Index of /axon-6.0/en/processes
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Parent Directory
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zipDicom.html
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write_matrix2csv.html
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whitemeshwithoutdecimation.html
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whitemeshdepthmap.html
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whitemeshcurvaturemap.html
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ward_method_group.html
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voxelwise_t-test.html
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voxelByVoxelAnalysis_spm12.html
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voxel-wise-descriptive-stats.html
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voxel-wise-delta.html
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voxel-wise-bandwidth.html
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voxel-wise-adaptive_heatmap.html
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volumicSulcusSPAM.html
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volume_with_MNI_transform.html
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volumeToRoiGraph.html
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view_sulci_to_be_studied.html
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view_sulcal_imprint_mesh_list.html
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view_sulcal_imprint_mesh.html
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view_results.html
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view_jacobian_determinant.html
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view_displacement_on_surface.html
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view_displacement_grid.html
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view_bundles_to_be_studied.html
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verify_inverse_deformations.html
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validity_indexes.html
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update_dicom_tags.html
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updateDatabases.html
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updateDatabaseForSpecificSubjects.html
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uncompressGIS.html
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uncompressDiskItem.html
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traverses.html
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transform_volume_into_common_space.html
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transform_volume_between_subjects.html
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transform_multiple_volumes_into_common_space.html
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transform_mesh_into_common_space.html
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transform_mesh_between_subjects.html
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transform_graph_into_common_space.html
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transform_graph_between_subjects.html
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transform_bundles_into_common_space.html
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transform_bundles_between_subjects.html
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transform_between_subjects_pipeline.html
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transformRoi.html
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transformAPC.html
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transferSulciLabels.html
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trainsvm.html
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trainmlp.html
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training_GAN.html
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trainclassifier.html
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thresholdSimorphoOutputOnNNoutput.html
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threshold.html
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thickness_upw.html
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thickness_adv.html
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texture_operation.html
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testclassifier3.html
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testclassifier2.html
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testclassifier.html
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template_spherical_mesh.html
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talairachGrid.html
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t1pipeline07.html
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t1mriTissueMasks.html
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t1mapping_build_VFA.html
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swap_MRI_and_simulated_MRI.html
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surfacicSulciToLabelsVolume.html
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surfacearea.html
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surface_sulci_projection_nearest.html
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surface_sulci_projection_dpf.html
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surface_sulci_dpf.html
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sulcuslabelvolume.html
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sulcivoronoi.html
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sulciswitchmanuallabels.html
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sulciskeleton.html
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sulcilabelconsistencycheck.html
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sulcigraphmorphometryintersubject.html
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sulcigraphmorphometrybysubject.html
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sulci_weight.html
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sulci_viewer.html
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sulci_to_be_removed.html
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sulci_to_be_added.html
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sulci_not_to_be_pruned.html
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sulci_merging.html
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sulci_labeling_show_diffs_across_subjects.html
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sulci_labeling_diff_across_subjects.html
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sulci_label_translation.html
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sulci_deep_training.html
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sulci_deep_labeling.html
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sulciGraphVoronoi.html
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sulciDistanceToNeighboursStats.html
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sulciDistanceToLesionStats.html
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sulciDistanceToLesionBV.html
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sulciCurvatureStats.html
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sulcalindex.html
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sulcalPitsLabelizationFromSulci.html
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sulcalImprintGroup.html
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subsampling.html
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study_definition_manager.html
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stats_in_roi_generic.html
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spmpathcheck.html
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splitRegions.html
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spam_recognitionmarkov.html
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spam_recognitionlocal.html
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spam_recognitionglobal.html
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spam_recognition.html
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spam_install_models.html
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sortBvProc.html
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snapbase.html
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skullstripping.html
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single-permutation.html
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single-delta-permutation.html
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showModelWithSulci.html
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shiftVois.html
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set_image_normalization.html
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segmentcorpuscallosum.html
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segmentationScores.html
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roi_subcortical_wProbaMaps.html
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roi_subcortical.html
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resetInternalImageTransformation.html
