ROI

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Inheritance graph

Defined in file : brainvisa/types/builtin.py

Used in the following processes

[Reference Segmentation] Convert and merge
Anatomist Show ROI
Datscan intracranial labels
GraphMergeLabels
GreyLevelConversionToActivity
Quality control DaTscan
Quantification
Resample ROI graph
ROI drawing
ROIGraphMeshRendering
Simple ROI Editor
Thalamus and white matter to PET native space

Associated formats

Aperio svs
DICOM image
Directory
ECAT i image
ECAT v image
FDF image
FreesurferMGH
FreesurferMGZ
GIS image
Graph and data
gz compressed ECAT i image
gz compressed ECAT v image
gz compressed GIS image
gz compressed MINC image
gz compressed NIFTI-1 image
gz compressed SPM image
Hamamatsu ndpi
Hamamatsu vms
Hamamatsu vmu
JPEG image
Leica scn
MINC image
NIFTI-1 image
Sakura svslide
SPM image
TIFF image
TIFF(.tif) image
Ventana bif
Z compressed ECAT i image
Z compressed ECAT v image
Z compressed GIS image
Z compressed SPM image
Zeiss czi

Associated ontology rules

Key attributes

  • brainvisa-3.0 :
    • protocol ,  subject ,  acquisition
  • brainvisa-3.2.0 :
    • template_name ,  center ,  subject ,  processing ,  acquisition ,  tracer ,  analysis ,  PVC_method ,  PVC_ROI ,  ROI_name ,  space ,  tracking_session ,  research_group ,  subject_age