aims::SulcusCorticalSnake Class Reference

#include <cortical_surface/surfacereferential/sulcusCorticalSnake.h>

Collaboration diagram for aims::SulcusCorticalSnake:

Public Member Functions
	SulcusCorticalSnake (TimeTexture< float > _constraint, float _value, float _alpha1, float _alpha2, float _alpha3, AimsSurfaceTriangle _mesh)
	~SulcusCorticalSnake ()
void	computeGraphDijkstra (AimsSurfaceTriangle surface, int constraintType, int strain)
void	computeShortestPath (int method, unsigned source, unsigned target)
void	createDistanceTexture ()
TimeTexture< float >	compute_snake ()
void	compute_snake_at_1_resolution ()
int	stop_total ()
int	stop_condition_1_resolution ()
int	define_extremities ()
int	is_it_in_the_vector (uint vertex)
int	are_they_neighbours (uint one, uint two)
uint	define_new_middle_point (uint i, uint j)
void	refine_vector ()
void	compute_curv ()
float	compute_energy (uint index_courant)
void	treat_list_point (uint index, std::map< int, std::map< int, int > > &count)
void	process_list (std::map< int, std::map< int, int > > &count)
float	MeshDistance_adapt (const Texture< float > &inittex, bool allowUnreached, uint ind)
Texture< float >	MeshDistance_adapt_tex (const Texture< float > &inittex, bool allowUnreached, uint ind)
std::map< uint, float >	MeshDistance_adapt_local (const Texture< float > &inittex, uint ind1, uint ind2)

Public Attributes
TimeTexture< float >	constraint_load
float	value
float	alpha1
float	alpha2
float	alpha3
AimsSurfaceTriangle	mesh
uint	n1
uint	n2
uint	size
uint	size_vector
int	add_pts
int	cpt_multi
TimeTexture< float >	curv
float	h_min
float	h_max
float	max
TimeTexture< float >	constraint
TimeTexture< float >	result_total
TimeTexture< float >	tex_distance
std::vector< std::set< uint > >	neigh
std::vector< uint >	list_points
std::vector< uint >	avant_list
std::vector< uint >	cpt_points
std::vector< uint >	ordre_points
std::vector< uint >	new_vector
std::vector< uint >	new_vector_res
std::vector< Point3df >	vert
AimsSurface< 3, Void >	mesh_base
std::vector< AimsVector< uint, 3 > >	poly
int	cpt_resolution
GeodesicPath *	sp

Detailed Description

Definition at line 16 of file sulcusCorticalSnake.h.

Constructor & Destructor Documentation

SulcusCorticalSnake()

aims::SulcusCorticalSnake::SulcusCorticalSnake ( TimeTexture< float >  _constraint, float  _value, float  _alpha1, float  _alpha2, float  _alpha3, AimsSurfaceTriangle  _mesh  )

inline

Definition at line 75 of file sulcusCorticalSnake.h.

References TimeTexture< T >::nItem(), AimsSurface< D, T >::polygon(), TimeTexture< T >::push_back(), size, aims::SurfaceManip::surfaceNeighbours(), and AimsSurface< D, T >::vertex().

~SulcusCorticalSnake()

aims::SulcusCorticalSnake::~SulcusCorticalSnake ( )

inline

Definition at line 113 of file sulcusCorticalSnake.h.

References are_they_neighbours(), compute_curv(), compute_energy(), compute_snake(), compute_snake_at_1_resolution(), computeGraphDijkstra(), computeShortestPath(), createDistanceTexture(), define_extremities(), define_new_middle_point(), TimeTexture< T >::erase(), is_it_in_the_vector(), MeshDistance_adapt(), MeshDistance_adapt_local(), MeshDistance_adapt_tex(), process_list(), refine_vector(), sp, stop_condition_1_resolution(), stop_total(), and treat_list_point().