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resample_to_image_space.html
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resample_texture_from_coords_fields.html
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resample_mesh_from_coords_fields.html
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resample_freesurfer_gyri_to_hiphop.html
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resampleToTemplateSpace.html
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resample.html
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reorientAnatomy.html
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removeTemporaryNifti.html
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removeDicomTags.html
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reduceTextureOnRois.html
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rectifyInternalTransfo.html
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recognition_error.html
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recognitionGeneralBoth.html
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recognitionGeneral.html
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recognition.html
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realignPET_spm12.html
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realignOffsetMeasurement.html
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readAPC.html
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projAverageVolumes.html
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probaToColorMap.html
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primate_ViewTopology.html
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primate_ViewSulciVoronoi.html
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primate_ViewSplitBrainMask.html
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primate_ViewSkullStrip.html
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primate_ViewSkeleton.html
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primate_ViewRoots.html
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primate_ViewProbaVolume.html
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primate_ViewParcellation.html
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primate_ViewNoBias.html
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primate_ViewMidInterface.html
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primate_ViewGreyWhiteMask.html
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primate_ViewFFDRegTemplate.html
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primate_ViewFFDRegLat.html
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primate_ViewFFDRegLabels.html
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primate_ViewFFDReg.html
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primate_ViewEvalPoints.html
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primate_ViewBrainMask.html
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primate_ViewBasicMixture.html
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primate_ViewAtlasRawPrior.html
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primate_ViewAtlasRawLat.html
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primate_ViewAtlasRawLabels.html
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primate_ViewAllSulci.html
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primate_ViewAffineReg.html
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primate_TalairachTransform.html
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primate_SurfacesAndSulciPipeline.html
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primate_SulciVoronoi.html
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primate_SulciSkeleton.html
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primate_SelectEvalPoints.html
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primate_SegmentationPipeline.html
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primate_Resample.html
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primate_QuickHistoAnalysis.html
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primate_PrepareForMorphologistPipeline.html
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primate_Prepare.html
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primate_PialMesh.html
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primate_Parcellation.html
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primate_MaskForRegistration.html
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primate_InvertT2.html
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primate_HemiSurfacesAndSulciPipeline.html
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primate_GreyWhiteTopology.html
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primate_GreyWhiteMesh.html
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primate_GreyWhiteClassif.html
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primate_CorticalFoldsThickness.html
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primate_CorticalFoldsGraph.html
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primate_BrainSegmentation.html
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primate_BiasCorrection.html
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primate_BasicMixture.html
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primate_AtlasRegistrationPipeline.html
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primate_AtlasFFD.html
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primate_AtlasApply.html
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primate_AtlasAffineMI.html
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preparesubject.html
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pqcThalamusWhiteMatterToPETRegistration.html
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pqcThalamusWhiteMatterStatisticsInPETSpace.html
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pqcThalamusWhiteMatterRatioPipeline.html
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pqcThalamusWhiteMatterMergeStatisticsInPETSpace.html
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pqcRealignPET_SPM.html
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pqcMeanSubject.html
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pqcExtractContours.html
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pqcDisplayQualityCheck.html
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pqcDisplayCheckFusion.html
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pqcDicomZipViewerSubject.html
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pqcComputeReferentials.html
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pqcComputeCTPaletteBounds.html
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pqcCleanDBSubject.html
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petPipelineWithoutMRI_spm12.html
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petPipelineWithoutMRI_spm8.html
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petPipelineWithMRI_spm12.html
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petPipelineWithMRI_spm8.html
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permutations_synthesis.html
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pdf_viewer.html
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patch_generation.html
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patch_assembling.html
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parallelRecognitionCCRT.html
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parallelRecognition.html
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parallel-permutations.html
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parallel-delta-permutations.html
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pairwise_distance_for_sulcus.html
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opal_pipeline_spm12.html
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opPiRR.html
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normative_brainvolumes_stats.html
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normalization_t1_spm12_reinit.html
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normalization_t1_spm12.html
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normalization_t1_spm8_reinit.html
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normalization_t1_spm8.html
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normalization_skullstripped.html
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normalization_aimsmiregister.html
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normalizationPipeline.html
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normalisation.html
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nlfit_smr.html
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newreferential.html
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multipleCoregisterSPM.html
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multiSubjectSulciSnapshotBoard.html
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mullerGartner.html
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mpegEncode_transcode.html
