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QtFormatsReader< T > & | operator>> (QtFormatsReader< T > &reader, AimsData< T > &thing) |
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QtFormatsWriter< T > & | operator<< (QtFormatsWriter< T > &writer, const AimsData< T > &thing) |
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bool | initQtPlugins () |
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QCoreApplication * | initializeQApplication (int argc, char **argv, bool use_gui=true) |
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bool | qtResolveSymlinks () |
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void | setQtResolveSymlinks (bool) |
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void | AimsConnectedComponent (carto::VolumeRef< T > data, aims::Connectivity::Type connectivity, std::map< T, size_t > &valids, const T &backgrnd=0, bool bin=true, size_t minSize=0, size_t maxSize=0, size_t numMax=0, bool verbose=true) |
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void | AimsConnectedComponent (carto::VolumeRef< T > data, aims::Connectivity::Type connectivity, const T &backgrnd=0, bool bin=true, size_t minSize=0, size_t maxSize=0, size_t numMax=0, bool verbose=true) |
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void | AimsConnectedComponent (BucketMap< T > &data, aims::Connectivity::Type connectivity, const T &backgrnd=0, bool bin=true, size_t minSize=0, size_t maxSize=0, size_t numMax=0, bool verbose=true) |
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void | AimsConnectedComponent (AimsBucket< Void > &component, const carto::VolumeRef< T > &data, aims::Connectivity::Type connectivity, const T &backgrnd=0, bool bin=true, size_t minsize=0, size_t maxSize=0, size_t maxcomp=0, bool verbose=true) |
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void | AimsConnectedComponent (AimsBucket< Void > &component, const BucketMap< T > &data, Connectivity::Type connectivity, const T &backgrnd=0, bool bin=true, size_t minsize=0, size_t maxSize=0, size_t maxcomp=0, bool verbose=true) |
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carto::VolumeRef< int16_t > | AimsLabeledConnectedComponent (AimsBucket< Void > &component, const carto::VolumeRef< T > &data, aims::Connectivity::Type connectivity, const T &backgrnd=0, bool bin=true, size_t minsize=0, size_t maxSize=0, size_t maxcomp=0, bool verbose=true) |
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AimsData< T > | transpose (const AimsData< T > &thing) |
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void | incSorting (AimsData< T > &thing) |
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void | decSorting (AimsData< T > &thing) |
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AimsData< int32_t > | incOrder (const AimsData< T > &thing) |
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AimsData< int32_t > | decOrder (const AimsData< T > &thing) |
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bool | hasSameDim (const AimsData< T > &v1, const AimsData< T > &v2) |
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bool | hasSameSize (const AimsData< T > &v1, const AimsData< T > &v2) |
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AimsData< T > | triInf (const AimsData< T > &thing) |
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AimsData< T > | triSup (const AimsData< T > &thing) |
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std::string | aimsVersion () |
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AIMSDATA_API T | byteswap (const T &x) |
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AIMSDATA_API T | byteswap16 (const T &x) |
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AIMSDATA_API T | byteswap32 (const T &x) |
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AIMSDATA_API T | byteswap64 (const T &x) |
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AIMSDATA_API short | byteswap (const short &x) |
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AIMSDATA_API unsigned short | byteswap (const unsigned short &x) |
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AIMSDATA_API int | byteswap (const int &x) |
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AIMSDATA_API unsigned int | byteswap (unsigned int x) |
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AIMSDATA_API float | byteswap (const float &x) |
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GenesisReader< T > & | operator>> (GenesisReader< T > &reader, AimsData< T > &thing) |
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AIMSDATA_API HierarchyReader & | operator>> (HierarchyReader &, Tree &) |
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HierarchyReader & | operator>> (HierarchyReader &reader, Hierarchy &thing) |
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MotionWriter & | operator<< (MotionWriter &writer, const AffineTransformation3d &thing) __attribute__((__deprecated__("OBSOLETE"))) |
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AIMSDATA_API PovWriter< D, T > & | operator<< (PovWriter< D, T > &writer, const AimsTimeSurface< D, T > &thing) |
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bool | canEncodeAsScaledS16 (const carto::Volume< T > &vol, float &slope, float &offset, bool enableoffset=true, double *maxerr=0) |
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bool | canEncodeAsScaledS16 (const carto::Volume< float > &vol, float &slope, float &offset, bool enableoffset, double *) |
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bool | canEncodeAsScaledS16 (const carto::Volume< double > &vol, float &slope, float &offset, bool enableoffset, double *) |
