Volume manipulation

Loading and viewing a Volume with anatomist

Out:

object and window are not deletable since there is a reference on it. Execute 'del win' and 'del avol' to delete them.

from __future__ import print_function

from __future__ import absolute_import
import anatomist.api as anatomist  # works with all implementations

# initialize Anatomist
a = anatomist.Anatomist()

# load a volume in anatomist
avol = a.loadObject('irm.ima')

win = a.createWindow('Axial')

# put volume in window
a.addObjects([avol], [win])

# change palette
avol.setPalette('Blue-Red-fusion')

print("object and window are not deletable since there is a reference on it. Execute 'del win' and 'del avol' to delete them.")

# display in matplotlib for sphinx_gallery
win.sphinx_gallery_snapshot()
import sys
if 'sphinx_gallery' in sys.modules:
    del win, avol