aimsalgo  5.1.2
Neuroimaging image processing
filteringfunction_linear.h
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33 
34 
35 #ifndef AIMS_SIGNALFILTER_FILTERINGFUNCTION_LINEAR_H
36 #define AIMS_SIGNALFILTER_FILTERINGFUNCTION_LINEAR_H
37 
38 //--- aims -------------------------------------------------------------------
39 #include <aims/signalfilter/filteringfunction.h> // aims::FilteringFunction
40 //--- cartodata --------------------------------------------------------------
42 //--- std --------------------------------------------------------------------
43 #include <set>
44 #include <string>
45 #include <map>
46 #include <vector>
47 //--- forward declarations ---------------------------------------------------
48 namespace carto {
49  class Object;
50  Object none();
51 }
52 namespace aims {
53  class StructuringElementRef;
54  namespace strel {
55  StructuringElementRef none();
56  }
57 }
58 //----------------------------------------------------------------------------
59 
60 namespace aims {
61 
62  //==========================================================================
63  // LINEAR FILTERING FUNCTON
64  //==========================================================================
69  template <typename T>
71  {
72  public:
74  //----------------------------------------------------------------------
75  // interface
76  //----------------------------------------------------------------------
79  virtual T execute( const carto::VolumeRef<T> & in ) const = 0;
83  virtual const std::vector<int> & getAmplitude() const = 0;
85  virtual LinearFilteringFunction<T> *clone() const = 0;
86 
87  protected:
88  //----------------------------------------------------------------------
89  // magic 3
90  //----------------------------------------------------------------------
94  };
95 
96  //==========================================================================
97  // LINEAR FILTERING FUNCTIONS: FACTORY
98  //==========================================================================
99  template <typename T>
101  {
102  public:
103  static LinearFilteringFunction<T> * create( const std::string & name,
104  carto::Object options = carto::none() );
105  static void registerFunction( const std::string & name,
106  const LinearFilteringFunction<T> & func );
107  static std::set<std::string> names();
108  protected:
109  static void init();
110  static std::map<std::string,carto::rc_ptr<LinearFilteringFunction<T> > > & _map();
111  };
112 
113 } // namespace aims
114 
115 
116 //============================================================================
117 // LINEAR FILTERING FUNCTIONS: DERIVED CLASSES
118 //============================================================================
119 #define AIMS_DECLARE_LINFILTERUNC_CUSTOMIZED( NAME ) \
120  template <typename T> \
121  class NAME: public LinearFilteringFunction<T> \
122  { \
123  public: \
124  NAME( carto::Object options = carto::none() ) \
125  { setOptions( options ); } \
126  NAME( const NAME<T> & other ); \
127  NAME<T> & operator=( const NAME<T> & ); \
128  virtual ~NAME(); \
129  virtual NAME<T> *clone() const { return new NAME<T>(*this); } \
130  virtual void setOptions( const carto::Object & options ); \
131  virtual void updateOptions( const carto::Object & options ); \
132  const std::vector<int> & getAmplitude() const; \
133  virtual T execute( const carto::VolumeRef<T> & in ) const;
134 
135 #define AIMS_DECLARE_LINFILTERFUNC_BASIC( NAME ) \
136  AIMS_DECLARE_LINFILTERUNC_CUSTOMIZED(NAME) \
137  }; \
138  template <typename T> \
139  NAME<T>::NAME( const NAME<T> & other ) {} \
140  template <typename T> \
141  NAME<T>::~NAME() {} \
142  template <typename T> \
143  NAME<T> & NAME<T>::operator=( const NAME<T> & other ) {}
144 
145 
146 namespace aims
147 {
148  AIMS_DECLARE_LINFILTERUNC_CUSTOMIZED(GaborFilterFunc)
149  protected:
150  void setKernel();
151  double _sigma;
152  double _theta;
153  double _lambda;
154  double _psi;
155  double _gamma;
156  bool _real;
157  int _nstd;
158  bool _init;
159  std::vector<int> _amplitude;
160  std::vector<float> _voxelsize;
162  };
163 } // namespace aims
164 
165 #endif
Pure virtual class: interface for filtering functions called by aims::FilteringImageAlgorithm and aim...
static std::map< std::string, carto::rc_ptr< LinearFilteringFunction< T > > > & _map()
static std::set< std::string > names()
static LinearFilteringFunction< T > * create(const std::string &name, carto::Object options=carto::none())
static void registerFunction(const std::string &name, const LinearFilteringFunction< T > &func)
Base class for linear filtering functions.
virtual T execute(const carto::VolumeRef< T > &in) const =0
virtual const std::vector< int > & getAmplitude() const =0
Return a vector fo size 6 describing the border needed in each direction (x-, x+, y-,...
virtual LinearFilteringFunction< T > * clone() const =0
clone
LinearFilteringFunction(const LinearFilteringFunction< T > &)
LinearFilteringFunction< T > & operator=(const LinearFilteringFunction< T > &)
#define AIMS_DECLARE_LINFILTERUNC_CUSTOMIZED(NAME)
StructuringElementRef none()
std::vector< int > _amplitude
void setKernel()
carto::VolumeRef< double > _kernel
std::vector< float > _voxelsize
Object none()