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SpmReader< T > & | operator>> (SpmReader< T > &reader, AimsData< T > &thing) |
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SpmWriter< T > & | operator<< (SpmWriter< T > &writer, const AimsData< T > &thing) |
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void | spmAttributesConverter (carto::Object header) |
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void | spmAttributesConverter (carto::GenericObject &header) |
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aims::GenericWriter & | operator<< (aims::GenericWriter &writer, const T &thing) |
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aims::Writer< T > & | operator<< (aims::Writer< T > &writer, const T &thing) |
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bool | write (const T &obj, const std::string &filename, carto::Object options=carto::none(), const std::string *format=0) |
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AIMSDATA_API MeshReader< D, T > & | operator>> (MeshReader< D, T > &reader, AimsTimeSurface< D, T > &thing) |
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AIMSDATA_API MeshWriter< D, T > & | operator<< (MeshWriter< D, T > &writer, const AimsTimeSurface< D, T > &thing) |
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TriReader & | operator>> (TriReader &reader, AimsSurfaceTriangle &thing) |
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TriWriter & | operator<< (TriWriter &writer, AimsSurfaceTriangle &thing) |
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AIMSDATA_API TexReader< T > & | operator>> (TexReader< T > &r, TimeTexture< T > &thing) |
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AIMSDATA_API ItemWriter< T > & | operator>> (ItemWriter< T > &w, TimeTexture< T > &thing) |
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WavefrontMeshWriter< D, T > & | operator<< (WavefrontMeshWriter< D, T > &writer, const AimsTimeSurface< D, T > &thing) |
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WavefrontMeshReader< D, T > & | operator>> (WavefrontMeshReader< D, T > &reader, AimsTimeSurface< D, T > &thing) |
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int | textureMax (const TimeTexture< short > &intex) |
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int | textureMin (const TimeTexture< short > &intex) |
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std::map< short, size_t > * | labelsHistogram (const TimeTexture< short > &intex, int maxlabel=32767, int minlabel=-32768, bool verbose=false) |
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carto::VolumeRef< AimsRGBA > | giftiColormap (const carto::Object header) |
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carto::VolumeRef< AimsRGBA > | giftiColormap (const TimeTexture< T > &texture) |
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BucketMap< Void > * | mask (const BucketMap< Void > &src, const BucketMap< Void > &m, bool intersect=true) |
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BucketMap< Void > * | maskWithVolume (const BucketMap< Void > &src, const carto::rc_ptr< carto::Volume< T > > m, const T &val=0, bool insideval=false) |
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carto::rc_ptr< Interpolator > | getLinearInterpolator (const std::string &) |
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carto::rc_ptr< Interpolator > | getLinearInterpolator (const carto::rc_ptr< carto::Volume< T > > &) |
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template carto::rc_ptr< Interpolator > | getLinearInterpolator (const carto::rc_ptr< carto::Volume< uint8_t > > &) |
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template carto::rc_ptr< Interpolator > | getLinearInterpolator (const carto::rc_ptr< carto::Volume< int8_t > > &) |
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template carto::rc_ptr< Interpolator > | getLinearInterpolator (const carto::rc_ptr< carto::Volume< uint16_t > > &) |
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template carto::rc_ptr< Interpolator > | getLinearInterpolator (const carto::rc_ptr< carto::Volume< int16_t > > &) |
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template carto::rc_ptr< Interpolator > | getLinearInterpolator (const carto::rc_ptr< carto::Volume< short > > &) |
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template carto::rc_ptr< Interpolator > | getLinearInterpolator (const carto::rc_ptr< carto::Volume< uint32_t > > &) |
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template carto::rc_ptr< Interpolator > | getLinearInterpolator (const carto::rc_ptr< carto::Volume< int32_t > > &) |
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template carto::rc_ptr< Interpolator > | getLinearInterpolator (const carto::rc_ptr< carto::Volume< float > > &) |
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template carto::rc_ptr< Interpolator > | getLinearInterpolator (const carto::rc_ptr< carto::Volume< double > > &) |
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Quaternion | operator* (const Quaternion &a, const Quaternion &b) |
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void | floodFill (carto::Volume< T > &vol, const Point3d &pos, T value, Connectivity::Type connectivity=Connectivity::CONNECTIVITY_18_XYZ, T tolerence=0, bool verbose=false) |
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carto::rc_ptr< MaskIterator > | getMaskIterator (const std::string &fileName) |
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carto::rc_ptr< MaskIterator > | getMaskIterator (const std::string &fileName, carto::rc_ptr< VoxelSampler > voxelSampler) |
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carto::rc_ptr< MaskIterator > | getMaskIterator (const carto::rc_ptr< carto::Volume< T > > &data) |
