connMatrix.h File Reference

#include <constellation/bundleSet.h>
#include <constellation/tildefs.h>
#include <constellation/connectivities.h>
#include <aims/mesh/surface.h>
#include <aims/mesh/texture.h>

Include dependency graph for connMatrix.h:

Go to the source code of this file.

Namespaces
namespace	aims
namespace	constel

Functions
Connectivities *	constel::weightedConnMatrix (const WeightedFibers &fibers, const AimsSurfaceTriangle &inAimsMesh, Motion motion, bool verbose=false)
Connectivities *	constel::connMatrix (const Fibers &fibers, const AimsSurfaceTriangle &inAimsMesh, float distthresh, float wthresh, Motion motion, bool verbose=false)
Connectivity *	constel::connMatrixSumRows (Connectivities *matrix_ptr, bool verbose=false)
std::vector< double > *	constel::connMatrixSumRows (const aims::SparseOrDenseMatrix &matrix, bool verbose=false)
Connectivities *	constel::connMatrixTargetsRegroup (Connectivities *connMatrixToAllMesh, const TimeTexture< short > &targetRegionsTexture, int targetRegionsNb, bool verbose=false)
Connectivities *	constel::connMatrixReducedFromRegion (Connectivities *allMeshConnMatrix, const TimeTexture< short > &seedRegionsTexture, int seedRegionLabel, int seedRegionLabelVertexNb, std::vector< std::size_t > **seedVertexIndex=0, bool verbose=false)
Connectivities *	constel::connMatrixRegionExtractTargetsRegroup (Connectivities *allMeshConnMatrix, const TimeTexture< short > &seedRegionsTexture, int seedRegionLabel, const TimeTexture< short > &targetRegionsTexture, int targetRegionsNb, std::size_t seedRegionLabelVertexNb, std::vector< std::size_t > **seedVertexIndex, bool verbose=false)
void	constel::writeAimsFmtConnMatrix (Connectivities *connMatrix_ptr, std::string file_name, bool verbose=false)
void	constel::connMatrixNormalize (aims::SparseOrDenseMatrix &connMatrix, bool verbose=false)
Connectivities *	constel::connMatrixRegionExtract (const aims::SparseOrDenseMatrix &allMeshConnMatrix, const TimeTexture< short > &seedRegionsTexture, int seedRegionLabel, std::size_t seedRegionLabelVertexNb, std::vector< std::size_t > **seedVertexIndex=0, bool verbose=false)
TimeTexture< float >	constel::densityTexture (Connectivities *allMeshConnMatrix, std::vector< std::size_t > VertexIndex, bool verbose=false)
TimeTexture< float >	constel::densityTexture (const aims::SparseOrDenseMatrix &allMeshConnMatrix, std::vector< std::size_t > VertexIndex, bool verbose=false)
TimeTexture< float >	constel::meshDensityTexture (Connectivities *connMatrixToAllMesh_ptr, bool verbose=false)
TimeTexture< float >	constel::meshDensityTexture (const aims::SparseOrDenseMatrix &connMatrixToAllMesh, bool verbose=false)
TimeTexture< float > *	constel::oneTargetDensityTargetsRegroupTexture (const Connectivity *lineMatrixToTargetRegions_ptr, const TimeTexture< short > &targetRegionsTex, int timestep)
TimeTexture< float > *	constel::oneTargetDensityTargetsRegroupTexture (const std::vector< double > *lineMatrixToTargetRegions_ptr, const TimeTexture< short > &targetRegionsTex, int timestep)
TimeTexture< float > *	constel::connMatrixRow_TO_TimeTexture_FLOAT (Connectivity *conn_ptr)
Connectivity *	constel::connMatrixToRois (const Fibers &fibers, const AimsSurfaceTriangle &inAimsMesh, float distthresh, float wthresh, Motion motion, bool verbose=false)
Connectivities *	constel::connMatrixSeedMeshToTargetMesh (const Fibers &fibers, const AimsSurfaceTriangle &aimsMesh1, const AimsSurfaceTriangle &aimsMesh2, float distthresh, float wthresh, Motion motion, bool verbose=false)
Connectivities *	constel::connMatrixSeedMesh_to_targetMeshTargets_regroup (const aims::SparseOrDenseMatrix &connMatrixToAllMesh, const TimeTexture< short > &targetRegionsTex, int targetRegionsNb, bool verbose=false)
Connectivities *	constel::connMatrixSeedMeshRegions_to_targetMeshTargets_regroup (Connectivities *connMatrixSeedMeshToTargetMesh_ptr, const TimeTexture< short > &seedRegionsTexture, const TimeTexture< short > &targetRegionsTex, int targetRegionsNb, int seedRegionsNb, bool verbose=false)
aims::SparseOrDenseMatrix *	constel::connectivitiesToSparseOrDenseMatrix (const Connectivities &)