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aimsalgo 6.0.0
Neuroimaging image processing
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#include <aims/math/ppca.h>
Public Member Functions | |
| ProbabilisticPca (const carto::rc_ptr< carto::Volume< T > > &data, const std::vector< std::list< Point3d > > &classes, int nbOfSignificantEigenValues, const std::vector< double > &PIj=std::vector< double >()) | |
| ~ProbabilisticPca () | |
| std::vector< double > | posteriorProbabilities (const carto::rc_ptr< carto::Volume< double > > &x, double px, std::vector< double > &maxProbaByClass) |
| std::vector< double > | andersonScores (const carto::rc_ptr< carto::Volume< double > > &x, double px, std::vector< double > &maxProbaByClass) |
| int | affectedTo (const carto::rc_ptr< carto::Volume< double > > &x) |
| bool | classification (const carto::rc_ptr< carto::Volume< T > > &dynamicImage, const carto::rc_ptr< carto::Volume< byte > > &mask, carto::rc_ptr< carto::Volume< short > > &segmented) |
| bool | fuzzyClassification (const carto::rc_ptr< carto::Volume< T > > &dynamicImage, const carto::rc_ptr< carto::Volume< byte > > &mask, carto::rc_ptr< carto::Volume< float > > &fuzzySegmented, double thresholdOnMaxPercentage=0., double andersonScoreThreshold=0.2, const carto::rc_ptr< carto::Volume< double > > &indivPriorProbabilities=carto::VolumeRef< double >()) |
| float | posteriorProbability (const carto::rc_ptr< carto::Volume< double > > &x, float pX, unsigned int classNb) |
| double | pX (const carto::rc_ptr< carto::Volume< double > > &x) |
| short | nbOfClasses () const |
| aims::ProbabilisticPca< T >::ProbabilisticPca | ( | const carto::rc_ptr< carto::Volume< T > > & | data, |
| const std::vector< std::list< Point3d > > & | classes, | ||
| int | nbOfSignificantEigenValues, | ||
| const std::vector< double > & | PIj = std::vector<double>() ) |
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inline |
| int aims::ProbabilisticPca< T >::affectedTo | ( | const carto::rc_ptr< carto::Volume< double > > & | x | ) |
Definition at line 580 of file ppca_d.h.
References affectedTo().
Referenced by affectedTo(), and classification().
| std::vector< double > aims::ProbabilisticPca< T >::andersonScores | ( | const carto::rc_ptr< carto::Volume< double > > & | x, |
| double | px, | ||
| std::vector< double > & | maxProbaByClass ) |
Definition at line 521 of file ppca_d.h.
References andersonScores().
Referenced by andersonScores(), and fuzzyClassification().
| bool aims::ProbabilisticPca< T >::classification | ( | const carto::rc_ptr< carto::Volume< T > > & | dynamicImage, |
| const carto::rc_ptr< carto::Volume< byte > > & | mask, | ||
| carto::rc_ptr< carto::Volume< short > > & | segmented ) |
Definition at line 603 of file ppca_d.h.
References affectedTo(), carto::VolumeRef< typename T >::at(), classification(), and aims::mask().
Referenced by classification().
| bool aims::ProbabilisticPca< T >::fuzzyClassification | ( | const carto::rc_ptr< carto::Volume< T > > & | dynamicImage, |
| const carto::rc_ptr< carto::Volume< byte > > & | mask, | ||
| carto::rc_ptr< carto::Volume< float > > & | fuzzySegmented, | ||
| double | thresholdOnMaxPercentage = 0., | ||
| double | andersonScoreThreshold = 0.2, | ||
| const carto::rc_ptr< carto::Volume< double > > & | indivPriorProbabilities = carto::VolumeRef<double>() ) |
Definition at line 644 of file ppca_d.h.
References andersonScores(), carto::VolumeRef< typename T >::at(), fuzzyClassification(), and aims::mask().
Referenced by fuzzyClassification().
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inline |
| std::vector< double > aims::ProbabilisticPca< T >::posteriorProbabilities | ( | const carto::rc_ptr< carto::Volume< double > > & | x, |
| double | px, | ||
| std::vector< double > & | maxProbaByClass ) |
Definition at line 553 of file ppca_d.h.
References posteriorProbabilities().
Referenced by posteriorProbabilities().
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inline |
| double aims::ProbabilisticPca< T >::pX | ( | const carto::rc_ptr< carto::Volume< double > > & | x | ) |
Definition at line 754 of file ppca_d.h.
References posteriorProbability(), and pX().
Referenced by posteriorProbability(), and pX().