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mpegEncode_recmpeg.html
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mpegEncode_mencoder.html
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mpegEncode_ffmpeg.html
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mpegEncode.html
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moveVolumePipeline_spm12.html
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moveVolumePipeline_spm8.html
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morphometry.html
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morphologist_qc_table.html
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morphologist_capsul.html
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morphologist_2015.html
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morphologist_2013.html
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morphologist_2012.html
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morphologist_2011.html
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morphologistProcess.html
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morphologist.html
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morphologist-ui_database.html
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morphologist-ui.html
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morpho_report.html
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morpho_intersubject_status.html
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morphoModel.html
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morphoBasic.html
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morphPipeline.html
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modifyDicoms.html
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modelgraphlearn.html
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modelgraphinfo.html
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modelgraphcreation.html
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mni_from_talairach.html
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ml_weighting_random_forest.html
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ml_segmentation_pipeline.html
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ml_reshape.html
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ml_random_forest_pipeline.html
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ml_random_forest_CV_pipeline.html
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ml_parallel_features_extract.html
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ml_parallel_classify.html
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ml_optimal_threshold.html
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ml_nearest_neighbors.html
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ml_multi_images_features_extract.html
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ml_generate_thumbnails.html
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ml_features_extract.html
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ml_fast_modeling.html
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ml_factorial_design.html
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ml_evaluation_select.html
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ml_evaluation.html
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ml_dictionary_learn.html
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ml_classify.html
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ml_biovision_validation.html
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ml_SVM.html
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ml_RandomForest_CV.html
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ml_RandomForest.html
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ml_PCA_visu.html
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ml_Logit_select.html
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ml_Logit.html
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ml_Adaboost_CV.html
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minctracc.html
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meshSmooth.html
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merge_labels_from_texture.html
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merge_datscan_results.html
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mergeTripleLineFWHM.html
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mergeDatScanPhantomData.html
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mergeCsvProducedByGeDevice.html
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mergeAllPetDataInXls.html
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mergeAllPetData.html
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matrixInvert.html
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manualRegistration.html
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manageSubjectGroup.html
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loocv.html
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laplacian.html
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compute_average_brain.html
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compute_Tstat.html
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computeTissueMask.html
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computeStatInVolume.html
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computeOneTissueMask.html
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computeIntensityNormalization.html
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computeBrainLabelsData.html
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computeAverageHistogram_new.html
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completeT1mriAcquisitionData.html
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completePetAcquisitionData.html
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completeCtAcquisitionData.html
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compareDicomAndSpmTransformations.html
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combine_bundles.html
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color_normalization_GAN.html
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clustering_scores.html
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cluster_detection.html
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clean_side_error.html
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cleanDatabase.html
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classifiersvm.html
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classifiermlp.html
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chooseBestRecognition.html
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check_spam_models.html
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checkRegistrationViewer.html
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checkRawDataPipeline_pet.html
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checkFWHMInformations.html
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checkDatabase_batch.html
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checkDatabase.html
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categories/
2025-12-12 14:05
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bundles_weight.html
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bundles_to_be_removed.html
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bundles_not_to_be_pruned.html
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bundles_merging.html
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bundles_label_translation.html
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buildTemplate.html
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brainvolumes.html
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bioModelTestParameters.html
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bioGenerateDiceCartography.html
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bioAggregateDiceCartography.html
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bias_correction_from_b1map.html
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baby_histo_analysis.html
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average_silhouette_width.html
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average_cortical_ribbon.html
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averageSulci.html
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assemblynet_generic.html
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assemblynet.html
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asegstats.html
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aparcstats.html
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antsRegistrationSimplified.html
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antsApplyTransforms.html
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anatomistreusablewindow.html
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anatomist_view_group_label_texture_group_pipeline.html
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anatomist_view_group_label_texture.html
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anatomist_view_connectivity_texture_atlas_pipeline.html
