roi_diff.h

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/* This software and supporting documentation are distributed by
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#ifndef AIMS_ROI_ROI_DIFF_H
#define AIMS_ROI_ROI_DIFF_H
 
#include <graph/graph/graph.h>
#include <aims/bucket/bucket.h>
#include <cartodata/volume/volume.h>
 
namespace aims
{
 
  class RoiDiff
  {
  public:
    struct DiffStat
    {
      DiffStat()
        : matching_voxels( 0 ), unmatching_voxels( 0 ),
          //to_unknown( 0 ), from_unknown( 0 ),
          dice( 0. )
        {}
 
      unsigned matching_voxels;
      unsigned unmatching_voxels;
  //     unsigned to_unknown;
  //     unsigned from_unknown;
      double dice;
      BucketMap<Void> g2_bucket;
    };
 
    RoiDiff();
    ~RoiDiff();
 
    void diff( const Graph & g1, const Graph & g2 );
    void writeCSV( const std::string & name );
    void writeCSV( std::ostream & s );
 
    const std::map<std::string, DiffStat> & statsByLabel() const;
    const DiffStat & globalStats() const;
    carto::rc_ptr<BucketMap<Void> > mismatch_bucket() const;
    carto::rc_ptr<carto::Volume<int16_t> > graph2LabelVolume() const;
    const std::vector<std::string> & roiNames() const;
    const std::map<std::string, int> & roiNamesInv() const;
 
  private:
    struct Private;
    Private *d;
  };
 
}
 
#endif