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carto::rc_ptr< MaskIterator > | getMaskIterator (const carto::VolumeRef< T > &data) |
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carto::rc_ptr< MaskIterator > | getMaskIterator (const carto::VolumeRef< T > &data, carto::rc_ptr< VoxelSampler > voxelSampler) |
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carto::rc_ptr< MaskIterator > | getMaskIterator (const carto::rc_ptr< carto::Volume< T > > &data, carto::rc_ptr< VoxelSampler > voxelSampler) |
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carto::rc_ptr< MaskIterator > | getMaskIterator (const std::string &fileName, const AffineTransformation3d &motion) |
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carto::rc_ptr< MaskIterator > | getMaskIterator (const std::string &fileName, carto::rc_ptr< VoxelSampler > voxelSampler, const AffineTransformation3d &motion) |
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carto::rc_ptr< MaskIterator > | getMaskIterator (const carto::VolumeRef< T > &data, const AffineTransformation3d &motion) |
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carto::rc_ptr< MaskIterator > | getMaskIterator (const carto::rc_ptr< carto::Volume< T > > &data, const AffineTransformation3d &motion) |
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carto::rc_ptr< MaskIterator > | getMaskIterator (const carto::VolumeRef< T > &data, carto::rc_ptr< VoxelSampler > voxelSampler, const AffineTransformation3d &motion) |
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carto::rc_ptr< MaskIterator > | getMaskIterator (const carto::rc_ptr< carto::Volume< T > > &data, carto::rc_ptr< VoxelSampler > voxelSampler, const AffineTransformation3d &motion) |
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carto::rc_ptr< RoiIterator > | getRoiIterator (const std::string &fileName, carto::rc_ptr< VoxelSampler > voxelSampler=carto::rc_ptr< VoxelSampler >()) |
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carto::rc_ptr< RoiIterator > | getRoiIterator (const carto::VolumeRef< T > &data, carto::rc_ptr< VoxelSampler > voxelSampler=carto::rc_ptr< VoxelSampler >()) |
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carto::rc_ptr< RoiIterator > | getRoiIterator (const carto::rc_ptr< carto::Volume< T > > &data, carto::rc_ptr< VoxelSampler > voxelSampler=carto::rc_ptr< VoxelSampler >()) |
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carto::rc_ptr< RoiIterator > | getRoiIterator (const Graph &data, carto::rc_ptr< VoxelSampler > voxelSampler=carto::rc_ptr< VoxelSampler >()) |
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carto::rc_ptr< RoiIterator > | getRoiIterator (const std::string &fileName, const AffineTransformation3d &) |
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carto::rc_ptr< RoiIterator > | getRoiIterator (const std::string &fileName, carto::rc_ptr< VoxelSampler > voxelSampler, const AffineTransformation3d &) |
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carto::rc_ptr< RoiIterator > | getRoiIterator (const carto::VolumeRef< T > &data, const AffineTransformation3d &motion) |
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carto::rc_ptr< RoiIterator > | getRoiIterator (const carto::rc_ptr< carto::Volume< T > > &data, const AffineTransformation3d &motion) |
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carto::rc_ptr< RoiIterator > | getRoiIterator (const Graph &data, const AffineTransformation3d &motion) |
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carto::rc_ptr< RoiIterator > | getRoiIterator (const carto::VolumeRef< T > &data, carto::rc_ptr< VoxelSampler > voxelSampler, const AffineTransformation3d &motion) |
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carto::rc_ptr< RoiIterator > | getRoiIterator (const carto::rc_ptr< carto::Volume< T > > &data, carto::rc_ptr< VoxelSampler > voxelSampler, const AffineTransformation3d &motion) |
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carto::rc_ptr< RoiIterator > | getRoiIterator (const Graph &data, carto::rc_ptr< VoxelSampler > voxelSampler, const AffineTransformation3d &motion) |
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aims::SparseMatrix | operator+ (const aims::SparseMatrix &thing) |
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aims::SparseMatrix | operator- (const aims::SparseMatrix &thing) |
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aims::SparseMatrix | operator+ (const aims::SparseMatrix &thing1, const aims::SparseMatrix &thing2) |
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aims::SparseMatrix | operator- (const aims::SparseMatrix &thing1, const aims::SparseMatrix &thing2) |
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aims::SparseMatrix | operator* (const aims::SparseMatrix &thing1, const aims::SparseMatrix &thing2) |
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std::vector< double > | operator* (const aims::SparseMatrix &thing1, const std::vector< double > &thing2) |
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aims::SparseMatrix | operator* (const aims::SparseMatrix &thing1, const double &thing2) |
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aims::SparseMatrix | operator/ (const aims::SparseMatrix &thing1, const double &thing2) |
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aims::SparseOrDenseMatrix | operator- (const aims::SparseOrDenseMatrix &thing) |
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aims::SparseOrDenseMatrix | operator+ (const aims::SparseOrDenseMatrix &thing1, const aims::SparseOrDenseMatrix &thing2) |
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aims::SparseOrDenseMatrix | operator- (const aims::SparseOrDenseMatrix &thing1, const aims::SparseOrDenseMatrix &thing2) |