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anatomist_view_connectivity_texture.html
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anatomist_view_connectivity_roi_texture_atlas_pipeline.html
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anatomist_view_connectivity_roi_texture.html
2026-01-09 10:52
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anatomist_view_conn_matrix_atlas_pipeline.html
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anatomist_view_colormap.html
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anatomist_view_coloring_map.html
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anatomist_show_profiles_specific_element_atlas_pipeline.html
2026-01-09 10:52
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anatomist_show_profiles_specific_element.html
2026-01-09 10:52
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anatomist_plotting_group_mask.html
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anatomist_plotting_connectivity_profiles.html
2026-01-09 10:52
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anatomist_plotting_connectivity_parcellation.html
2026-01-09 10:52
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anatomist_plotting_concatenated_parcellations.html
2026-01-09 10:52
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anatomist_clusters_inspect.html
2026-01-09 10:52
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anatomistViewReorderMatrix.html
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anatomistViewConnmatrix.html
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anatomistViewConnectivityTextureSmallBrain.html
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anatomistViewConnectivityRegionSmallBrain.html
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anatomistViewConnectivity.html
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addborder.html
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add_background_noise.html
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adaptive-filter.html
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acpcOrNormalization.html
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WhiteMeshCurvatureEstimation.html
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VolumicTest.html
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VolumicDeviation.html
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VolumicAverage.html
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VolumeUnstack.html
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VolumeStackSlices.html
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VolumeSeriesToSingleFile.html
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VolumeResizing.html
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VolumeResampling.html
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VolumeROIAnalysis.html
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VolumePreprocess.html
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VolumeInterlace.html
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VolumeHeatMapGeneration.html
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VolumeAxisPlot.html
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Volume3DHierarchicalStatisticGeneration.html
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VipSplitBrain.html
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VipHistoAnalysis.html
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VipGetBrain.html
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VipBiasCorrection.html
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ViewPNG.html
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ViewInHippocampicReferential.html
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ViewHTML.html
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ViewCSV.html
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VarianSequencePreprocess.html
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Unstacking.html
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TransformationsEvaluationBatch.html
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TransformationsEvaluation.html
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TransformationCompose.html
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TransformationApplicationParallel.html
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TransformationApplication.html
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ThresholdTexture.html
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Theoretical_phantom_activity_calculation.html
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TexturesAsTimeTexture.html
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TextureValueByClick.html
2026-01-09 10:52
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Texture2FlatMesh.html
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TexSpam.html
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TexRegul.html
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TexMorphomat.html
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TexLinearComb.html
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TemplateRegistrationPipeline.html
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TemplateGenerationPipeline.html
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TalairachTransformationFromNormalization.html
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TalairachTransformation.html
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T1BiasCorrectionGeneral.html
2026-01-09 10:52
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T1BiasCorrection.html
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SurfaceActivationsViewer.html
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SulciSPAM.html
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SulcalinesExtraction_options.html
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SulcalinesExtractionRight.html
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SulcalinesExtractionLeft.html
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SulcalinesExtractionCombined.html
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SulcalinesExtraction.html
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SulcalPitsExtraction.html
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SulcalParcellation.html
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SubvolumeStacking.html
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SubvolumeExtraction.html
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SubcorticalFromFreesurferToMarsAtlas.html
2026-01-09 10:52
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StructuralGroupAnalysis.html
2026-01-09 10:52
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StackingPhotographs.html
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StackingIndividualSlices.html
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Stacking.html
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SplitBrainGeneral.html
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SplitBrain.html
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Smoothing.html
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SingleFileToVolumeSeries.html
2026-01-09 10:52
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SimpleRoiEditor.html
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ShowScalarFeatures.html
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SeriesConverter.html
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SendTextureToAtlas.html
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SegmentationModelVisualization.html
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SegmentationModelLearning.html
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SegmentationModelClassification.html
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SegmentationModelClassSelection.html
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Seg_cortex_wProbaMaps_Simplified.html
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Seg_cortex_wProbaMaps.html
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Seg_cortex.html
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SUVNormalization.html
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SPMtransformToAims.html
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SPMtissuesvolume.html
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SPMsn3dToAims.html
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SPMnormalizationPipeline.html
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SPMcovariateManager.html
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SPM12twoSampleTTest_generic.html
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SPM12resultsReport_generic.html
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SPM12pairedTTest_generic.html
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SPM12oneSampleTTest_generic.html
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SPM12modelReview_generic.html
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SPM12modelEstimation_generic.html
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SPM12imageCalculator_generic.html
