Bundles structure building as a Graph. More...

#include <aims/fibers/bundles.h>

Inheritance diagram for aims::BundleToGraph:

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Collaboration diagram for aims::BundleToGraph:

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Public Member Functions
	BundleToGraph ()

	BundleToGraph (Graph &)

virtual	~BundleToGraph ()

const carto::rc_ptr< Graph > &	getGraph () const

Public Member Functions inherited from aims::BundleListener
virtual	~BundleListener ()

Public Member Functions inherited from carto::PropertySet
	PropertySet ()

	PropertySet (const PropertySet &)

PropertySet &	operator= (const PropertySet &)

virtual	~PropertySet ()

Signal &	getSignalPropertyChanged ()

void	addBuiltinProperty (const std::string &, T &)

void	addBuiltinProperty (const std::string &, T &, bool &provided)

bool	getProperty (const std::string &, T &) const

void	setProperty (const std::string &, const T &)

virtual bool	getProperty (const std::string &, Object &) const

virtual void	setProperty (const std::string &, Object)

virtual bool	removeProperty (const std::string &key)

virtual bool	hasProperty (const std::string &) const

virtual size_t	size () const

virtual void	clearProperties ()

virtual void	copyBuiltinProperties (const PropertySet &source)

virtual Object	objectIterator () const

iterator	getIterator () const

void	changeBuiltinProperty (const std::string &, T &)

void	changeBuiltinProperty (const std::string &, T &, bool &provided)

virtual bool	getProperty (const std::string &key, Object &value) const =0

Object	getProperty (const std::string &) const

Object	getProperty (Object key) const

bool	getProperty (const std::string &key, T &value) const

bool	getProperty (const std::string &key, Object &value) const

Public Member Functions inherited from carto::RCObject
	RCObject ()

	RCObject (const RCObject &)

RCObject &	operator= (const RCObject &)

virtual	~RCObject ()

Public Member Functions inherited from carto::DictionaryInterface
virtual	~DictionaryInterface ()

virtual bool	isDictionary () const

Object	getProperty (const std::string &) const

Object	getProperty (Object key) const

bool	getProperty (const std::string &key, T &value) const

void	setProperty (const std::string &, const char *)

void	setProperty (const std::string &, const T &)

virtual void	copyProperties (Object source)

virtual bool	operator== (const DictionaryInterface &other) const

virtual bool	operator!= (const DictionaryInterface &other) const

void	setProperty (const std::string &key, Object const &value)

bool	getProperty (const std::string &key, Object &value) const

Public Member Functions inherited from carto::SizeInterface
virtual	~SizeInterface ()

Public Member Functions inherited from carto::Interface
virtual	~Interface ()

Public Member Functions inherited from carto::IterableInterface
virtual	~IterableInterface ()

virtual bool	isIterable () const

virtual bool	operator== (const IterableInterface &other) const

virtual bool	operator!= (const IterableInterface &other) const

Protected Member Functions
virtual void	bundleStarted (const BundleProducer &, const BundleInfo &)

virtual void	bundleTerminated (const BundleProducer &, const BundleInfo &)

virtual void	fiberStarted (const BundleProducer &, const BundleInfo &, const FiberInfo &)

virtual void	fiberTerminated (const BundleProducer &, const BundleInfo &, const FiberInfo &)

virtual void	newFiberPoint (const BundleProducer &, const BundleInfo &, const FiberInfo &, const FiberPoint &)

virtual void	noMoreBundle (const BundleProducer &)

virtual void	parametersValueChanged ()

void	parameterChangedSlot (const carto::Object &, const std::string &, const carto::Object &)

void	shuffleBundle ()

Protected Attributes
Graph *	_meshResult

carto::rc_ptr< Graph >	_rcptrMeshResult

float	_minimumLength

float	_width

int	_numPointsInMeshSection

std::vector< Point2df >	_section

std::vector< int >	_boundingbox_min

std::vector< int >	_boundingbox_max

bool	_normalsAsFiberStartPos

Point3df	_relatveFiberStartPos

bool	_autoFiberStartPos

Vertex *	_currentVertex

aims::Polyline	_currentCurve

carto::rc_ptr< AimsSurfaceTriangle >	_currentMesh

carto::rc_ptr< AimsTimeSurface< 2, Void > >	_currentLines

size_t	_current_fibers_count

Additional Inherited Members
Public Types inherited from carto::PropertySet
typedef ::sigc::signal3< void, const Object &, const std::string &, const Object & >	Signal

Public Types inherited from carto::RCObject
typedef int	RefCounterType

Detailed Description

Bundles structure building as a Graph.

The Graph structure is used to represent bundles and fibers when we need to keep their complete structure in memory. This structure is especially used for 3D rendering in Anatomist.

BundleToGraph is a BundleListener, thus has to be connected to a BundleProducer to work (typically, a BundleReader).

Note that the BundleProducer / BundleListener system work as processing chains, and allows to keep only a small set of data in memory at one time. The Graph structure, on the contrary, keeps all information in memory, so may need a large amount of memory.

Definition at line 372 of file bundles.h.

Constructor & Destructor Documentation

◆ BundleToGraph() [1/2]

aims::BundleToGraph::BundleToGraph ( )

◆ BundleToGraph() [2/2]

aims::BundleToGraph::BundleToGraph ( Graph & )

◆ ~BundleToGraph()

virtual aims::BundleToGraph::~BundleToGraph ( )

virtual

Member Function Documentation

◆ bundleStarted()

virtual void aims::BundleToGraph::bundleStarted	(	const BundleProducer &	,
		const BundleInfo &
	)

protectedvirtual

Reimplemented from aims::BundleListener.