Member Function Documentation

are_they_neighbours()

int aims::SulcusCorticalSnake::are_they_neighbours	(	uint	one,
		uint	two
	)

Referenced by ~SulcusCorticalSnake().

compute_curv()

void aims::SulcusCorticalSnake::compute_curv

(

)

Referenced by ~SulcusCorticalSnake().

compute_energy()

float aims::SulcusCorticalSnake::compute_energy

(

uint

index_courant

)

Referenced by ~SulcusCorticalSnake().

compute_snake()

TimeTexture<float> aims::SulcusCorticalSnake::compute_snake

(

)

Referenced by ~SulcusCorticalSnake().

compute_snake_at_1_resolution()

void aims::SulcusCorticalSnake::compute_snake_at_1_resolution

(

)

Referenced by ~SulcusCorticalSnake().

computeGraphDijkstra()

void aims::SulcusCorticalSnake::computeGraphDijkstra	(	AimsSurfaceTriangle	surface,
		int	constraintType,
		int	strain
	)

Referenced by ~SulcusCorticalSnake().

computeShortestPath()

void aims::SulcusCorticalSnake::computeShortestPath	(	int	method,
		unsigned	source,
		unsigned	target
	)

Referenced by ~SulcusCorticalSnake().

createDistanceTexture()

void aims::SulcusCorticalSnake::createDistanceTexture

(

)

Referenced by ~SulcusCorticalSnake().

define_extremities()

int aims::SulcusCorticalSnake::define_extremities

(

)

Referenced by ~SulcusCorticalSnake().

define_new_middle_point()

uint aims::SulcusCorticalSnake::define_new_middle_point	(	uint	i,
		uint	j
	)

Referenced by ~SulcusCorticalSnake().

is_it_in_the_vector()

int aims::SulcusCorticalSnake::is_it_in_the_vector

(

uint

vertex

)

Referenced by ~SulcusCorticalSnake().

MeshDistance_adapt()

float aims::SulcusCorticalSnake::MeshDistance_adapt	(	const Texture< float > &	inittex,
		bool	allowUnreached,
		uint	ind
	)

Referenced by ~SulcusCorticalSnake().

MeshDistance_adapt_local()

std::map< uint, float> aims::SulcusCorticalSnake::MeshDistance_adapt_local	(	const Texture< float > &	inittex,
		uint	ind1,
		uint	ind2
	)

Referenced by ~SulcusCorticalSnake().

MeshDistance_adapt_tex()

Texture<float> aims::SulcusCorticalSnake::MeshDistance_adapt_tex	(	const Texture< float > &	inittex,
		bool	allowUnreached,
		uint	ind
	)

Referenced by ~SulcusCorticalSnake().

process_list()

void aims::SulcusCorticalSnake::process_list

(

std::map< int, std::map< int, int > > &

count

)

Referenced by ~SulcusCorticalSnake().

refine_vector()

void aims::SulcusCorticalSnake::refine_vector

(

)

Referenced by ~SulcusCorticalSnake().

stop_condition_1_resolution()

int aims::SulcusCorticalSnake::stop_condition_1_resolution

(

)

Referenced by ~SulcusCorticalSnake().

stop_total()

int aims::SulcusCorticalSnake::stop_total

(

)

Referenced by ~SulcusCorticalSnake().

treat_list_point()

void aims::SulcusCorticalSnake::treat_list_point	(	uint	index,
		std::map< int, std::map< int, int > > &	count
	)

Referenced by ~SulcusCorticalSnake().