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SPM12deformations_generic.html
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SPM12contrastManager_generic.html
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SPM12composition_generic.html
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SPM12Smooth_generic.html
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SPM12SliceTiming_generic.html
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SPM12ShootWriteNormalised_generic.html
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SPM12Serial_generic.html
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SPM12Serial.html
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SPM12Segment_generic.html
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SPM12Segment.html
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SPM12RunShoot_generic.html
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SPM12Reorient_generic.html
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SPM12RealignEandR_generic.html
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SPM12Pairwise_generic.html
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SPM12Pairwise.html
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SPM12OldNormaliseWrite_generic.html
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SPM12OldNormaliseEstimate_generic.html
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SPM12OldNormaliseEandW_generic.html
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SPM12NormaliseWrite_generic.html
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SPM12NormaliseEandW_generic.html
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SPM12DARTELNormaliseToMni_generic.html
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SPM12DARTELCreateWarped_generic.html
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SPM12DARTELCreateWarped.html
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SPM12DARTELCreateTemplates_generic.html
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SPM12DARTELCreateTemplates.html
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SPM12DARTELCreateInverseWarped_generic.html
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SPM12CoregisterEstimate_generic.html
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SPM12CoregisterEstimate.html
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SPM12CoregisterEandR_generic.html
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SPM12CAT12Segment_generic.html
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SPM12CAT12Segment.html
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SPM8twoSampleTTest_generic.html
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SPM8resultsReport_generic.html
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SPM8pairedTTest_generic.html
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SPM8oneSampleTTest_generic.html
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SPM8modelEstimation_generic.html
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SPM8imageCalculator_generic.html
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SPM8deformations_generic.html
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SPM8contrastManager_generic.html
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SPM8VBMSegmentation_generic.html
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SPM8VBMSegmentation.html
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SPM8Smooth_generic.html
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SPM8SegmentationChoice.html
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SPM8RealignEandR_generic.html
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SPM8NormaliseWrite_generic.html
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SPM8NormaliseEstimate_generic.html
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SPM8NormaliseEandW_generic.html
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SPM8NewSegment_generic.html
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SPM8NewSegment.html
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SPM8HDW_generic.html
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SPM8DARTELNormaliseToMni_generic.html
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SPM8DARTELCreateWarped_generic.html
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SPM8DARTELCreateWarped.html
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SPM8DARTELCreateTemplates_generic.html
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SPM8DARTELCreateTemplates.html
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SPM8DARTELCreateInverseWarped_generic.html
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SPM8CoregisterEstimate_generic.html
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SPM8CoregisterEandR_generic.html
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SPECTPQCPipeline.html
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SPCN.html
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SPCN-02-model_application.html
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SPCN-01-model_estimation.html
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RightHemisphereProcess.html
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ResamplingListDataFFDApply.html
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ResamplingListData.html
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ResampleROI.html
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ResampleInTalairach.html
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ReplaceLevel.html
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ReplaceCharInPaths.html
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RenameImageSeries.html
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RemeshToAtlas.html
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RemeshFromSphere.html
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RegistrationPipeline_v2.html
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RegistrationPipeline.html
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Register3DMutualInformation.html
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ReferenceRegistrationPipeline.html
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RandomEffect.html
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ROISymetrizationAnd3DAnalysis.html
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ROIGraphMeshRendering.html
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ROIDrawing.html
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ROIBasedAnalysisPipeline_spm12.html
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ROIBasedAnalysisPipeline_spm8.html
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RGB_roi_fill.html
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RGBVolumeCreation.html
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RGBComponentsIntensityNormalization.html
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QC_rawdata.html
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ProjectionUsingKernels.html
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ProjectTextureOntoAtlas_old.html
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ProjectTextureOntoAtlas.html
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Primatologist.html
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PrimalSketchFromSPMt.html
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PreprocessPETPipeline_spm12.html
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PreprocessPETPipeline_spm8.html
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PostProcessingPhotos.html
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PolesTexturesSanityCheck.html
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Point_Spread_Function_1D.html
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PixelSizeCalibration.html
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PitsTextureSmoothing.html
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PitsDensityMap.html
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PipelineBaby_wProbaMaps.html
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PipelineBaby.html
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PhotographicVolumePreprocessing.html
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PhotoPipeline.html
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PetWithoutMRI_QC.html
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PetWithMRI_QC.html
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PetLongQcComparisonSUV.html
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PetLongOverlaySnap.html
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ParcelsVolume.html
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ParcelsTextureFromCoordinates_PNH.html
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ParcelsTextureFromCoordinatesHeschl.html
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ParcelsTextureFromCoordinates.html
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ParcelsArea.html
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ParcellationRight.html
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ParcellationLeft.html
