::vector<std::set<uint> > SurfaceBased_StructuralAnalysis::zonesListesBlobs

Definition at line 27 of file minimization.h.

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The documentation for this class was generated from the following file:

• cortical_surface/structuralanalysis/minimization.h