◆ bundleTerminated()

virtual void aims::BundleToGraph::bundleTerminated	(	const BundleProducer &	,
		const BundleInfo &
	)

protectedvirtual

Reimplemented from aims::BundleListener.

◆ fiberStarted()

virtual void aims::BundleToGraph::fiberStarted	(	const BundleProducer &	,
		const BundleInfo &	,
		const FiberInfo &
	)

protectedvirtual

Reimplemented from aims::BundleListener.

◆ fiberTerminated()

virtual void aims::BundleToGraph::fiberTerminated	(	const BundleProducer &	,
		const BundleInfo &	,
		const FiberInfo &
	)

protectedvirtual

Reimplemented from aims::BundleListener.

◆ getGraph()

const carto::rc_ptr< Graph > & aims::BundleToGraph::getGraph ( ) const

inline

Definition at line 745 of file bundles.h.

References _rcptrMeshResult.

◆ newFiberPoint()

virtual void aims::BundleToGraph::newFiberPoint	(	const BundleProducer &	,
		const BundleInfo &	,
		const FiberInfo &	,
		const FiberPoint &
	)

protectedvirtual

Reimplemented from aims::BundleListener.

◆ noMoreBundle()

virtual void aims::BundleToGraph::noMoreBundle ( const BundleProducer & )

protectedvirtual

Reimplemented from aims::BundleListener.

Reimplemented in aims::BundleToGraphWriter.

◆ parameterChangedSlot()

void aims::BundleToGraph::parameterChangedSlot	(	const carto::Object &	,
		const std::string &	,
		const carto::Object &
	)

protected

◆ parametersValueChanged()

virtual void aims::BundleToGraph::parametersValueChanged ( )

protectedvirtual

◆ shuffleBundle()

void aims::BundleToGraph::shuffleBundle ( )

protected

Member Data Documentation

◆ _autoFiberStartPos

bool aims::BundleToGraph::_autoFiberStartPos

protected

Definition at line 409 of file bundles.h.

◆ _boundingbox_max

std::vector<int> aims::BundleToGraph::_boundingbox_max

protected

Definition at line 406 of file bundles.h.

◆ _boundingbox_min

std::vector<int> aims::BundleToGraph::_boundingbox_min

protected

Definition at line 405 of file bundles.h.

◆ _current_fibers_count

size_t aims::BundleToGraph::_current_fibers_count

protected

Definition at line 415 of file bundles.h.

◆ _currentCurve

aims::Polyline aims::BundleToGraph::_currentCurve

protected

Definition at line 412 of file bundles.h.

◆ _currentLines

carto::rc_ptr< AimsTimeSurface<2,Void> > aims::BundleToGraph::_currentLines

protected

Definition at line 414 of file bundles.h.

◆ _currentMesh

carto::rc_ptr< AimsSurfaceTriangle > aims::BundleToGraph::_currentMesh

protected

Definition at line 413 of file bundles.h.

◆ _currentVertex

Vertex* aims::BundleToGraph::_currentVertex

protected

Definition at line 411 of file bundles.h.

◆ _meshResult

Graph* aims::BundleToGraph::_meshResult

protected

Definition at line 399 of file bundles.h.

◆ _minimumLength

float aims::BundleToGraph::_minimumLength

protected

Definition at line 401 of file bundles.h.

◆ _normalsAsFiberStartPos

bool aims::BundleToGraph::_normalsAsFiberStartPos

protected

Definition at line 407 of file bundles.h.

◆ _numPointsInMeshSection

int aims::BundleToGraph::_numPointsInMeshSection

protected

Definition at line 403 of file bundles.h.

◆ _rcptrMeshResult

carto::rc_ptr< Graph > aims::BundleToGraph::_rcptrMeshResult

protected

Definition at line 400 of file bundles.h.

Referenced by getGraph().

◆ _relatveFiberStartPos

Point3df aims::BundleToGraph::_relatveFiberStartPos

protected

Definition at line 408 of file bundles.h.

◆ _section

std::vector< Point2df > aims::BundleToGraph::_section

protected

Definition at line 404 of file bundles.h.

◆ _width

float aims::BundleToGraph::_width

protected

Definition at line 402 of file bundles.h.

The documentation for this class was generated from the following file:

aims/fibers/bundles.h

Public Member Functions

Protected Member Functions

Protected Attributes

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ BundleToGraph() [1/2]

◆ BundleToGraph() [2/2]

◆ ~BundleToGraph()

Member Function Documentation

◆ bundleStarted()

◆ bundleTerminated()

◆ fiberStarted()

◆ fiberTerminated()

◆ getGraph()

◆ newFiberPoint()

◆ noMoreBundle()

◆ parameterChangedSlot()

◆ parametersValueChanged()

◆ shuffleBundle()

Member Data Documentation

◆ _autoFiberStartPos

◆ _boundingbox_max

◆ _boundingbox_min

◆ _current_fibers_count

◆ _currentCurve

◆ _currentLines

◆ _currentMesh

◆ _currentVertex

◆ _meshResult

◆ _minimumLength

◆ _normalsAsFiberStartPos

◆ _numPointsInMeshSection

◆ _rcptrMeshResult

◆ _relatveFiberStartPos

◆ _section

◆ _width