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aims::SparseOrDenseMatrix | operator* (const aims::SparseOrDenseMatrix &thing1, const double &thing2) |
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aims::SparseOrDenseMatrix | operator/ (const aims::SparseOrDenseMatrix &thing1, const double &thing2) |
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void | transformBoundingBox (const AffineTransformation3d &AffineTransformation3d, const Point3df &pmin1, const Point3df &pmax1, Point3df &pmin2, Point3df &pmax2) |
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AffineTransformation3d | operator* (const AffineTransformation3d &affineTransformation3d1, const AffineTransformation3d &affineTransformation3d2) |
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carto::rc_ptr< soma::Transformation3d > | operator* (const carto::rc_ptr< soma::Transformation3d > &transformation3d1, const carto::rc_ptr< soma::Transformation3d > &transformation3d2) |
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TIterator | cyclic_advance (TIterator i, TContainer &c) |
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void | minmax (const ObjectType &, ValueType &min, ValueType &max) |
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void | minmax (const carto::Volume< ValueType > &volume, ValueType &min, ValueType &max) |
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void | minmax (const carto::rc_ptr< carto::Volume< ValueType > > &volume, ValueType &min, ValueType &max) |
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void | minmax (const carto::VolumeRef< ValueType > &volume, ValueType &min, ValueType &max) |
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std::ostream & | operator<< (std::ostream &out, aims::ProgressInfo< T1, T2 > &progression) |
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void | toMap (const Vector &vector, std::map< IndexType, typename Vector::value_type > &map, const typename Vector::value_type &background=Vector::value_type(0)) |
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EcatReader< T > & | operator>> (EcatReader< T > &reader, AimsData< T > &thing) |
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EcatSinoReader< T > & | operator>> (EcatSinoReader< T > &reader, std::vector< Sinogram< T > > &thing) |
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EcatSinoWriter< T > & | operator<< (EcatSinoWriter< T > &writer, Sinogram< T > &thing) |
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EcatSinoWriter< T > & | operator<< (EcatSinoWriter< T > &writer, const std::vector< Sinogram< T > > &thing) |
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EcatWriter & | operator<< (EcatWriter &writer, const AimsData< short > &thing) |
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EcatWriter & | operator<< (EcatWriter &writer, const AimsData< float > &thing) |
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VidaReader< T > & | operator>> (VidaReader< T > &reader, AimsData< T > &thing) |
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VidaWriter & | operator<< (VidaWriter &writer, const AimsData< short > &thing) |
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VidaWriter & | operator<< (VidaWriter &writer, const AimsData< float > &thing) |
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PlyReader< D, T > & | operator>> (PlyReader< D, T > &reader, AimsTimeSurface< D, T > &thing) |
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PlyWriter< D, T > & | operator<< (PlyWriter< D, T > &writer, const AimsTimeSurface< D, T > &thing) |
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AIMSDATA_API FdfReader< T > & | operator>> (FdfReader< T > &, AimsData< T > &) |
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JpegReader< T > & | operator>> (JpegReader< T > &reader, AimsData< T > &thing) |
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JpegWriter< T > & | operator<< (JpegWriter< T > &writer, const AimsData< T > &thing) |
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TiffReader< T > & | operator>> (TiffReader< T > &reader, AimsData< T > &thing) |
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TiffWriter< T > & | operator<< (TiffWriter< T > &writer, const AimsData< T > &thing) |
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U | convertedNiftiValue (void *data, int index, int dtype) |
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U | convertedNiftiArrayValue (void *data, int index, int dtype, size_t size) |
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std::string | niftiDataType (int dt) |
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int | niftiIntDataType (const std::string &typecode) |
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std::string | giftiTextureDataType (int dtype, int &ndim, int *dims, int intent, int &ntime) |
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AIMSDATA_API REAL | AimsLagrangeInterpolation (const std::vector< REAL > &xa, const std::vector< REAL > &ya, REAL x, REAL *dy) |
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T | sqr (const T &x) |
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T | cub (const T &x) |
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float | sgn (const T &x) |
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T | absdiff (const T &x, const T &y) |
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AimsRGB | absdiff (const AimsRGB &x, const AimsRGB &y) |
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AimsRGBA | absdiff (const AimsRGBA &x, const AimsRGBA &y) |
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