Member Data Documentation

add_pts

int aims::SulcusCorticalSnake::add_pts

Definition at line 30 of file sulcusCorticalSnake.h.

alpha1

float aims::SulcusCorticalSnake::alpha1

Definition at line 25 of file sulcusCorticalSnake.h.

alpha2

float aims::SulcusCorticalSnake::alpha2

Definition at line 25 of file sulcusCorticalSnake.h.

alpha3

float aims::SulcusCorticalSnake::alpha3

Definition at line 25 of file sulcusCorticalSnake.h.

avant_list

std::vector<uint> aims::SulcusCorticalSnake::avant_list

Definition at line 49 of file sulcusCorticalSnake.h.

constraint

TimeTexture<float> aims::SulcusCorticalSnake::constraint

Definition at line 38 of file sulcusCorticalSnake.h.

constraint_load

TimeTexture<float> aims::SulcusCorticalSnake::constraint_load

Definition at line 22 of file sulcusCorticalSnake.h.

cpt_multi

int aims::SulcusCorticalSnake::cpt_multi

Definition at line 31 of file sulcusCorticalSnake.h.

cpt_points

std::vector<uint> aims::SulcusCorticalSnake::cpt_points

Definition at line 52 of file sulcusCorticalSnake.h.

cpt_resolution

int aims::SulcusCorticalSnake::cpt_resolution

Definition at line 68 of file sulcusCorticalSnake.h.

curv

TimeTexture<float> aims::SulcusCorticalSnake::curv

Definition at line 32 of file sulcusCorticalSnake.h.

h_max

float aims::SulcusCorticalSnake::h_max

Definition at line 34 of file sulcusCorticalSnake.h.

h_min

float aims::SulcusCorticalSnake::h_min

Definition at line 34 of file sulcusCorticalSnake.h.

list_points

std::vector<uint> aims::SulcusCorticalSnake::list_points

Definition at line 46 of file sulcusCorticalSnake.h.

max

float aims::SulcusCorticalSnake::max

Definition at line 36 of file sulcusCorticalSnake.h.

mesh

AimsSurfaceTriangle aims::SulcusCorticalSnake::mesh

Definition at line 26 of file sulcusCorticalSnake.h.

mesh_base

AimsSurface<3, Void> aims::SulcusCorticalSnake::mesh_base

Definition at line 65 of file sulcusCorticalSnake.h.

n1

uint aims::SulcusCorticalSnake::n1

Definition at line 28 of file sulcusCorticalSnake.h.

n2

uint aims::SulcusCorticalSnake::n2

Definition at line 28 of file sulcusCorticalSnake.h.

neigh

std::vector<std::set<uint> > aims::SulcusCorticalSnake::neigh

Definition at line 43 of file sulcusCorticalSnake.h.

new_vector

std::vector<uint> aims::SulcusCorticalSnake::new_vector

Definition at line 59 of file sulcusCorticalSnake.h.

new_vector_res

std::vector<uint> aims::SulcusCorticalSnake::new_vector_res

Definition at line 62 of file sulcusCorticalSnake.h.

ordre_points

std::vector<uint> aims::SulcusCorticalSnake::ordre_points

Definition at line 56 of file sulcusCorticalSnake.h.

poly

std::vector< AimsVector<uint,3> > aims::SulcusCorticalSnake::poly

Definition at line 66 of file sulcusCorticalSnake.h.

result_total

TimeTexture<float> aims::SulcusCorticalSnake::result_total

Definition at line 39 of file sulcusCorticalSnake.h.

size

uint aims::SulcusCorticalSnake::size

Definition at line 28 of file sulcusCorticalSnake.h.

Referenced by SulcusCorticalSnake().

size_vector

uint aims::SulcusCorticalSnake::size_vector

Definition at line 29 of file sulcusCorticalSnake.h.

sp

GeodesicPath* aims::SulcusCorticalSnake::sp

Definition at line 69 of file sulcusCorticalSnake.h.

Referenced by ~SulcusCorticalSnake().

tex_distance

TimeTexture<float> aims::SulcusCorticalSnake::tex_distance

Definition at line 40 of file sulcusCorticalSnake.h.

value

float aims::SulcusCorticalSnake::value

Definition at line 24 of file sulcusCorticalSnake.h.

vert

std::vector<Point3df> aims::SulcusCorticalSnake::vert

Definition at line 64 of file sulcusCorticalSnake.h.

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The documentation for this class was generated from the following file:

• cortical_surface/surfacereferential/sulcusCorticalSnake.h