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ParameterizeUnconstrainedHarmonicRight.html
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ParameterizeUnconstrainedHarmonicMultiplePaths.html
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ParameterizeUnconstrainedHarmonicLeft.html
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ParameterizeUnconstrainedHarmonic.html
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ParameterizeSulcus2015.html
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ParameterizeSulcus.html
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ParameterizeHemisphereRight.html
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ParameterizeHemisphereLeft.html
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ParallelVolumeSplit.html
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ParallelVolumeConvert.html
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ParallelThreshold.html
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ParallelSubSampling.html
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ParallelSmoothing.html
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ParallelReplaceLevel.html
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ParallelRegistration.html
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ParallelMask.html
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ParallelLinearComb.html
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ParallelIndividualizeLabeledImage.html
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ParallelFlip.html
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ParallelConnectComp.html
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PairwiseDistanceComponent.html
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PairwiseDistance.html
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PairwiseDice.html
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PVCPipeline.html
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PSViewer.html
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PETScanAtlasAnalysis.html
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PETPQCPipeline.html
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NuclearImagingAcquisition_QC.html
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NobiasHistoAnalysis.html
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MultipleRegistrationPipeline.html
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MultipleOpening.html
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MultipleHistologicalPipeline.html
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MeshArea.html
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MaskGeneration.html
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MaskFromSPMt.html
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MaskApplication.html
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MakeAverageMesh.html
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MRIPETRegistration.html
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MITransformationEstimation.html
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LinearTransformationApplication.html
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LinearRegistrationPipeline.html
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LinearCombination.html
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LabelExtraction.html
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KMeansStack.html
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Jaszczak_practical_RC_Prieto_several_means_iteration.html
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Jaszczak_practical_RC_Prieto_several_means.html
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Jaszczak_display_PVC_QC.html
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Jaszczak_ROI_Creation.html
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Jaszczak_PVC_GTM_sGTM_1D_Kernel_iteration.html
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JZKPipeline.html
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IntraVolumePropagativeSliceRegistration.html
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IntersectROIMaskWithMatterMask_generic.html
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InterVolumesSliceCoregistration.html
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IntensityNormalization.html
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IntensityNormalisationPETPipeline_spm12.html
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IntensityNormalisationPETPipeline_spm8.html
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InsularPoleProjectionRight.html
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InsularPoleProjection.html
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InsularPoleFromManualDrawing.html
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IndividualizingSlices.html
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IndividualizingAndStackingMultipleSlices.html
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IndividualizeLabeledImage.html
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ImportT1MRI_multiple.html
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ImportT1MRI_longitudinal.html
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ImportScan.html
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ImageCalculator.html
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HistologicalPipeline.html
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Histological3dAnalysisPipeline.html
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HistogramAnalysis_new.html
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HistoAnalysisGeneral.html
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HipHopCorticalParameterization.html
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HierarchicalRoiFeatures.html
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HierarchicalRoiAnalysis.html
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HemisphereProcess2012.html
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HarmonicMappingOrtho.html
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HarmonicCoordsToSphere.html
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Group_watershed.html
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GridGeneration.html
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GreyWhiteMesh.html
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GreyWhiteInterfaceGeneral.html
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GreyWhiteClassificationHemi.html
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GreyWhiteClassification.html
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GetHemiSurfaceGeneral.html
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GeneralImport.html
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GaussianSmoothingPipeline.html
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GaussianSmoothing.html
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Fus_Det.html
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FusDet_SegWM_wProbaMaps.html
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FlipApplication.html
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FeaturesProcessingParallel.html
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FeaturesMapProcessing.html
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FeatureExtraction.html
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FastMarching_AP_Segmentation3D.html
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FastMarching_AP_Segmentation2D.html
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FSLtransformToAims.html
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DigitalAtlasRegistrationOnVolume.html
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DigitalAtlasHierarchyGenerate.html
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DicesTableGenerator.html
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DepthPotentialFunction.html
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DLSegmentationPostProcessing.html
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DLSegmentationModelInference.html
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CorrelationProcessing.html
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CorrectShiftStack.html
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CoordinatesFromHipMapping.html
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CoordinatesFromHipHopMapping.html
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ColorCombinator.html
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BrukerSequencePreprocess.html
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BoundingBoxCziGeneration.html
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BMTransformationEstimation.html
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AverageVolumes.html
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AverageSulcusMorphologicalCurves.html
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AverageFunctionalInGyri.html
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AnatomistShowLatitudeCoordinatesTexture.html
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